Etheostoma spectabile (orangethroat darter): 116688068
Help
Entry
116688068 CDS
T08457
Name
(RefSeq) sortilin-like isoform X1
KO
K12388
sortilin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116688068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
116688068
NCBI-ProteinID:
XP_032369752
LinkDB
All DBs
Position
4:complement(21662331..21678851)
Genome browser
AA seq
809 aa
AA seq
DB search
MISVSCILALGLFSSAMGTDYEGEDFSDLKRLQREFGRDDERHSLVKSELSKRSAGLNEQ
TCTALLGEESALQNYTHSFTFKVRTMGSLSLAWVGDGSGVLLVLTTFQVPLFMMRFGQSN
LYRSEDYGKTFKDVTHLINHTFIQSEFGIAISPDHSGKVMLSADVSEIGGFKLFRSQDFG
VTFVPTDLPFEPLIQMLYNPGDCNVLLTLSITLDLWLSEDFGATWRKIHDSVCLVRWGPK
DNIYFTTNHNGSCNDKGMLELRKTADYGRSFQTIASRVYSFVLGGRFVFASIMTGTGTER
VIHVSVDGGEVWNMAQLPPVNHEQFYSILAANQDMIFMHVDSPGDSGAGTIYVSDDRGAV
FSKSLERHLYTTTGSDTDFTAITSLRGVYMTSVLAHDGAVETVITFDQGAKWQTLHKPQN
SHCDAETSTNRPNRCRLHIHASYSTTMKMNVPMLPLSQPNAVGLILAHGSVGDTESALSP
DVYMSDDGGYSWLLALRGPHHYAILDSGGLLVAVEHTNSPVNQIKFSTDEGQCWHTYNFT
SEPLHFSGMDSEPGSRSMNVSLWGYRNDFSKWVVITIDFKNLLTRDCTEGDYVQWLAHSA
NPSGSVDGCVLGYKETFLRLRKDTVCLNGRDFAVTKKLSPCPCTVADYHCDFGYYRPENS
SECVEQKEMKGHPLEFCLNGTTEQLQTSGYRKIPGDQCEGGFQPDRKETDLRRLCTSNAL
YPNSLTENSSSNTAVIVMVVIAMLLTSAVAGIWLVKKYVCGGRFLVHRYSVMREHVEAVK
IEGVDDLDTHYMETGKAQYNEDSDQDLLE
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgatctccgtatcttgcattttggcgctcgggttgttttcgtctgcgatgggcacagac
tacgagggagaagacttctccgatttgaagaggctgcagagggagtttggcagagacgat
gagcgacatagtttagtaaagtcggagctctcgaaacgcagcgcaggactgaatgaacag
acatgtacagctctgcttggagaagagtcagccctgcaaaattacacccattctttcacc
ttcaaagtgaggaccatgggttcactgtcactggcctgggtgggagatggatccggggtg
ctgctggtgttgacaacatttcaggtgccgttgtttatgatgcgttttggacagtctaac
ctctacaggagtgaagactatggcaaaacgtttaaagatgtgacccacctgatcaaccac
accttcatccagagtgagtttggcatcgccatcagtcccgaccactctggcaaggtgatg
ctctctgctgatgtgtcagaaatcggggggtttaaattgtttcgctcgcaggactttggc
gtgacctttgttccaaccgacctgccatttgagcccctcattcagatgctgtacaaccct
ggagactgcaatgtgctgctgacgctcagtatcacgttggacctgtggctgtctgaggac
tttggtgccacctggaggaagatccatgacagtgtttgtttggtcagatggggtccaaaa
gacaatatctactttacaacaaaccacaatggatcatgcaatgataaaggaatgttggag
ttaaggaagacagcagactatggtcgaagtttccagaccatcgcatcaagagtttactcc
tttgtactgggagggcgctttgtttttgcctccatcatgactggcacgggtacagagcgt
gtgatccatgtgtcagtggacggaggtgaggtgtggaacatggctcagcttcctccagtc
aaccacgagcagttctactccatattggcagccaatcaggacatgatattcatgcacgtg
gacagccctggagactccggtgctggaaccatctatgtgtcagatgacagaggagccgtg
ttctccaagtctctggagcgccatctttacacgaccacaggaagcgacactgactttact
gccattacttcactcaggggtgtctacatgaccagcgtacttgcacacgatggtgcagtg
gagacggtgatcacctttgaccaaggagcaaaatggcagacgctacacaaaccacagaac
agccactgtgacgctgagacctctaccaacaggcctaacagatgcagacttcacattcac
gcctcctacagcaccaccatgaagatgaacgtccccatgctgcctctttcacagcccaat
gctgtgggcctcattctggctcatggcagcgttggagacacagagtcagctctgtcccct
gatgtgtacatgtctgatgacgggggatactcgtggctgttggctctcaggggcccccat
cattatgccatactggactctggagggctgctggtggctgtggagcacacaaactcacct
gtcaaccagattaagttttcaacagatgaggggcagtgctggcatacgtataactttacc
agcgaaccccttcacttcagcggaatggacagtgagcctggctctcgctccatgaacgtc
agcctgtggggctacaggaacgacttcagtaaatgggttgtgatcaccatagacttcaag
aacctcctcaccagagactgtactgaaggggactatgtacaatggctggctcactctgca
aaccccagtggatctgttgatggttgtgtgctgggctataaagagaccttcttacgcctg
aggaaagacactgtctgtttgaacgggagagactttgctgtcaccaagaagctgtccccc
tgtccatgtacagttgccgattatcactgtgactttggatattaccggccagagaacagc
tcagagtgtgtggagcagaaggagatgaagggtcatcctctggagttctgtttaaatggg
accactgaacagctacagaccagcggctaccggaaaattccaggagaccagtgtgaggga
ggttttcagccagacaggaaggagacagacctgaggcgactgtgcaccagcaacgccctt
tatccaaattctctgactgaaaatagttcatcgaacactgctgtcatagtgatggttgtc
atagcgatgcttctgacgagtgctgttgcaggcatttggctggttaagaaatatgtctgc
ggaggacggttccttgtgcaccgatactctgttatgagggaacatgttgaggctgttaaa
atagaaggagtcgatgatcttgacactcactacatggagacaggaaaagcacagtacaac
gaagattcagatcaggacctcttagaataa
DBGET
integrated database retrieval system
