Etheostoma spectabile (orangethroat darter): 116687674
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Entry
116687674 CDS
T08457
Symbol
fbxo42
Name
(RefSeq) LOW QUALITY PROTEIN: F-box only protein 42
KO
K10317
F-box protein 42
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116687674 (fbxo42)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
116687674 (fbxo42)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_ATRN-LZTR1
Kelch_3
Kelch_4
Kelch_1
Kelch_5
Kelch_6
Kelch_2
NANM
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
116687674
NCBI-ProteinID:
XP_032369117
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All DBs
Position
4:complement(17798716..17806137)
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AA seq
705 aa
AA seq
DB search
MSRTPDNEDGCFVAMDTEDDGADHAGITEEEEANMGSCRQEGNMDSSAKGGGRTMVELPE
EVLEYILSFLSPYQEHKTAALVCKQWYRLIKGVAYQCYHGFLRAVQEGNIQWESRTYPYP
GTPITQRFSHSACYYDSNQSMYVFGGCTQSSCNAAFNDLWRLDLNSKEWIRPLASGSYPS
PKAGATLVMHKDLLVLFGGWTRPSPYPLHQPERFFDEIHTYSPSKNWWNCIVTTHGPPPM
AGHSSSVIGNTMVVFGGSLGARQMSNEVWVLDLEQWSWSKPPISGPSPHPRGGQSQIVID
DQTLLILGGCGGPNALLKDAWLLHMDAPPWRWQQLQVENEDHGAPELWCHPACRVGQCVV
VFSQAPSGRAPLSPSLNSRPSPISATPAPLGPEPPSLRSQSPVRSGAAGVVLGAVEEAPC
VNGRWGTLRPRPSARGXAREGSPSSSQQPSPSQGPDSPPLPPLPQLLNGSSPSPRTSPAQ
AASPSSRPLPLASTDYGWESPPSAGHHPEVPCTNGLHTPPAGSPHTPPGAVSPAALRRSL
EAVKNKSSSSLPSSSSLSSLQTQGSSPGGGSGGGGGPPGTPPSSSSSPPQAAGADGHAIP
PIARRLGHHPPQSLNVGKPLYQSLNCKPMQMYVLDVSRAKSAGVVSWRVYGNGTPAAVTG
PPETSLHTVVQGRGELIIFGGLMDKKQNVKYYPKTNALYFVRAKR
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcaccccggataatgaggatggatgctttgttgccatggatacagaggacgat
ggtgcagaccatgctgggataacagaggaagaagaggcaaacatggggtcttgtcgacaa
gaagggaacatggacagtagtgccaaaggaggtgggagaacaatggtggagttgccagag
gaagttcttgaatatatcctgtccttcctctcaccgtaccaggagcacaagactgctgca
cttgtatgtaagcagtggtatcgcctcattaaaggtgttgcttatcagtgctaccacggt
ttcttgagagctgtccaggagggaaatatccagtgggaaagtcgcacatacccatatcca
ggaaccccaatcacccagcgcttctcacacagtgcatgttattatgactcaaaccagtcc
atgtatgtgtttgggggttgcactcagagtagctgtaatgctgccttcaatgatctgtgg
agacttgacctcaacagcaaggagtggatccgccctttagcatcaggctcttatccatct
cctaaagctggggcgactctagtaatgcacaaagatctgttggtgctgtttgggggatgg
acacgccccagcccatatccactgcaccaaccagaaaggttttttgatgaaatccacacc
tactcgccttcaaagaactggtggaactgtatagtgacaacacatgggcctccccctatg
gctggccactcttcctctgtgattggaaacaccatggtggtgtttgggggatcactagga
gcacggcaaatgagtaatgaagtctgggttctggatctggagcagtggtcctggtctaaa
ccacccatatctggcccatcacctcatccgcgaggaggtcaatcacaaattgtgattgac
gatcagacgttgctcatcttgggaggctgtggcggccctaatgcactccttaaagatgcc
tggctcctccacatggacgcaccaccatggcggtggcagcagttgcaggtagaaaacgag
gaccatggggccccggagttgtggtgtcacccggcttgtagagtgggccagtgtgtggtg
gttttctcacaggctccatctggccgtgcaccgctcagcccaagtcttaactctcggccc
tcccccataagtgccacacccgcccctttgggtcccgaaccgccttccctgcgctctcag
tctcctgttcggagtggagccgccggtgttgtcctgggagctgttgaggaggctccgtgt
gtgaacggccggtggggcacgctgagacctcggccttcagctagagggngtgccagagaa
gggagcccatcctcatcccaacagccgtctccatcacaaggccccgacagccctcctctt
cctccacttccccagcttttaaatggatcctccccttcaccaaggaccagcccagcacag
gctgcatctccttcctctcgccctctcccacttgcttccacagactatggctgggagtct
cccccttctgccggtcaccaccctgaggtgccctgcaccaacggcctgcatacacctcct
gcaggctccccacacactcccccaggtgccgtgtcccctgctgccttacgacgaagtctg
gaggcagtgaaaaacaaatcttcctcatctttaccatcttcatcgtcattgtcttccctt
cagacacaggggtcttctcctggaggaggaagtggtggaggagggggtccacctggaacc
cctccatcatcatcctccagccctccacaggctgctggagctgatggacatgctatccca
cctattgcacgccgtcttggccatcacccaccccaaagcctgaacgtagggaaacctctc
taccagtctctcaactgcaagcccatgcaaatgtatgtgttggatgtgtccagggccaag
tctgctggggtggtgtcctggagagtttatgggaacgggactcctgctgcggttacaggg
cctcctgagaccagccttcacactgtggtacagggcaggggagagctcatcatatttggg
ggcctcatggacaagaaacagaatgtgaagtactaccctaaaacaaacgccttgtacttt
gtacgagctaaaaggtaa
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