Etheostoma spectabile (orangethroat darter): 116687730
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Entry
116687730 CDS
T08457
Symbol
znfx1
Name
(RefSeq) NFX1-type zinc finger-containing protein 1 isoform X1
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
116687730 (znfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
ZnF_RZ-type
AAA_19
AAA_30
ResIII
DEAD
AAA_22
PhoH
SLFN-g3_helicase
UvrD-helicase
AAA_25
nSTAND3
AAA
Motif
Other DBs
NCBI-GeneID:
116687730
NCBI-ProteinID:
XP_032369208
LinkDB
All DBs
Position
4:9021789..9040922
Genome browser
AA seq
2005 aa
AA seq
DB search
MERPTSTTGSRGPSPGPPGADNGQNENASGNSGKQRKRHGSNQAKRDETDGGGVGVGIRG
RGRRRGRGGPDPGNGVERGAGGEGRKETDGGGGGEGGRGRGGAAGRGRGADAGRGRGGAA
DAGRGRGAADVGRGRGAADVGRQGEGARQRVGGRGRGGNGGERAERGGVGRNGQQGAAER
EGARRRMAGMGASRGGHSVDGRGGERRDVGDRQERNGGRSNSTGRVWAPNGHRLGYKTLE
ELSGEDPSVVAITLSSHPGLPEVLRETQMRQDLVELLCLVLSKAFKGHTERCTLQHLAGI
IKDSGFFRIVLPYYLGGMGSEFNPVRRAQYPHHLENILAILSKVLSIFPASSMQAVSLVL
TVLNASINSLRAKGVDIQPETEESVKSFQTLIQHLEERSSQGTLRSDKDTYALLPTGGEN
PGEEEQEDFRTISIYPTPEEFHQEHRPFLRPNLTSQRYTNTHVYLDTHFRLLREDFVRPL
REGIQQLLRDKMDKGRRDNSLKTKRFDDIRVYLDTKVVVPRCTSSGLAYIVQFDNKPLKF
VVWQNSKRLIYGSLVCLSCDNFESFLFATVSDRDPKQLRKGQVQIAFTEESRLKLASIEK
DQSFLMIETTAYFEAYRYVLEGLQEQEEDKLPFQRYIVECSTDVHPPAYLRRRDIYDLSS
VAHPEHKDGIKPFHSLEARAWPSMEKLGLDESQMRAFQLALTKELTIIQGPPGTGKTYVG
LKIAQALLTNQDLWRDGAPMLVVCYTNHALDQFLEGIHKFLPKGIVRVGGRSNSEILKRF
NLRELTRSRDFRQKLPSHLSRAYNQIYKQLCEEERVIQSQSMQLECSLKGVLREVSLRNF
ISSRHWDNLHNQPPTQDDFVTYGEKKSSLMMEWLGIGSTFFLQRETEAADRNEAAEEAME
LDEEDGLIEIEEEAELIQADRIIDDNIGPKGGRDGKKNGDMEKALRGVEDLMLAMNLDEA
EIQAEQSEEGWEMQRAQKRKLKNKIRRELRNNSVMTKEEEDAVWDIWTLSQPDRWRLYRL
WVARYRLELCAKILKSEEGYQNAVDRLADVKRAENLCLLKEATVIGMTTTGAAKFRKVLQ
KVCPRLVIVEEAAEVLEAHTITTLSQACQHLILIGDHQQLRPSATVYELAKNFNLEMSMF
ERLVNMGLPFVRLNYQHRMRPDIARLLTPHIYAELENHPSVLDYEDIKGVDTNLFFVEHN
HLEEEIKDGKSHQNKHEAMFVVSLCRYLIYQDYKPEQITILTTYTGQLHCLRSLMPASEF
NGVKVHVVDKYQGEENDIVLLSLVRSNRQGKVGFLNIPNRVCVAFSRAKKGLYCIGNQSM
LSQVELWSNIFHTLREKDQVGSALTLCCQNHPDRQIKASRADDFKQAPEGGCTKPCEFRL
ECGHVCTRICHPSDPEHKKYLCHKDCQKILCDQGHRCTLLCHEECPKKCPVKVEKIIPQC
QHTQMVPCHKDPQTFTCKKPCQKLLPCGHPCDSFCGEPCTKRCMVKVTLKLKCGHSQQDA
CFYQTYTEQPECRTPCQKQLKCGHACHGTCGKCFQGRFHYPCLHKCDRLLICSHKCREPC
TRDCPPCQEPCENCCVHSKCMKPCGQPCAPCIEPCAWQCPHQSCSKLCYEPCDRPPCTQP
CAKTLDCGHPCIGLCGDKCPSKCRICNHDEVTEIFFGTEDEPEAFFIQLEDCGHIIEYTA
MDQYMGMDDIQLANGGEQVAIKLKECPKCRTPIRKNLRYGSHINRSLSEIEMVKVKINGR
QEDIEEHRKALQNQWEDNLLLHEMHRQEDYMRINDTLERKNLTEKHLWVLENKMDFLIRV
AKLKKAQMENMSSMLSSRLGKYFKEFEHWLNKWHQKFTDQQVFDLQRELRRITLLTELNA
HCHVAEMRGQSDKIISEVQTITKVLEKFGQFTEQDQDGVEEAMKELDKKLPLTGLGINEE
ERKMIVSTMGKRPGHWYKCPNGHVYLIDDCGGAMESRRCPDCEATIGGGNHRLASGNQVA
SEMDGAQHPAWSEANNILNFDQHDF
NT seq
6018 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaccgacttcaacaacagggagcagaggacctagcccaggtcccccaggggct
gataatggccaaaatgaaaatgctagtggaaacagcggtaaacaaagaaaaagacatggg
agtaaccaagccaaaagggatgagacagatggaggaggagtaggtgttgggatccgtggg
agaggcagaagaagaggaagaggaggaccagacccaggaaatggggtggaaagaggtgca
ggaggagaaggcaggaaggagacagatggtggaggaggaggggaaggggggagaggaaga
gggggagcagcaggcagaggaagaggagcagatgcagggagaggaagaggaggggcagca
gatgcagggagaggaagaggagcagcagatgtagggagaggaagaggagcagcagatgta
gggagacagggagaaggagccagacagagagtaggtgggagggggagaggtggaaatgga
ggagaaagggcagagagaggtggggtaggaagaaacggacagcaaggtgcagctgaaaga
gaaggagctagaaggaggatggcaggaatgggtgcaagcaggggaggacatagtgtggat
gggagagggggtgagagaagagatgtgggagacaggcaagagagaaatggagggagatcc
aattctacaggcagagtctgggcaccgaatggtcatagattgggctataaaacactggaa
gaactctctggagaagatccatctgtagtggccatcaccctttcctctcaccctggcctt
cctgaggtcctgcgcgagacacaaatgaggcaggaccttgtcgaactcctctgcctggtg
ctgagtaaagccttcaaaggacatacagaaagatgcaccctgcagcacctggccggcatc
ataaaagattcagggttcttccgcatcgtcctgccctactatcttgggggcatggggtca
gagttcaaccccgtccgcagggcacagtacccacaccacctggaaaacatcctggctatt
ctgtcaaaggtcctcagcatctttcctgctagctctatgcaggctgtgagtttggtgctg
acggtgctcaatgcctccatcaacagcctgagggcaaaaggagtggacatccagcctgaa
acggaggagagcgtgaagagttttcagaccctgatccagcacctcgaggagagatcctcg
cagggtaccctgcgctcagacaaggacacttatgccctcctacccactggaggtgaaaac
ccaggtgaagaagagcaggaagatttcaggaccatatctatctacccaactcctgaggag
ttccatcaggaacacaggccctttcttagacccaacctcacttctcagcgctacacaaac
acccacgtctaccttgacacgcacttccggctgctgagagaggactttgtgcggccactc
cgtgaggggatccagcaattgcttcgggacaaaatggacaaggggaggagagataattca
ctgaagacgaagcgctttgatgacatcagagtgtatttggacacaaaagtggtggtaccc
aggtgcacgtcgagtggccttgcctacatagtccagtttgacaataagccacttaagttt
gtggtctggcagaactccaagaggctgatctacgggtccctggtctgtctgtcgtgcgat
aattttgagagcttcttatttgccacagtgtcagatcgggacccaaaacagctgcgtaag
ggacaggtccagattgcctttactgaagaaagcagattgaagttggccagcattgagaaa
gatcaatcgttcctgatgattgagaccactgcctactttgaggcctatcgctatgttcta
gagggcctacaggagcaggaggaggacaaactgccctttcagaggtacatcgtggagtgc
agcacagacgtgcatcccccagcttatctgcggagaagagatatttatgacctgtcatct
gtcgctcaccctgagcataaggacggtataaagccctttcatagcctggaggcacgggcc
tggccgagcatggagaagctggggctggatgagtctcagatgagagccttccagctggcc
ctcacaaaggagctgaccatcatacagggacctcctggcactggaaaaacctacgttggc
cttaagattgctcaggctctgttgacaaatcaggatctttggagagacggggctccgatg
ctggtagtgtgttacactaaccatgccctggatcagttccttgagggtattcataaattt
ctgccaaaggggatagtgagagtaggaggacgcagcaacagcgagatcctgaagcgtttc
aatctaagggagctgacccgctcacgtgactttagacagaagctgccgtctcacctgagt
cgagcatataatcagatttacaagcagctgtgtgaggaggagagggtgatccagagtcag
agcatgcagctggagtgttctctgaaaggcgtcctgcgtgaagtctccttacgcaacttt
atttcatccagacactgggacaatctacacaaccaaccaccaacacaggatgattttgtg
acctatggtgagaagaagtccagtctgatgatggaatggttgggtatcggttccaccttc
ttcctgcagagggagacagaggctgcagatagaaatgaagcagcagaggaagcaatggag
ctggatgaggaggacggcctcattgaaatcgaagaggaagcagaactgatccaggcagat
cggattattgatgacaacattggtcccaaaggtggtagagatggcaaaaagaacggagat
atggagaaggctctcagaggggtagaggacctgatgctagctatgaacctggatgaagct
gaaatacaggctgagcagagcgaggaaggatgggagatgcaacgggcccagaaaagaaag
ctgaaaaacaaaatcaggagagagctcaggaataactcggttatgactaaagaagaggaa
gatgctgtctgggatatttggaccctcagccagccggacagatggagactctatcggttg
tgggtggcacgttacaggttagaactttgtgccaaaatcctaaagagtgaagagggttat
cagaacgcagtggacagattggctgatgtaaaacgtgcagagaacctctgtctcctgaag
gaagccacggttattggcatgacaacaacaggggcagccaagttccgtaaagttctgcag
aaggtgtgtccacgtctggtgattgtagaagaggctgcggaggttctcgaggcccacacc
atcaccacactgagccaagcatgccaacacctcatcctcatcggagaccatcagcagcta
cgccccagtgccacagtatatgaacttgctaagaacttcaacctggagatgtccatgttt
gagaggctggtgaacatgggacttccttttgtcagacttaactaccagcatcggatgagg
ccagacattgcccgtcttctgaccccacacatctacgcagagctagaaaatcatccctct
gtgttggactacgaagatattaagggcgtggataccaatttattctttgtggagcacaac
cacctagaagaagagattaaagatggaaaaagccatcagaacaaacatgaggcaatgttt
gtagtctctctttgccgctatcttatctatcaggactacaaaccagagcaaattaccatc
ctcacgacctataccgggcagctccactgcctgcgcagtctcatgcctgccagcgagttc
aatggggtcaaagtgcatgtagtggacaagtaccagggagaagagaatgatattgtcttg
ttgtctctggtccgcagcaaccggcagggtaaagttggctttttgaacattcccaatcga
gtctgtgtagctttttctcgtgccaaaaaaggtctgtactgtattggcaatcagtcaatg
ctgagccaagtcgaactgtggagcaacatcttccacaccctgagggagaaggaccaggtt
gggagtgctctgaccctgtgctgtcagaatcatccagatcgacaaataaaagcctctcgt
gctgatgatttcaaacaagcccctgaggggggctgcaccaagccttgtgagttccgtttg
gaatgtggccatgtttgcacacgtatctgccacccctccgacccggaacacaagaagtac
ctgtgtcataaagactgccagaagattttatgtgatcaaggtcacaggtgcacccttctg
tgccatgaagaatgcccaaagaaatgtccagtgaaggttgagaagatcataccccagtgt
caacacactcagatggttccttgccacaaggacccgcagacattcacatgcaagaagcct
tgccagaagctgcttccctgtgggcatccgtgtgattcattctgtggggaaccatgcact
aaacggtgcatggtgaaggtcaccttaaaactaaagtgtggccacagtcagcaagatgca
tgcttttaccaaacttacacagagcagcctgaatgtaggaccccttgtcagaaacagcta
aaatgtggccatgcctgtcatggtacctgtggcaagtgttttcagggaaggtttcattac
ccgtgtttgcacaaatgtgaccgtctcctgatttgctctcacaagtgcagggagccttgc
actcgtgattgccccccctgtcaggaaccatgtgagaattgctgcgtgcacagcaagtgt
atgaagccatgtggacagccctgtgctccgtgcattgagccctgcgcttggcagtgccct
caccaaagctgcagtaagctttgctatgagccatgcgatcgtccgccatgcacacaaccc
tgtgccaagaccctggattgcggccacccatgcattggtctgtgcggagacaaatgccca
agcaaatgtcgcatctgcaatcacgatgaggtcacagagattttttttggcactgaggat
gagcctgaggctttcttcattcagctagaggactgtggacacataattgaatacacagcc
atggaccaatacatggggatggatgacatccagctggcaaatggaggagagcaggtggcc
ataaaactgaaggaatgtccaaagtgtcgaacaccgatccgcaagaatctacgctatgga
tctcacatcaaccgcagcctgtcggaaatagagatggtaaaggtgaagataaacggacgt
caggaggatattgaagagcacaggaaggcccttcaaaatcagtgggaggacaaccttctc
ctccatgaaatgcatcgccaagaggactatatgcgtatcaatgatacactggaaagaaaa
aatctcacagaaaagcacctgtgggtcctagaaaacaagatggacttcctaataagagtt
gcaaagctgaagaaggcccaaatggaaaacatgtcatccatgcttagcagcagattagga
aagtattttaaggagtttgagcactggctcaacaaatggcaccaaaaattcacagaccag
caggtctttgatttgcagagagagctccggagaatcaccctcttgactgaactcaacgcc
cattgccatgtggcagagatgagaggacaaagtgacaaaatcatttccgaggtacaaaca
ataaccaaggttttggaaaagtttggccaatttacagaacaagaccaagacggagtagaa
gaagccatgaaggaactagacaaaaagcttcccctcacaggcttagggatcaatgaggag
gagagaaagatgatcgtctcgactatgggaaagcgacctggacactggtacaaatgtccc
aatggccatgtctatcttatagacgactgtggaggggctatggagagtcgacgctgccct
gattgtgaagctactattggtgggggcaatcacagattggcaagtggcaaccaagtcgcc
tcagagatggatggggcacagcaccctgcttggtctgaagccaacaacattctaaacttt
gatcaacatgacttctga
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