Etheostoma spectabile (orangethroat darter): 116687912
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Entry
116687912 CDS
T08457
Symbol
ccdc36
Name
(RefSeq) interactor of HORMAD1 protein 1 isoform X1
KO
K26085
interactor of HORMAD1 protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116687912 (ccdc36)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Meiosis-specific proteins
DSB formation-related proteins
116687912 (ccdc36)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IHO1
SKA1
FlgK_D1
DUF1664
Katanin_con80
DUF7605
EzrA
Fez1
TPR_MLP1_2
DUF16
YabA
Motif
Other DBs
NCBI-GeneID:
116687912
NCBI-ProteinID:
XP_032369524
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Position
4:17081394..17085775
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AA seq
439 aa
AA seq
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MLLNRSSKAMNHTRNIKEMLSIPTGSSNRNVSTSGYSSITDSQLFFGSQFWPENSQGMSQ
DMSLSARTSQQSSQEGSDPKFSSSYHTKPFLFGELKDKSKAFGILDKFEEDRKKAKEKTD
GDLLAKECLNFRETLNNIQQLVAGTEKNTAVCQTVLANVDNFASTLHNNLNSLQRDIFKQ
FETFLNKVNSQKDMITELEERVQKSGDTTAELGSNMQSLKNSLACLREEQERERNMLEET
LKLLNTLVSKHSAKPTPERVTDTAIQTSPGLVQPFCNILQENKLESTQLTCNSYNLEHNA
AKVPPQGPSCVAGKRKFTQRSNRRRKKRPLVLSQRNKHIVTNENSRPLMNCDKQQNVLTP
LCERRDLHTVTSQNREARSIAEGCFITPLSCWSQDSNSSVCLAGIEPIIEKLSAESKTET
PMKPEGFWQLFDMDYNVGF
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgttgctaaacaggtcgtcaaaggcaatgaatcatacaaggaacataaaagaaatgctg
agcatcccaactggaagcagcaacagaaatgtgtccactagcggctactccagtatcaca
gactctcagttattctttgggtctcagttttggcctgaaaattctcaaggcatgtctcaa
gatatgagtttgtcagccaggacatcccaacaaagttcacaagagggaagtgacccaaag
ttttcaagcagttatcacactaaacccttcctgtttggagaattaaaggacaagagcaaa
gcctttggaatactggataaattcgaagaggacaggaaaaaagcaaaagaaaaaactgac
ggtgatcttttagccaaagaatgtttaaattttcgagaaactctcaacaatatccaacaa
ctggttgctggcacagagaaaaatactgctgtgtgccaaacagtccttgcgaatgttgac
aattttgcatcaacattgcacaataatcttaacagtcttcagcgtgacattttcaagcag
tttgagacttttttgaataaagtgaactcccagaaggacatgataactgaactggaggag
agggtgcaaaagagtggggacaccacagcagaacttggttcaaatatgcaaagcttaaag
aatagtctggcgtgtctgagagaggagcaggagagagaacgaaacatgcttgaagagact
ctgaagctgctcaacaccttagtctcgaagcactcagccaaacccacccctgagagagtg
acagacactgccatccagacatcaccagggctggtacagcctttctgcaacatcctgcag
gagaacaagcttgaaagcacacagcttacatgtaactcatacaaccttgagcacaatgca
gctaaagttccccctcaaggtcccagctgtgtcgcaggaaagaggaaattcactcagaga
agcaatagaaggcgcaaaaagaggccactggtgctctcacaaaggaataagcacattgtc
acaaatgaaaacagtcgacccctcatgaactgtgacaaacaacaaaatgtattaacccct
ctctgtgagcgccgtgatctgcacacggtaaccagccaaaacagggaggcaagatccata
gctgaaggatgtttcatcaccccgctcagctgctggtctcaggacagcaacagctcggtg
tgccttgcaggaatcgaacccatcatagagaagctctcagctgagtccaaaacagagacc
ccaatgaaacccgaagggttctggcagttgtttgacatggattacaatgtaggcttttaa
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