Etheostoma spectabile (orangethroat darter): 116688229
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Entry
116688229 CDS
T08457
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like isoform X1
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04010
MAPK signaling pathway
esp04260
Cardiac muscle contraction
esp04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116688229
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
116688229
04261 Adrenergic signaling in cardiomyocytes
116688229
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116688229
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116688229
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
VWA
VWA_3
dCache_1
VWA_2
MCP-like_PDC_1
VWA_CoxE
WAK_assoc
dCache_2
Motif
Other DBs
NCBI-GeneID:
116688229
NCBI-ProteinID:
XP_032369977
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Position
4:17602146..17635219
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AA seq
1164 aa
AA seq
DB search
MPGNWRILFFHVCSSRFLLLWILVGLNVEEVAGSQQGIPLSVVKLWASAFGGEIKSISAK
YSGSQLLQKELWAITAPRPGTNSSSEASASVKGNSRINPKNAACLGTWEERGGTRGSPRK
HGESVQTAYRKRLLGPNLGPPCSEKYKDFEKSVTVEEIDGVKLVKNLALKMEEVFRKKAE
ATRRLVEAAEEAHHQHEDNPDLQYEYFNAVLINEVDEEGNNVELGGEFLLEPNDHFNNLS
VNLSLSVVQVPTNMYNKDPDIVNGVYWSEALNKVFVDNFERDPTLIWQYFGSAKGFFRQY
PGVKWHPDEHGVIGFDCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILD
TLGEDDFFNIIAYNQEIHYVEPCLNGTLIRADRTNKDHFREHLDKLFAKGIGLLGDALAE
AFTILSDFNQTGHGSLCSQAIMLVTDGATEMYDDVFEKYNWPERKVRIFPYLIGRESAFA
DNLKWMACANKGYFSQISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYVDSALSQA
HKLKNKAGPSLMTTVAMPVFSTKNETKNQGILLGVVGTDIPLQELMKLIPKHMLGIHGYA
FAITNNGYVLTHPDLRPLYQGSQKRRKPNYSSVDLSEVEWEDKDDFLRNAMVNRRTGTFS
MEVKKTVDRGRRVLKMHNDYYFTDIKGTPFSVGVALSRGQGKYFFRGNVSVGAGLRDLEQ
PDVALANEWTYCNTEEQHEHRHLTQIQAIKLFMTGRRPHLRCDRELIQEVLFDAVVTAPL
EAYWTGLALNKSENSDKGVEIAFLGTRTGLSRTNLFVPADQLSNQDFLTAEDKEGVFNAD
HFPLWYKRAAEQVPGTFLYSIPFSTALENKSVVLASTAIQLLDDRKSPIVAAVGIQMKLE
FFQRKFWTACRQCTALDGKCSISCDNADINCYLIDNNGFILVTEEQSQTGLFFGEVEGAV
MNKLLQMGSFKRIMLYDYQALCKDYAGSSDSARTLSDPFTVVKWLLTELIIFLLEFNLYS
WWNVDLSVKAQRSRGKTMMVPCDTEYPAFVSERTIKETTGNIDCEGCIRSFVIQQIPSSN
LFMVVVDNKCDCSSSPPVTMDPIEIMYNESLKCDRLKFQKDRKKPESCHPFHPEENAMEC
GSATRLSSRLTAALLPLIAATISR
NT seq
3495 nt
NT seq
+upstream
nt +downstream
nt
atgccggggaactggaggatcctgtttttccacgtgtgcagcagcagattccttttgctc
tggatcctcgtcggcttgaatgtggaggaggtggcggggtcccagcaagggatccctctg
tcagtcgtgaagctctgggcttcggcatttggtggagaaattaaatccatttctgcaaaa
tattctggatcccaactactgcaaaaggagctgtgggctatcacagcgccgcgtcctggg
accaactccagttctgaggccagtgcctcagtcaagggcaatagcaggattaatcctaaa
aacgctgcatgtcttggaacgtgggaggaaagaggaggaaccagaggaagtccacgcaaa
catggggagagcgttcaaactgcatatagaaagcggctcctgggtccaaacctaggacct
ccttgctctgagaaatataaagactttgaaaagtcagtcacagtggaggaaattgatggt
gtaaaactggtcaaaaacctggctttgaagatggaggaagttttccgaaaaaaagcggag
gctaccaggcggctggtggaggcagcagaagaagcgcaccatcagcatgaggataatccc
gacctgcagtatgagtacttcaacgccgtactgatcaatgaagtggacgaggaaggcaat
aacgtagagctgggaggagagttcctcctggagcccaacgaccatttcaataacctatca
gtcaacctgagcctcagtgtggtgcaggtgcccaccaacatgtacaacaaagatcctgac
atagtgaacggagtgtactggtccgaggctctgaataaagtatttgtagataattttgaa
agagacccaacactaatctggcaatactttgggagcgccaagggtttcttcagacagtac
cctggagtaaagtggcatccagatgaacatggtgtcattggctttgactgtagaaacagg
aagtggtacattcaggcagcaacatctccgaaagatgttgttatcttagtcgatgttagt
ggaagtatgaaaggacttaggctaaccatcgccaggcagactgtgtcctccatattagat
acacttggagaggacgacttcttcaacatcattgcatataatcaggagatccactatgtg
gagccttgtttgaatggcacgctgatccgagccgacagaaccaataaagaccatttccgc
gaacatctggacaagctgtttgccaaagggattgggctgctgggtgacgcattggccgaa
gcgttcacaatcctgagtgattttaatcagactggacatggcagcctgtgcagccaggcc
ataatgcttgtgactgacggggcgactgaaatgtatgacgacgtttttgagaagtacaat
tggccagaaagaaaggtgcgaatattcccatacctgattggacgagaatctgcatttgct
gataacctcaaatggatggcttgtgccaacaaaggatatttcagtcagatctccacctta
gcagacgttcaggagaacgtgatgaggtatcttcacgtcatgagccgcccgaaggttatt
gaccacgagcacgacacagtgtggactgaagcttacgtggacagtgctctttcccaggct
cataagttgaaaaacaaagcaggcccaagtctgatgactacagtagccatgcctgtcttc
agcacaaagaatgaaacgaagaaccagggtattctgttgggggtcgtaggaacagacatc
cctctgcaggagctgatgaagctcatccctaaacatatgttaggaatccatgggtacgca
tttgctatcacaaacaatggctacgtcctgacacatccagacctcaggcctttgtatcag
ggcagccagaagaggaggaagcccaactacagcagcgtggatctctctgaggtggaatgg
gaagacaaagatgattttctacgcaatgctatggtgaacaggaggacagggactttctct
atggaggtgaagaaaacggtggatagagggcggcgtgtcctgaaaatgcacaatgactat
tacttcactgacatcaaaggaacaccattcagtgtcggagtggctctctccagaggtcag
ggaaagtacttcttccgaggaaatgtatcagttggagccgggctccgtgatctggaacag
ccagatgtcgccctggcaaatgaatggacttactgcaacacagaagagcagcacgagcac
cgtcacctgacccagattcaagccatcaagctcttcatgacaggccgcagaccacacctg
agatgtgacagagagctgatccaggaggtgttatttgatgctgtggtcactgctccactg
gaggcctactggactggattggccctcaataagtcagagaactcagacaaaggagtggag
attgccttcctgggtacacgcaccggcttgtcaaggaccaacctgtttgtacctgctgat
cagctctccaatcaagatttcctgacagctgaggacaaggagggagtgtttaatgctgat
cacttcccactgtggtacaagagagctgcagagcaggtccccggcacatttctctactcc
atacccttcagcacagctttagaaaataagagtgtggttttggccagcacagcaattcag
ctcctcgatgatagaaagtctccaattgttgcagctgtggggatccagatgaagcttgaa
ttctttcagaggaagttctggactgcctgcagacagtgtacagctctagatggaaaatgt
agcataagctgtgataacgcggacattaactgttatctcattgacaacaatggcttcatt
cttgtcactgaggagcaatctcagacagggctcttctttggggaggtggagggtgcggtt
atgaacaaacttctgcaaatggggtcatttaaaaggatcatgctgtatgattaccaggcc
ctttgcaaagactacgctgggagcagcgacagtgcacgaactctctcagatcccttcact
gttgttaagtggctcctgactgaacttatcatttttctgctcgaatttaacctgtacagc
tggtggaatgtggatctttcagttaaagctcaaagatctcggggtaaaaccatgatggtg
ccgtgtgatacagaataccctgcctttgtctctgaacgcaccatcaaagaaacaacaggc
aacattgactgtgagggctgtatcagatcttttgtcatacagcagattcccagcagcaac
ctcttcatggttgttgtggacaataagtgtgactgcagcagttctcctccagtaaccatg
gatcccatcgagatcatgtacaacgagtcacttaaatgtgaccgactgaagtttcagaag
gacagaaaaaagcctgaatcatgccatcctttccaccctgaggaaaatgccatggagtgt
ggttcagcaacacgactctccagtcgtctaacagcagctctgctccctctgatagcagcg
accatcagcaggtga
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