Etheostoma spectabile (orangethroat darter): 116687854
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Entry
116687854 CDS
T08457
Symbol
irx5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5 isoform X1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116687854 (irx5)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
116687854 (irx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
PGA2
Motif
Other DBs
NCBI-GeneID:
116687854
NCBI-ProteinID:
XP_032369424
LinkDB
All DBs
Position
1:complement(25904116..25908084)
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AA seq
458 aa
AA seq
DB search
MAYPQGYLYQPSASLALYSCPAYSTSVISGPRTEELGRSSSGSAFAPYAGSTAFTSASPG
YNSHLPYSAADAAAAATFTSYVVSKLKSSPYDHTTGMAGSIGYHPYAAPLGTYPYGDPAY
RKNATRDATATLKAWLGEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENK
MTWTPRNRSEDEEEDENIDLEKNDDDEPNKPTDKGDSTDTEADHKLLNPGDIGCDRFKEE
GHGKDTDPLLSDSELKDQEERTTELLPDSAKPTTSSPSAVPRGNQTLAEQDKPSDLSHAP
GTVTSNVTSVIHSPPSAPKPKLWSLAEIATSSDRCKSSGETPQACPGLGQSAVMSTNASP
SRSSPQCPLPNSTVLSRPLYYTSPFYPGYTNYGGSFGHLHSNHGSVTTGSTAHFNGLNQT
VLNRAEALVRESQRVRGQTQVDLCKDSPYELKKGMSNI
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcctcaaggctacttgtaccagccgtccgcttctctagccctgtattcatgt
cctgcgtacagcaccagtgtgatatcgggacccagaaccgaggaacttgggagatcctct
tcgggatctgcttttgcaccatatgccggatctaccgcgttcaccagcgcctcgccaggc
tacaactcccacttaccctacagtgctgcagacgcggcagcagctgccacattcacctcg
tacgtggtgagtaaactaaagagttcaccctatgaccacactacgggtatggccggctca
ataggataccacccttacgcagcacccttgggcacctacccttatggtgacccggcatac
cgtaaaaacgcaacccgggacgccactgccaccctgaaggcctggctcggtgagcaccgc
aaaaatccttatccaaccaagggagaaaagatcatgctggccatcatcaccaaaatgacc
ctcacccaggtgtccacctggttcgccaacgccaggaggagactaaagaaggagaacaag
atgacctggaccccccggaaccggagcgaggacgaggaggaggacgagaatattgatttg
gagaaaaacgacgacgacgagccaaacaagcccaccgacaagggagactccacagacaca
gaagcagatcataaactgctgaacccaggggatataggctgtgacagatttaaagaggag
ggccatggcaaagacacggatcctcttctgagcgactcggagttaaaagaccaggaggag
cggactactgagttgctgccggattccgcaaaaccaaccacgtcgtctccctcggcggtg
ccccgggggaaccagaccttagcggaacaagacaagccgtcagatttgagccatgcaccg
ggtacggtgaccagcaacgtgacctctgttatccactcgcccccttcggcccctaaaccc
aaactgtggtcccttgcggagatcgccacgtcctcagacaggtgtaaaagcagcggcgag
acgccacaggcctgccctggtttgggtcagagcgcagtaatgagcaccaacgcgtctcca
tcacggtcctcccctcagtgcccgctccccaacagcacggtgctatccaggcccctgtac
tacacctcccctttctaccccggctacacgaactatggtggcagttttggacatcttcac
agtaaccacggctcggtaaccacgggctccacggcacatttcaatggattaaaccagact
gtgttaaatagggcagaggctttggtaagagagagccagagagtcagaggccaaacgcag
gtagatctttgtaaagactccccttatgaactaaagaaaggtatgtcaaacatttaa
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