Etheostoma spectabile (orangethroat darter): 116688289
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Entry
116688289 CDS
T08457
Symbol
snrpe
Name
(RefSeq) small nuclear ribonucleoprotein E
KO
K11097
small nuclear ribonucleoprotein E
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116688289 (snrpe)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116688289 (snrpe)
03041 Spliceosome [BR:
esp03041
]
116688289 (snrpe)
03032 DNA replication proteins [BR:
esp03032
]
116688289 (snrpe)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
116688289 (snrpe)
Spliceosome [BR:
esp03041
]
Complex A
U1 snRNP components
Sm proteins
116688289 (snrpe)
U2 snRNP components
116688289 (snrpe)
Complex B
U1 snRNP components
116688289 (snrpe)
U4/U6.U5 tri-snRNP components
116688289 (snrpe)
Complex C
U2 snRNP components
116688289 (snrpe)
DNA replication proteins [BR:
esp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
116688289 (snrpe)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
116688289
NCBI-ProteinID:
XP_032370106
LinkDB
All DBs
Position
4:complement(13121656..13125494)
Genome browser
AA seq
92 aa
AA seq
DB search
MAYRGQGQKVQKVMVQPINLIFRYLQNRSRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDD
AEEVHMKTKNRKPLGRIMLKGDNITLLQSVTS
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacaggggacaaggacagaaggtgcagaaggttatggtgcagcccattaaccta
attttcaggtatctacaaaatcgctcacggatccaggtgtggttgtacgagcaggtgaac
atgcggatagagggctgcattattggttttgatgagtacatgaacctagttcttgatgat
gcggaggaggtccacatgaagactaagaacagaaagccactggggaggatcatgttgaaa
ggggacaacattaccttgctgcagagtgtgaccagctag
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