Etheostoma spectabile (orangethroat darter): 116688119
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Entry
116688119 CDS
T08457
Symbol
gli1
Name
(RefSeq) zinc finger protein GLI1
KO
K16797
zinc finger protein GLI1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
116688119 (gli1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116688119 (gli1)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
116688119 (gli1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
116688119
NCBI-ProteinID:
XP_032369824
LinkDB
All DBs
Position
4:complement(7811635..7873452)
Genome browser
AA seq
1485 aa
AA seq
DB search
MPVDMQPHQGLYHYETSPSQPSRGLVPSEQSPYSDVSSLRAPILNGPSQDCRAMYNHMTT
SMTHGSGPGQGIGHCMDQYMRPPQAPLPHSMMGHRGMPPTEGGNSTPYCNQNNMMSSHHN
FCQIQPGSDQIGSVDGSRFSTPRSMLKLSKKRALSISPLSDASVDLQTVIRTSPNSLVAF
VNSRCNPNGASSYGHLSVSSMSPSLGYSSNIHCQSRQQGSMYGGGGGTPLGGHTPGPCQG
SRLPPHNPRLHAPPKHGHLKTEPGLGGMMDGMNVKSLEERSEGDVASPSSTGTQDPLLGL
LDGRDDLDKEDGKPEPEAIYETNCHWESCSKEFDTQDQLVHHINNEHIHGEKKEFVCHWQ
ECSREQRPFKAQYMLVVHMRRHTGEKPHKCTFEGCNKAYSRLENLKTHLRSHTGEKPYVC
EHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHI
TKKHRGDTGPRLPGSAMTPGGQSSELLLEKEETRREDCKLLAPETALKSQPSPGGQSSCS
SERSPLGSANNNDSGVEMNLNAAGSLEDLTALEDGVAGGGGEPGSVGTMGMSAQALKRLE
NLKIDKLKQIRRPTPPGRCANNKLPALSGPGENMGMCAPSPLLSNRRVMELSSHELGGGT
SIGCSSNDRRGSGTSSLSSAYTVSRRSSMVSPYLSSRRSSEVSQMGGTGGGGCHLLGPEQ
SVGDPLSPETNRRGAPCLGGGLPGLPNLTPAQQYSLKAKYAAATGGPPPTPLPNMEQPGT
PRRRGGVLSEYQGQPLPPFLQPGGPRRHSANTEYGTGVIYPHQAPGNNSRRASDPVRSVA
DPQALPKRFNSLNNVAMMGRRNALQHRGSDTSLSRHLYSPRPPSITENVMMEAMGMEPHL
VPIDARDRSMMMPPGERSFMGYQQQHQTLGGVGGSLGNQLSPSHDSLSCPDQGYIQGHYQ
NQGGEVTSRAGGNPMGQARPSHSEGMSNTLLQQAEYSMSTCQLSPSGPHYPSIGQGGDAV
GPWSDSHSQIQTSNHALQNQRGMQYSETSLQHQQTQAHFNNQTTLYNSHDGTHKLTIKPE
QQFHPGMGGGNACQSAKLQQQRMLLQQTQGYPQQTGQVLMRNSNNTSGGFQGQNQNTFPS
GGGLSLGCAGTALSDGQRSETPMIQVKEMMVRNYVQSQQALMWEQQQEQQQQQLQQSGIK
PPPASDNMDMSAQTAMMQPSPQHQNHNLYSSQPYPSYPNQNLVMSPPAHSQVPSSVTPKD
QQLTGLQGSCYAQEMVVPRPPQGRKPLSRQNSLSQVGGYLASPPQLSPVHSTSSPRRAVR
LPPVQHPQHQQNEMFSPSNNNNMYYSGQINMDMDKHMDAQNGPCLNQQHSMGSNLDPSGG
TKPVPMTPYPESGPISNALENLDLDNARIDFTSIIDDAESSSYSPITNPLQGQPGSSSQA
SSRLTTPQTSISLAAGSGLSNMAVGDMTSMLTSLAGENKYLNTLS
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgccagtggacatgcagccacaccaggggctgtatcactatgagacctcacccagccag
ccctccaggggcctagtcccatcagaacagtctccctacagcgatgtgtcctcgctgcgt
gccccaatcctcaatggcccctcccaggactgccgcgctatgtataatcacatgactacc
agcatgactcatggatcaggcccaggacaggggattggccactgcatggatcaatatatg
aggcctcctcaggccccactgccacacagtatgatgggccacagggggatgccgcccaca
gagggtggcaatagcaccccctactgtaaccagaacaacatgatgtcctcacatcacaat
ttctgccagattcagcctggctctgatcagattggctcagtcgatggctcgaggttctcc
acgcctcgttccatgctgaagctgagtaaaaagagagctctgtccatctctcctctgtct
gatgccagtgtagacctgcagacagtgatccgcacatcacccaactccctggttgccttt
gtcaactctcgctgcaaccctaacggggccagttcctatggccatctctctgtgagctcc
atgagcccgtccctcggctattccagcaatatacactgccaatccaggcaacaaggttca
atgtatggaggaggcggaggaacgcctttgggtggacacacaccaggtccctgccaaggt
tcccgcttacccccccacaatcctcggcttcacgctccacccaagcatggacacctaaaa
acagagccagggctgggaggtatgatggatggcatgaatgtgaagagcctggaggagagg
tcagagggagatgtggccagtccttcttccactggcactcaggaccccctcctgggtcta
ctggatggcagggatgacttggacaaggaggatgggaagcctgaaccagaggccatctat
gaaaccaactgccactgggagagctgcagcaaggaatttgacacacaagaccagctagtt
catcatatcaacaatgagcacatccatggagaaaagaaggagtttgtgtgtcactggcag
gagtgctctcgagaacagaggcctttcaaagcccagtacatgctggttgttcatatgcgc
agacacacaggagagaagccacataagtgcacttttgaaggttgtaataaggcctactct
cgcctggagaatttgaagacccacctgcgctctcacaccggagaaaaaccatacgtgtgt
gaacatgaaggttgcaacaaggccttctccaatgcttcagaccgggccaagcatcagaac
cgaactcactccaatgagaaaccatatgtatgtaagattcctggctgcactaagcggtat
acagatccaagctctttgcgtaaacatgttaagactgtgcacggccctgaagcccacata
accaagaagcatcgtggagacacaggacctcgactccctggttcagctatgacccctgga
ggccagagctctgaactactgctggagaaagaggagacacgcagggaggactgcaaactg
ttggctcctgagactgctctgaaatcccagccaagccctggtggtcaatcatcatgcagt
agcgaacgttctccgctggggagcgccaataacaatgacagtggggtggagatgaaccta
aatgcagctggcagtctggaggatctcacagccctggaggatggagttgcaggtggagga
ggggagccaggaagtgtaggaacaatgggaatgtcagcacaggctttaaagaggctggag
aacctgaagattgacaagcttaagcaaatccgcaggccaacccctcctggccgctgtgct
aataacaagctacctgcactttctggtccaggggagaatatgggaatgtgtgcaccttct
ccgctcctctctaatcgacgagtcatggagctgtccagtcacgagttaggaggtggcaca
tccattggctgctcttctaatgacaggagaggaagtggcaccagcagcctaagctctgca
tataccgtcagccgtcggtcctccatggtgtctccttacctgtccagtcggcgctcaagt
gaggtctcacaaatgggaggaacgggagggggagggtgtcaccttcttggcccagagcag
agtgttggagaccccctctctcctgagaccaatcgcagaggagctccatgtcttggagga
ggattgccaggtcttccaaatttaacacccgcccagcaatacagcctaaaggctaaatat
gctgcagcaactggtggaccaccacctactcctttacccaatatggagcagccaggtact
ccacgcagaagaggaggtgttttgagtgagtaccaggggcagcctctgcctcccttcttg
caaccaggtgggccacgtaggcatagtgccaacacagagtatggcactggtgttatctac
cctcaccaggctccaggtaacaacagcaggcgagccagtgacccggttcgatcagtagca
gatccacaagctctccccaagcgcttcaatagccttaataatgtagctatgatgggccga
aggaatgcgctgcaacaccgtggctctgacaccagtctttcccgccacctgtactcccct
cgtccacctagcattacagagaatgtaatgatggaggctatgggtatggagccgcacctt
gtcccgattgatgccagggatcgttccatgatgatgccccctggagagagaagcttcatg
ggataccagcaacaacatcaaactcttggaggagttggaggttctcttggaaaccaactg
tccccaagccatgactctctgagctgcccagaccagggttacatacagggacactaccag
aaccagggaggggaagtcacttccagggctggtggaaatccaatgggccaagcaaggcct
agtcactcagagggcatgtctaatacacttctccagcaggccgagtacagtatgagcacc
tgccagctcagtccctcgggaccccattaccctagcataggccaaggtggtgatgctgta
ggcccatggagtgattcccatagccaaatccaaacttccaaccatgctctccagaaccag
cgaggaatgcagtattcagagactagcctgcagcatcaacagacacaagcccacttcaac
aatcagacaaccctctacaacagtcatgacggaacccacaaactcaccatcaagcctgag
cagcagtttcaccctgggatgggaggtggaaatgcctgtcaaagtgcaaagctccaacag
caacggatgctcctccagcagactcagggttacccacaacagacaggccaggtcctaatg
aggaactctaacaataccagtggtggctttcaagggcagaaccagaacaccttccccagt
ggagggggcttgagcttgggctgtgctggcactgcgctctcagatgggcagaggtcagaa
acccccatgatacaggtgaaggagatgatggtgaggaactatgtacagtcacagcaagct
ctcatgtgggagcagcaacaagaacagcaacaacagcagctgcagcagagtggaataaaa
ccacctccggcatctgataatatggatatgagtgcccagacagcaatgatgcagcccagt
ccacagcaccaaaaccataatctttattccagccagccctatccatcctaccccaaccag
aacctggtcatgagtcctccagcccacagccaagtgcccagctctgtgacacctaaagac
cagcagctgacaggtctccaaggctcatgttatgcccaggagatggtggtgcccaggccc
cctcagggacggaaacctctcagtcgccagaacagcctatcacaggtaggaggctacctc
gctagcccaccccaactcagccctgtccactccacttccagccccaggcgagcagtccga
cttcctccagttcagcatccacagcaccagcaaaacgaaatgttctctccttccaataac
aacaacatgtactattcgggccagataaacatggatatggacaaacacatggacgcccag
aatggaccttgtctcaaccagcagcacagtatggggtccaacctggacccatcaggtggt
acaaagcctgtccctatgactccctatcctgaatctggccccatctccaatgccttagaa
aacctggacctggataatgctcgcatagacttcacctccatcattgatgatgctgagtct
tcctcatatagcccaatcaccaatcccctacaaggtcagcctgggtcttcctcccaggcc
tcatctcgcctcaccacccctcagacttccatcagcctagctgcaggttctggcctgtcc
aacatggctgtaggagacatgacgtccatgcttacctctctggctggggagaataaatac
ctgaacacactgtcttag
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integrated database retrieval system
