Etheostoma spectabile (orangethroat darter): 116687903
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Entry
116687903 CDS
T08457
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
esp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116687903
03015 mRNA surveillance pathway
116687903
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116687903
Enzymes [BR:
esp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116687903
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116687903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116687903
NCBI-ProteinID:
XP_032369514
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All DBs
Position
4:22232349..22239170
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AA seq
488 aa
AA seq
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MATDSWAQAVDEQEAAAESIGSLQIKDKPEENGTAANATDSSSAAAKSEVEGENKGTEED
DNEDKAAQSLLNKLIRNNLVSNTNQVEVLQKDPNSPLYSVKSFEELRLKPQLLQGVYGMG
FNRPSKIQETALPMMLAEPPQNLIAQSQSGTGKTAAFVLAMLSHVDPNNRFPQCLCVSPT
YELALQTGKVIEQMGKHYPEVKLVYAIRGNKLQRGMKLQEQIVIGTPGTMLDWCGKFKFI
DPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPKNCQMLLFSATFEETVWNFAQRIVPD
PNIIKLKREEETLDTIKQYYVLCNSREEKFHALCNIYGAITIAQAMIFCHTRKTAGWLAG
ELSREGHQVALLSGEMQVEQRAAVIDRFRDGKEKVLVTTNVCARGIDVEQVSVVINFDLP
VDKDGNPDNETYLHRIGRTGRFGKRGLAINMVDSKMSMNILNRIQEHFSKKIEKLDTDDL
DEIEKIAS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggctacggactcctgggcacaggcagtggacgagcaagaagccgcggcggaatcgatc
ggtagcctccaaataaaagacaaaccggaggaaaatggcacggctgcaaatgcaacagac
tccagtagtgcagctgcaaagtcagaagttgagggagaaaacaagggtacagaagaagat
gacaacgaggacaaagcggcgcagtcattgttgaacaagctgatacggaataatcttgtc
agtaacacaaatcaagtggaagttcttcagaaggatcccaactctccgctctactctgtc
aagtcttttgaggagttgcgactcaaaccacagctgcttcagggtgtctacggcatgggt
ttcaaccgaccatccaaaatccaggagactgccttacctatgatgctggctgaacctcca
cagaatctgattgcccagtcgcagtcgggaacagggaaaacagctgcctttgtcctggcc
atgctcagtcatgtagatcccaacaacagatttccccagtgcctgtgtgtgtcacccacc
tatgaactggcacttcagactggcaaggtaattgagcagatgggcaaacactatcctgag
gtcaaactagtctacgccatcagaggaaacaaattgcagcgaggcatgaagctgcaggaa
cagatagttattggcacacctggtaccatgctggactggtgtggaaaattcaagttcata
gaccccaagaagatcaaggtgtttgtgctcgacgaggctgacgtcatgattgccacacag
ggtcaccaggaccagagcatccgtatccagaggatgttgcctaaaaactgccagatgttg
ctgttctcagccacgtttgaagagacagtgtggaactttgcccagcgtattgtgcccgac
cccaacatcataaagttgaagagagaggaggagacactggataccatcaaacagtactac
gtgttgtgcaacagcagagaggagaaattccacgccctctgtaacatctacggagctatc
accatcgcccaggccatgatcttctgccatacaaggaagactgcaggctggctggcgggg
gagctgtccagagaaggccaccaggtggcgctgcttagtggagagatgcaggtggagcag
agggctgctgtcatcgaccgcttcagagatggcaaggagaaggtcctggtcacaacaaat
gtttgtgctcgaggtattgatgtcgagcaggtttctgtggtgatcaactttgacttgcca
gtagacaaggatggtaacccagacaatgagacatatctgcacaggattggccgcacaggt
cgatttggtaaaaggggactggccatcaacatggtggacagcaagatgagcatgaacatc
ctcaacaggatccaggagcatttcagtaagaaaattgaaaaactagacacagatgatctg
gatgaaattgagaaaattgccagctaa
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