Etheostoma spectabile (orangethroat darter): 116687701
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Entry
116687701 CDS
T08457
Symbol
ssu72
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase SSU72
KO
K15544
RNA polymerase II subunit A C-terminal domain phosphatase SSU72 [EC:
3.1.3.16
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116687701 (ssu72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116687701 (ssu72)
03019 Messenger RNA biogenesis [BR:
esp03019
]
116687701 (ssu72)
Enzymes [BR:
esp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
116687701 (ssu72)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
116687701 (ssu72)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
116687701 (ssu72)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssu72
Motif
Other DBs
NCBI-GeneID:
116687701
NCBI-ProteinID:
XP_032369165
LinkDB
All DBs
Position
4:complement(17872423..17877403)
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AA seq
194 aa
AA seq
DB search
MPSHPLRVAVVCSSNQNRSMEAHSILSKRGFDVRSFGTGSHVKLPGPAPDKPNVYDFKTT
YVQMYNDLVRKDKELYTQNGILHMLDRNKRIKSKPERFQSCKEKFDLVITCEERVYDQVL
EDLNSREQETLQPVHVINVDIQDNHEEATLGAFLICELCQCIQHTEDMEDEMDELIQEFE
EKSNRPFLHTVCFY
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgccgagccacccgctgcgagtagcggttgtgtgctcgagcaaccagaaccgcagtatg
gaagcgcacagtatcctcagcaaacgtggatttgatgtgcgttcatttgggacagggtct
catgtgaagctacccggtcctgccccggataagccaaatgtgtatgacttcaaaacgaca
tatgtacagatgtacaacgacttggtccgcaaggacaaggaactatacacacagaatggc
atcctgcacatgctggaccgcaacaagcgcatcaaatcaaagccagagcgctttcaaagc
tgcaaggagaagtttgacctggtcatcacatgtgaagagagagtctatgaccaagtacta
gaggatctgaattcaagagaacaggagactctgcagcctgtgcatgttatcaatgtagac
attcaggataaccacgaggaagccacgctgggcgccttcctcatctgtgagctgtgtcaa
tgtatccagcacactgaggacatggaggatgaaatggatgagctcatacaagagtttgag
gagaagagcaacaggccttttcttcacactgtctgtttctactga
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