Etheostoma spectabile (orangethroat darter): 116688314
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Entry
116688314 CDS
T08457
Name
(RefSeq) contactin-4-like
KO
K06762
contactin 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116688314
Cell adhesion molecules [BR:
esp04515
]
Immunoglobulin superfamily
Contactins
116688314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_C17orf99
V-set_CD47
Ig_5
Pur_ac_phosph_N
C2-set_2
Tissue_fac
C2-set
fn3_2
Interfer-bind
fn3_4
NDNF
Motif
Other DBs
NCBI-GeneID:
116688314
NCBI-ProteinID:
XP_032370172
LinkDB
All DBs
Position
4:28975004..29142585
Genome browser
AA seq
1029 aa
AA seq
DB search
MMLLWKLLVLQSLMGCLAVSSVLQSPVFTKQPGSIVYPVETVEKNREVVFSCEAQGSPPP
MYRWKLNGTEISPKSGSHYSLSGGNLRISHLNKDQDAGTYQCLASNSFGTIVSREASLTF
AYLENFKTHRRSSVSVREGQGVVLLCGPPSHSGDLVFSWIFNEYPTFVKQDTRRFISQET
GNLYIAKVEPSDVGNYTCVVTNTVTKTRVQGPPTPLVLRSDGVMGEYEPKIEVQFPEVVH
VAKGSTVKLECFALGNPVPSINWRKVDGVPFPRKVDMRKASGVLEIPYFQQEDAGTYECV
AENSRGMNTVKGKLSFYAPPHLIEKPQDVQKLIDDSLVWECKATGKPKPSYRWMKNGENL
EPAEERIQVANGALSISRLTLSDTGMYQCVAGNKHGEVYSNAELRVIAVAPDFSHNQLRS
QTLVKVGGDVLIECKPKMSPWGVISWRKGSEPLQESNRVSILDNGNLRVWNATKSDAGLY
TCVARNQFGVASSTGSITVKEPTAITTLPSTLDITVGESVVLPCQVSHDPSLELKFTWFF
NEQLLHFGSHGGFFEKVGGQHSAGDIMIRNIQLRHAGKYTCAVQTKVDSISIAVDLVVRG
PPGPPTSIHVDEITDTTASLSWRPGPDNHSPITAYTIQARTPFSLGWQAVTTVPEVVGGH
RMTATVIDLSPWVEYEFRVLASNTIGTGEPSKPSKQARTKGTSPKVTPANVSGGGGSRSE
LVITWEPVPEELQNGPGFGYVLAFRPHGATGWMQAAVPSAEASRYVFKNESIQPFSPFHV
KVGVYNNEGEGTFGPVTTIYSAEEEPGRAPTRVRAKSLSASEIEVSWKALPWNASKKRVL
GYEVRYWRRSEREDTASVQKTVGNQTSTIIRGVKGSTTYYISVRAYNTAGTGPPSNTVNV
TTKKPPPSQPPVKVMWNTSNSKIILNWEQVKALENESEVTGYKVLYKKNRHSHPNVMETN
TTSVELALPTDEDYIIQIKPFGEGGEGSSSRQITIPRIPGPNAVASASKVSTLSALSTIA
LSFTARTSL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatgttgctatggaaactgctggtgctgcagtcacttatggggtgccttgcagtgagc
agtgtcctgcaaagtcccgtcttcaccaagcagcctggcagcatcgtctatcctgtggag
accgtggagaagaacagggaggtggtgttcagctgtgaagcccagggaagcccaccaccc
atgtaccggtggaaactgaacggcacagaaatcagccccaaatctggatctcactacagc
ctttctggaggcaacctcagaatcagccatctgaacaaagaccaagatgctggaacgtat
cagtgcctcgcctccaactctttcgggaccatcgtcagccgagaggccagtctaaccttt
gcatacttggaaaacttcaagactcacagaagaagctctgtgtcagtccgcgaaggccaa
ggagttgttctgctgtgcggccctccatcgcattctggagatctcgtattttcctggatc
tttaatgagtacccaacatttgtgaagcaggatactcgccgattcatctcacaggagacc
gggaatctgtacatagccaaagtggagccctcagatgttggcaactacacctgtgtggtg
accaacaccgtcacaaagacccgagtccagggtccacccactccactagtgctccgcagt
gatggtgtgatgggtgaatatgagccaaagattgaagttcagtttccagaggttgttcat
gttgccaaaggatccactgtaaagctggaatgctttgctctgggaaacccggtaccatct
ataaactggaggaaagtggacggtgtgcccttccccaggaaagtggatatgaggaaagcc
agtggcgtcttggaaatcccatatttccagcaggaggacgcgggcacgtacgagtgtgtg
gcggagaactccaggggaatgaacacagtgaaagggaagctctctttctacgcccctcct
catctcattgagaaaccccaagatgtccagaagctcattgatgactcgttggtgtgggag
tgtaaagccacagggaagccaaagccctcttacaggtggatgaaaaatggagagaacctg
gagcctgcagaggagcgcatacaggttgccaacggagcgttgtcaatcagtcgtctgacc
ctgtccgacacaggaatgtaccagtgcgtggctgggaataagcacggcgaggtgtactcc
aatgcagagcttcgagttatagctgttgccccagatttctctcacaaccaactgaggagc
cagacactggtgaaggttggaggagatgtgctcattgagtgcaaacccaagatgtcgcct
tggggcgtgatctcttggcgcaagggcagcgaacccctccaagaaagtaacagggtctcc
atcttggacaacggtaaccttcgggtatggaatgcaaccaaatctgatgcaggactttac
acctgtgtggcaagaaaccagtttggcgtggcgagcagcacaggaagcatcacagttaaa
gagccgactgccatcaccaccctgccatccacgctggacatcaccgtgggggagagtgtg
gtcctgccctgtcaagtgagccacgacccatccctggagctcaagttcacctggttcttc
aacgagcagctcctccactttgggagccatggtggattttttgaaaaagtgggaggtcag
cattcggcaggagacattatgattcgaaatatccagctgaggcatgctgggaagtacacg
tgcgccgtgcaaacgaaggtggacagcatttccattgctgtcgacttggttgtcagaggt
cccccggggccccctaccagcatccatgtagacgaaatcactgataccacagcctctctg
tcctggaggcctggtcctgataatcacagtccaattacggcatataccatccaggccagg
acgccattttccctcgggtggcaggctgtcaccacagttcctgaggtggtggggggccac
cggatgacagctacagtaatagacctgagcccttgggtggagtatgagtttcgagtcctg
gccagcaacaccatcgggaccggcgagcccagcaagccatctaaacaagcaaggacgaag
ggcacctctccgaaggtcacaccagctaatgtcagtggaggcggtggcagccgctccgaa
ttagtcatcacatgggagccggttccagaggagctacagaatggaccgggtttcggctac
gttttggcttttcgaccccacggtgccacaggatggatgcaggctgccgtaccgtccgct
gaagcatccagatatgtctttaaaaacgaaagtatccagcccttctcgcctttccatgtg
aaggtcggtgtttacaacaatgagggggaggggacgtttggacctgttaccaccatctac
tctgctgaggaagagcctggccgagctcccaccagggtccgtgccaagagcctctccgca
tctgagattgaagtttcatggaaagctttgccctggaatgccagcaaaaaaagagtcctg
ggctatgaggtgaggtactggaggagaagcgaaagggaagacacagccagtgtgcaaaag
actgtaggaaatcaaacatctactattatccgtggggtgaaaggcagcactacgtattac
atctcagtgagggcgtacaacactgcgggaacgggtcctcccagcaacacggtcaacgtt
accaccaagaaaccaccacccagtcagccgccggttaaagtgatgtggaacacatcaaac
tccaagattatattgaactgggagcaggtcaaagctcttgagaatgagtcagaggtcact
ggttacaaagtgctgtataagaagaatcgacacagccaccccaacgtcatggaaaccaac
acaacctctgtagagctcgccctgcccactgatgaggattatatcatccagataaagcca
tttggagagggaggggaaggcagcagtagcaggcagatcaccatcccaaggataccaggc
cccaacgcagtcgcctcagcatccaaggtctccactctgtcagccctcagtacaatagca
ctgtctttcacagcgcggacatctttatga
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