Etheostoma spectabile (orangethroat darter): 116687938
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Entry
116687938 CDS
T08457
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116687938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116687938
03036 Chromosome and associated proteins [BR:
esp03036
]
116687938
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116687938
Coactivators
SAGA/TFTC/STAGA complex
116687938
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116687938
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TAFH
TMP_3
Motif
Other DBs
NCBI-GeneID:
116687938
NCBI-ProteinID:
XP_032369564
LinkDB
All DBs
Position
4:26447363..26453318
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AA seq
658 aa
AA seq
DB search
MDASTATTDSTTGHDPGKTLVVSGAVTPLPHHQGKVASFSVQTLNGSQTINSHNSGSAAP
LVGATVTSVTANSTSTAISVTAVNSGPVMSKGLTSALMHPSSNSVIQTSLMNSQSVVASA
QSVSQATGPTVTLVRPPMQTAGSGTSLNGNFNVSHAVVSNTTGHTGIDIHTPLVNNSQPS
NSLSVSSSHIIKAEPPTTIQSPPPPPPPQPAVTPGAVSAPRVLSTVAAGPGGIRALTPQM
LAPRLPQTSSGQPSVHNIQLPPGMVLVRSESGQLLMIPQQALAQMQAQAQGGMAPRTATP
TSVPLGQTPGNTIISRHVAPSTIIRQGCPAPTSSAATTTLHRPPILQSSVGAAVPGITPR
TVSQTAGTTVSSVTVSKETMENVKKCKNFLSTLIKLASTGKQSTETAACVRELVKDLLEG
RLEAEEFTSRLYKELNSSPQPYLVPFLKRSLPALRQLTPDSAAFIQQSQLPQPASGPVPS
TSPIPTTVVLGSPAPRLTAPVSRPQLPPAISKPGQTGALVIQLQQQRAMLRPQVALPTTP
MVTLRNQAPGRIMLGQQQLQLKELQPLPVRPEVPHVSKQVSAASLTQAQKNKLKEAGGTF
KDDDDINDVAPGGLEGPLAEGKRNTLETNSKSGAGEKFPCKEGFPPLLALYRENAGDG
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atggatgcatcgacggccaccacggactccactacgggacacgaccctggcaaaacactt
gttgttagtggcgctgtaactcctctccctcatcaccaggggaaagtagcctcattctca
gtgcagactttaaatgggagccaaactataaactctcacaattcaggaagcgctgcccct
ctcgtgggggcgacggtgacaagtgtcactgctaacagcaccagtactgcaatatctgtc
acagctgtcaacagtggaccagtgatgtcaaaagggctgaccagtgcactaatgcacccc
tcgtcaaacagtgtaattcagacttctctcatgaactcgcaaagtgttgtcgcttcagct
cagtctgtgagccaggcaacaggacccactgtgacacttgtcaggccgcctatgcaaacc
gcggggtcgggtacaagtttgaatgggaactttaatgtgagccatgctgtggtttccaat
acaacaggtcacacaggtattgacatacacaccccgcttgttaataacagccagccgtcc
aactcgttgtctgtcagctcatcacacattatcaaggcagagccacccacaacaatacag
tcaccaccaccaccaccaccaccgcagccagcggtcactcctggcgccgtcagcgctccc
cgggttctctcaacggtagctgccggtccaggcgggatacgagctctgacgcctcagatg
ttagccccaagactcccccagacgtcctcgggacagcccagtgtacacaacatccagctc
cccccgggaatggtgcttgtacgcagtgagagcggacagctgctgatgattcctcagcag
gctctggcccagatgcaagcccaggcccagggaggcatggcaccacgcactgctacacca
acaagtgtgcctcttggccagactcctggaaacaccatcattagcagacatgtggctccc
agcaccattatccgtcaaggctgtccagccccaacgtcctctgctgcgaccaccactctt
catagacctcctatccttcagagctcagttggggctgcagtaccaggaattacccccagg
actgtcagccaaacagctggcaccacagtatcctcagtaaccgtgagcaaagagacaatg
gagaatgtgaagaaatgtaagaacttcctgtctacactgataaagctagcctccactggg
aagcaatctacagagactgcagcctgtgtgagagagttggtcaaggacctgctggagggt
agactggaagctgaagaattcaccagcagattgtacaaagagctcaattcttcaccccaa
ccttaccttgtgcctttcctcaagagaagcctcccagccttgagacagctcaccccagac
tctgcagccttcatccagcagagtcaactcccccagccagcctcaggtccagtcccctcc
acctcacccatccccaccacggtggtccttggcagcccagcaccccgcctcactgcccca
gtcagtaggccccagctcccaccagccattagcaaaccaggacagactggcgcactggtt
atccagcttcagcagcagagggcaatgttgagacctcaggtagccttaccgacaaccccc
atggtgactctcagaaatcaggctcctggccgcatcatgctggggcagcaacagctccag
cttaaagagctgcagccacttcctgtgaggccggaggtgccacatgtttcaaaacaagtg
tctgctgcatccttgacccaggctcaaaagaacaagctgaaagaggctggtggcactttc
aaagatgatgatgacatcaacgacgtggcccccggggggctggaggggcccttagcagag
ggaaagcgaaataccctagaaaccaattcaaaaagtggggcgggggaaaaatttccctgt
aaggagggtttccctccccttttggccctttacagggagaatgcaggagatgggtga
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