Etheostoma spectabile (orangethroat darter): 116687774
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Entry
116687774 CDS
T08457
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4-like isoform X1
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116687774
Cell adhesion molecules [BR:
esp04515
]
Immunoglobulin superfamily
DCC/UNC5 family
116687774
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
V-set
FN3_DSCAM-DSCAML_C
Fn3_VIN3
C2-set_2
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
116687774
NCBI-ProteinID:
XP_032369275
LinkDB
All DBs
Position
1:complement(24439271..24495729)
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AA seq
1239 aa
AA seq
DB search
MAVESTIWLFCLLSLFCGPSKQEKPVSVELSCGAGPSHVVLEPGLPLLLDCNLGASDTHF
NVTWLQDGRPLPLEGGDFLQYLANGSLLLLPTSQGVEGGYSCVSASTHGALTSRTINVLL
ASLSKFLQEPLPQTVPAGGAARFKCQIEGVPTPVITWEKDTVAVPEETRFISLLNGVLQI
LEVTKEDEGAYRCVASNSARKDISHEARLTVSTGSTESLNRVAIVAPPQNATVVLGRPAV
MECMAQGQPKPLVSWSRQDGKPISTDVVVLATNLVIRDTRRHHAGVYVCRANKPMTREFV
DAAAELHVPAPPVILQPPETASLSRGNTARFVCNSSGEPPPVLHWLKDGHPIKTFRRVKT
QSPGVLLINQLALEDAGYYQCIADNGLGTACATAKLTVIVREGLPSSPRHLSATPYSSTS
ALLIWEKPEYNSDQIIGYSVHCQRAAGSDNVEYQFAMNNDTTEYHVKELLPHTAYTFFVV
AYSPMGASPPSLPVTIEMLEDVPSAPPQLSIASTSPSDIRLMWHPLSSQNSRGTVTRYRI
EYSTLDQVDSVFSVEVGGNETQFTLRELQPNQAYRLRIAAGTGVGFGVPSEWAQHQTLAH
YNHSNHNMVIFAPTELKVRARVKSLNVTWHPSPNHTLVSGYKLSCREVEADESANERTTL
THTTRLGKKARYHLLTRLVPDRQYEVRVWGYNKQIDGAAAVWKGRTDKAHDKTSSLLLPR
PPPLPPSSIQAMANSSTSIWLRWEKPRFSNVRIINYTVRCSPAGTTNASLVSYYTSSAQE
ILLGALRPFTRYELAVQSNGVDVVGPFSGTVEESTLSDRPSTPPEELRLSALDSSSVLAS
WRPPLEPNGIIINYRILFSGNLSKPEHLWENLSQDGSITSVEVQGLSSDTHYFFKLGAST
EVGPGPYSPIKDVYTPLQKYELDIHAVTGIIVGVCLGLICILLCMCFSFRNGKSREVSGG
LDSTAVTPQYRRGGCPVPSNVPECSNSHELETLMPPGSQESGQPLEEASEEQSLMASANP
GEGEDAPAPEPKAAWNGSVSHNWANRITRYRDTITEDSPTLINGALNRLITDNGTGLEDY
LCTSVCSNQVEAEVIVHSELSDPGKEKKEESTTRGPSLSDDRYSLLSQPNPPGEGDALKK
LSLTQSPSSLPLIKLVANHNGELQGTADIEPQPDMGLTNGFHSPKTVHSVLRSEHLENGD
SRHCHSAPGKAISAGLSPAPFVTSGFVHSTSAAHGYLCP
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggagagtacaatttggctgttctgtcttctttcgctgttttgtggtccatcc
aagcaagaaaagcctgtttcggtggagctgagctgcggggctggacctagccatgtagta
ttggagccaggtttgcccctcttgctggactgcaaccttggggccagcgatacacatttt
aatgtcacctggcttcaggatggccggcctctgcctctggaggggggtgacttcctgcag
tatttggccaatggatccctcctcctgctgccaacctctcagggcgtggagggcggctac
agctgtgtgagtgccagtacccatggagccctgaccagccggactattaatgttctccta
gcaagtctgtctaagttccttcaggagccattgccccaaacggtacctgcggggggagct
gctcgcttcaaatgccagattgagggagtacctacacctgttattacctgggaaaaggac
acagtggctgttcctgaggaaacaaggttcatttcccttcttaacggggtactccagatt
ctggaggtgacaaaggaagatgagggtgcctaccgctgtgtcgcgtccaactctgccagg
aaggacatcagtcatgaagccagactcactgtctccacaggctcgactgaatccctaaac
agagttgcgattgttgcaccacctcagaatgcaacagtcgtgcttggccgtccagctgtg
atggagtgtatggcacaaggccagccgaagccactggtgtcttggagcagacaagatgga
aagcctatttccactgatgtggtcgtccttgcaacaaacctggtgattagagacacaagg
cgtcaccatgccggcgtttatgtctgccgggccaacaagcccatgaccagagaatttgtt
gatgctgctgctgagctgcatgtgcctgcccctccggtgattctccagcccccagagaca
gcgtccctctcccggggaaacacagccaggtttgtgtgcaatagctctggggaacctcct
ccagtgttgcactggctaaaggacggtcatcccatcaagacattcagacgagtaaagact
caaagccctggagtcctgctcatcaaccagctggcgttggaggatgcgggctactaccag
tgcatagcagacaacgggctaggcacggcatgtgctactgccaagctgacagtcattgtg
agggaaggtctgcccagctcccctcgccacctgtctgccacaccatactccagcacatct
gccctgctcatctgggagaaaccggagtataactcggaccaaatcataggctactctgtg
cactgccaacgtgccgcaggttcagataatgtggagtaccagtttgcaatgaacaacgac
accacagagtatcatgtcaaagagcttctcccccatactgcctacacattctttgtggtg
gcttactctcccatgggtgccagtccaccatccctgcctgttacgatagaaatgctggag
gatgtgccaagtgcacctcctcagctgtctatagccagcacgtccccctcagacatcagg
ctgatgtggcatccactgtcctcccaaaacagccgaggaactgttacccgctatcgcatt
gagtacagcactctggatcaggtggacagtgtgttctcagtggaagttggaggtaatgag
actcagttcacactaagagagctgcaacccaaccaagcctaccggctgaggatagcagct
ggaacaggcgttggctttggggttccatctgagtgggctcagcaccaaacattagcccac
tacaaccacagcaaccacaacatggtgatctttgcccccactgagctgaaagtcagagcc
agagtgaaatcactcaatgtgacatggcatccctcgcccaatcacacactggtctctggt
tacaagctgtcctgtcgagaggtggaggctgatgaatcagccaatgaaaggacaacactg
acccacaccactaggcttggtaagaaggccaggtatcatcttctcaccaggctggtccct
gaccggcagtacgaggtgagagtttggggatacaacaagcagatagatggagcagctgct
gtgtggaagggaaggacagacaaggcccatgacaaaacatcgtcgctgctccttccgcgc
ccccctccattgcccccaagcagcatccaagcaatggccaacagctccacctccatctgg
ctgcgctgggagaagccacggtttagcaacgtacgcatcatcaactacacagtgcgctgc
agcccagcaggaaccaccaacgcctccctggtttcttattacacaagctctgctcaggag
atacttctcggggccttgaggcccttcacccgctatgagctggcagtgcagtctaatgga
gtggacgtggttggacccttcagcggcaccgtggaggagtctaccctttctgacaggccc
tcaacacctcccgaggagctgcggctgagcgctctggactcctcctctgtgctggcgagc
tggcgccctccgctggagcctaacggtatcatcatcaactacaggatcttgttcagcggg
aacctcagcaagcctgagcacttgtgggaaaacctctctcaggatgggagcattaccagt
gtggaggtccagggtttgtccagtgacacccattacttttttaagctgggagcatccacc
gaggtggggcctgggccttattcacctataaaggatgtttacaccccccttcagaaatat
gagctggacatccacgcagtgacaggcatcatagttggtgtgtgtctggggctgatatgc
atcctcctctgcatgtgtttcagctttcgtaatggcaaatctagggaagtatctgggggc
ctggactccacagctgtgacccctcagtacaggcgaggaggctgccccgttccctccaac
gtgccagaatgcagcaatagccacgagctggaaacactgatgccccctggcagccaagag
tctggtcagccgctagaagaggcctcagaggagcagagcctgatggcaagtgctaatcca
ggggaaggggaagatgctcctgcacctgaacccaaggctgcttggaatggctctgtgagt
cataactgggccaacagaatcactagatacagagacaccataacagaagactctccaaca
ctcattaatggagctctcaacaggctaattactgataacggcacgggcttagaagattat
ctgtgtacatctgtgtgcagtaaccaggtggaggcagaagtcattgttcactcagagctg
tcagacccagggaaggagaaaaaggaggagagcaccaccaggggaccctcattatcagat
gacagatattcccttttgagtcagccaaacccaccaggagagggggacgctctcaaaaaa
ctatcactgacccaaagcccctcgagtcttcccttaataaagttggtggctaatcacaac
ggggagctacaaggcacggcagacatagagccacagccggacatggggctaactaatggc
ttccactccccaaagactgtgcattctgtgctgaggtcggagcatctggagaatggggat
tccagacactgccattcggctcctgggaaggccatctctgcagggctgtcccctgccccc
tttgtcacctccggctttgtccactctacctcagcagcacacggttatctgtgcccgtag
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