Etheostoma spectabile (orangethroat darter): 116688007
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Entry
116688007 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: transcriptional repressor CTCF-like
KO
K23195
transcriptional repressor CTCF
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116688007
03036 Chromosome and associated proteins [BR:
esp03036
]
116688007
Transcription factors [BR:
esp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
116688007
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
116688007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
Zf-C2H2_ZNF451_C
zf-C2H2_7th_ZNF462
zf-C2H2_REST
zf-met
Zf-C2H2_ZNF451
zf-C2H2_jaz
zf-C2H2_6
LIM
zf-C2H2_15
Motif
Other DBs
NCBI-GeneID:
116688007
NCBI-ProteinID:
XP_032369671
LinkDB
All DBs
Position
1:5520587..5527337
Genome browser
AA seq
758 aa
AA seq
DB search
MEGEIVSMETTQTAALAPEGKVLPEGEALIQGAVITTQGEVADNMEMMVMDALDPTLLQM
KXEVLEGGGTMTVSGGDEGQIITLQVVNMEEQTGAALGLGQLQLVHVPVTTTTVEGLQAT
YVDASTANKDTDPVICHTLPLPEGFQVVKVGANGEVETVEQEELQAAHEELQVVRGDVED
EEEAAEVEATVPEEEQPEWSKDPEYQPITSIRSRGKKGKKSRLRYGEGDRDMDVSVYDFE
EEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHT
DERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRHRRYKHTHEK
PFKCSMCDYCSVEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYEC
YICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSFIEKGKKC
RYCDAVFHERYALIQHQKTHKNEKRFRCEQCDYCCRQERHMVMHKRTHTGEKPFACSQCE
KTFRQKQLLDMHYKRYHDPNFVPTAFVCGKCNKTFTRRNTMLRHSENCTGEVIEEEEENG
TPAPKKARRGRKRKMQARKDDSDDTADELDEVEEEEGLSEIEVEQAPPVVPIPAPVGPPV
KRKRGRPPKSKLDTAAIIRVEDEVTGEVDDIIVKKEVGADDLDGNDEAAQEVVVGGGNPT
IQLEEMPQEQGTAPEVQQSEAPANGDLTPEMILSMMDR
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgagatcgtttccatggagaccactcagactgctgccctggctcctgaagga
aaggtcctgccagagggtgaggctctaatacaaggggcagtcataactacacagggggag
gtggctgacaatatggagatgatggtgatggacgctctggatccgactctgctgcaaatg
aagnacgaggtgttggagggcggcggcacaatgactgtttctggtggagatgagggtcag
atcatcacgctacaggtggtgaatatggaggagcagacaggggctgcattaggtcttgga
cagcttcagctggtgcatgtacctgtcacaacaacaactgtagaagggctccaggccacc
tatgttgatgcatcaactgctaacaaggacacagatccggttatctgtcacactcttcct
ttgcctgagggatttcaggtggtaaaagtgggtgccaatggtgaggtagagaccgtagag
caggaggagcttcaagcagcccacgaggagcttcaagtggtgaggggagatgtggaggat
gaggaagaggcagcagaagtcgaagccactgttcctgaggaagaacagccagaatggtcc
aaggacccagagtaccagcccatcactagtatccgtagtagggggaagaaaggaaagaag
agccgtctgcgctacggagagggtgatcgtgacatggatgtttctgtgtatgactttgaa
gaagagcagcaggaggggttgctgtcagaagtgaatgctgagaaggttgtgggcaacatg
aagccaccaaagcccaccaaaatcaagaaaaaaggtgtaaagaagactttccagtgtgag
ttgtgtagctacacctgtccaagacgctccaacctggacagacacatgaagagccacaca
gatgagagaccacataagtgtcacttgtgtggacgagcctttcgaactgtcacactgctg
agaaaccacctcaatacacacacaggcactaggccgcataaatgcacagattgtgacatg
gcatttgtgaccagcggtgagttggtgcgtcatcgtcgctacaaacacacacatgagaag
cccttcaagtgctccatgtgtgactattgcagcgtggaggtcagtaagttgaaaaggcac
atccgctctcatacaggggagcgacctttccagtgcagtctgtgcagctatgctagcaga
gacacttacaagctgaagagacacatgaggacgcattcaggtgaaaagccatacgagtgc
tacatctgccatgcacgtttcacacagagcggcaccatgaagatgcatattctgcagaaa
cacacagagaacgtagccaagttccactgcccacactgtgatactgtcattgcacgcaag
agtgaccttggtgttcacttgcggaagcagcactcttttattgagaagggaaagaaatgt
cgttactgtgatgctgtgtttcatgaacgatacgctctcatccaacaccagaagacccat
aagaatgagaaacgcttccgctgtgaacagtgtgactactgctgcagacaagaacgtcac
atggtaatgcacaaacgtacacatacgggggagaagccgtttgcctgcagccagtgtgag
aaaacatttaggcagaagcagcttctggacatgcactacaagcgctaccatgatcccaac
tttgtccccactgcttttgtatgtggcaagtgtaacaagacgttcacccgcaggaacaca
atgctgcgtcactctgagaactgcacgggtgaggttatagaagaagaagaagaaaatgga
actcctgcacccaaaaaggctcgtcggggcaggaagaggaagatgcaggccaggaaggac
gatagtgatgacacagcagatgaactggatgaggtagaggaagaagaggggctaagtgag
attgaggtggaacaggccccaccagttgtccctattccagcccctgtggggccaccagtc
aagaggaaacgtggacggcccccaaagagcaaactagacacggctgctatcatccgtgtg
gaggacgaggttactggagaggtggatgacataattgtgaagaaagaagttggagccgat
gacttggatggcaacgatgaagctgcacaggaggtggtggtcggtggaggaaatccaacc
atccagctggaggagatgccccaggaacaagggacggcaccggaagtgcagcagtctgaa
gccccagcgaacggagacctcactcctgagatgatcctcagcatgatggaccggtga
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integrated database retrieval system
