KEGG   Etheostoma spectabile (orangethroat darter): 116688427
Entry
116688427         CDS       T08457                                 
Symbol
col7a1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VII) chain
  KO
K16628  collagen type VII alpha
Organism
esp  Etheostoma spectabile (orangethroat darter)
Pathway
esp04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:esp00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    116688427 (col7a1)
SSDB
Motif
Pfam: Collagen VWA fn3 Kunitz_BPTI VWA_2 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C VWA_3
Other DBs
NCBI-GeneID: 116688427
NCBI-ProteinID: XP_032370363
LinkDB
Position
4:complement(19372009..19442741)
AA seq 3083 aa
MRSLFFTVTVLLSSMNRADAQGRCDNVQAADIVFLVDGSSSIGRANFLQVKGFMAGIVKP
FANSVSNSGIRFGAIQYSDTSRVEFTFTTYVVGTELVNAVENLNYKGGNTRTGAGLKFVA
DNFFNPASSRNVPKITILITDGKSQDSVQEPAQKLRSQGVHVFAVGVKSADRNELAQISS
QPSSDFTSFVGDFKLLNTLLPLVSPQVCSRAGGVYASDEAFSGPSNIQFTGQTSDTLRFR
WSAAGGPLTGYVVQYVPLSGLGQPITAELRQETVPVTQRTFTAQELRSGTDYLVTIIAQY
PNSVGESVSAKQRTRSLPGVTSLRLVQAGFFSLSVGWAQPSSPVQGYRLTYGPRGQAHTH
IPLFLYPFTQSVEQSLSADSTSVTLESLQPDTEYVVSLFPLFPRNSASPSILNARTLRLE
SVQQLTVETESEGSVRVGWRGVSGARAYRLVWGPFTGRNVETVEVAGDREFHTLSRLQFD
TEYIVTIIPLYEGNTEGPVATARFKIDRQEQQLLRAATTSPSTIRLTWRLIQSSQGYRLE
WREGEGGRVQSRTFPRTTTSYELTGLQPNTEYIITLYTLFEGREEATPVSTTSIEEQPVG
RVSNLRVVESLGSTARLGWTGVAGATQYRIIILNTEAGSEEIRIIPGNQTILDLRDLAVG
VSYGVSVTALVGENEGDPVTVYIKPEQGAGRVTNLRVTNKNSRRLRIAWTGATGATGYRV
TWRQGNSAEQFRIVGAEVTAFTIDGLQPDEVLVIGVASVVDQRVGEAVTLSTRTNPNGGS
VSGLRIVEVTSQKIRIAWSQSTRATGYKVIWRRDDGVETTRILPADVSSFTIDGLQSDSA
YSVLVSSLTGSREGSPSTLSIRTESDQSVVGTVTSLQVQEARGEVVRVTWVGVQGATAYR
VSWRRMDGGQERSQLVGGDVTTVDLDQLDPGAQYEVQVMALVQNREGTPVSVRVTTPGAP
TPSVPTTTLRVAEVTRNSMRLGWTPVPGATGYILRWREMGGTDFGRGSSVTLPAASSFYD
VTGLQLGRRYGFTVQPTFESGLGTESSVEENTVCVGGRLDVVFLVPASTDRISLARPLRQ
LLTSAVGSLNTIGARDSQVGVVVYGYRPKRWFLLNRHGRSDTLLQEIQSTPFDESPGNNI
GEAVTYTRQYLLTPSAGRRARVPGAVVIIADKKSADNLTLAASSLRATGVTVLAVGIDQA
NTEELRRAVTDGSTQNILYTRDASQLDTVYTDLADLLCGIARIPEGPGPDQCTVYCSESE
KGDRGEKGERGRDGVDGQKGDPGRDGVPGREGPRGPEGRPGPPGQTVTIEPSLEVKGEKG
ERGFPGIDGNPGLPGRPGSPGNAGVPGSQGLPGIRGDPGEPGVTGLQGSKGSKGERGEPG
STISGGGLPGRKGEAGIPGIPGTPGRPGSDGVKGAVGDPGIPGQDGRPGLPGTPGTSTKG
DKGSPGERGLPGVGSGVAVKGEKGSPGTPGAQGPRGLPGLQGSKGDKGDGGDGAPGPPGR
QGEPGDRGPRGPPGEIGGKGDRGQPGEPGAQGDRGERGPAGETGERGDPGKPGSAGTPGL
RGLPGPSGPSGEKGNEGARGEPGRSALGLPGKKGDQGERGLAGLEGGRGDKGEMGQKGEK
GSSGSGGSAVGPKGEPGERGLAGVNGRPGAKGDPGEPGERGENGRPGTPGKPGPPGKEGE
RGEKGDEGTPGESGLPGKSGERGLRGLAGQPGRAGEKGDIGDPGESGRNGSPGPAGLRGE
KGDLGPQGPPGPPGKVADVQGLLRGERGEKGDAGDPGEHGSKGLKGEAGTPGAPGLRGPE
GQRGPAGTRGDTGERGVPGEKGERGTSGLDGRPGLDGKPGAAGPPGQRGDPGKQGDPGRD
GLAGLRGEQGPPGPVGPPGTAGTPGKAGEDGKPGAPGKMGEDGVPGEDGRKGDKGEPGAA
GRDGRDGQKGEGGLAGPVGPSGPAGPPGVPGSIGPPGQVVYFKGVEAAPIPGPPGPPGTP
GVPGIPGAVGARGERGPSGLKGDAGDPGEDGAPGKPGTPVVRQALANFGILMSDLKVVVD
RKDIPLTPTVPKAGKGEKGDVGEPGPRGPSGADGARGFQGERGAKGDQGERGPVGATGPP
GRAIVERGPEGPPGQPGESGKPGIPGVPGRAGWTETWRREWESGHMREKFYGRRVDIGXG
EGNXQGMXGASADSVLIGPPGVRGPPGIGGQKGEPGAAGSPGPQGERGFAGSRGDKGDRG
QSGEKGRDGSQGTPGEPGKPGQDGKPGLPGFPGVLGRPGNPGETGMRGPTGPMGPNGLPG
PPGVKGNQGEPGVGVQGPPGAQGSTGLPGPTGTPGAVGPQGPPGLSGQVGEAGKPGVPGR
DGVPGKDGLPGLSGKQGIAGPPGQAGLKGEQGDSGPPGKAVAGPPGPKGERGLNGATLPG
TAGERGLPGEKGDRGDKGAVGYKGERGVDGEPGEPGDDGAQGSPGPKGDKGEKGIGLAGP
PGRVGPQGLKGDPGLPGPAGPPGLQGKSGDAGQPGLRGESGQQGPPGPPGERGLQGFAGR
AGNVGPPGPSGPPGQAGSPGTNGVKGDKGEVGIGVSGPRGERGDAGPRGEEGRPGLDGER
GATGTPGIRGIRGEKGDVGLQGDKGEKGDTVLVGGPAGEKGNKGETGDRGPKGVQGEKGG
KGQEGPVGEQGLRGEPGERGSTGFPGARGPGGQKGEAGQPGVPGESGLPGKDGLLGQRGE
KGELGIVGLRGIKGDRGPKGACGGDGPKGEKGDAGINGRSGLPGRKGEQGEIGPSGAPGT
PGKEGLVGPKGDRGFDGLAGPKGAQGEKGERGTPGVPGPPGPRGVDGVQGLTGPQGPAGA
KGPEGLQGQKGERGPIGPAMIGPRGIPGIPGERGEAGELGPDGAKGDRGEPGMTEYEVRE
YVRSEMSQHCACGGSGPINRSQPPVRARPSPDQQLVLKGEEGRELRVVVNTNDPDYEHIY
SIEAYDDPLDELLYFTPSANQSDGEVVKVETDKTVKVEPNKASTADVTKKAKVTLLKAVK
PRSVRSKRRVKGEAPADSCLLPMEEGSCGRYTMRWYFNNQVQACRPFIYSGCEGNDNRFL
HLEECEELCLGETEGPRPLKTVL
NT seq 9252 nt   +upstreamnt  +downstreamnt
atgcggagcttgtttttcactgtgactgtcctgctgtcctccatgaaccgggctgatgct
cagggcagatgtgataatgtgcaagcggcagatatcgttttcctggttgatggctcttcc
agtattggccgagctaactttctgcaggtgaagggctttatggctggaatcgtcaagcca
tttgccaactctgtcagcaattcagggatacggtttggggccatacagtacagtgacacc
tccagagttgaatttacatttactacctacgtggttggcactgagctggtcaacgctgta
gagaatctgaactataaggggggaaacacacgcactggtgctggtctcaagtttgtcgct
gacaacttcttcaaccctgcgtccagtcgtaatgtcccaaagattactatcctgataaca
gacggaaagtcacaagacagcgtgcaggaaccagcacagaagctgcgtagtcaaggagta
catgtttttgcggttggtgtaaagagtgcagacaggaatgaattggcacagatctcctcc
cagcccagcagtgatttcacctcctttgttggggacttcaaactgctaaacacacttctt
cctcttgtgagcccccaagtgtgttccagagcaggaggagtctatgctagtgatgaggca
ttttctggtccgtccaacattcagtttacaggccagacgtctgataccctcaggtttcgc
tggagtgcagcaggggggcctttgactggctatgtagtccagtatgtgccactttctggc
ctgggtcagccaatcacagcagaactgcgtcaggagactgtccctgtcactcagaggacc
tttactgcacaagagctgaggtcaggaaccgactacctggtgactattattgcccaatac
cccaacagtgtgggggagtctgtttctgccaagcaacgaaccaggtctttgcctggggtc
accagtctacgcctggtccaggcaggcttcttctctctctctgtgggctgggctcagcct
tcgtctcctgtacagggctacagactcacctatggaccacgaggtcaggcacacacacac
atacctctgtttctatatcctttcactcagtctgtggagcagtctctgtctgcagactcc
acctctgtcacattggagtcacttcagcctgacacagagtacgtcgtcagcctctttccc
ctgttccctcgaaactcggcatccccgtccattctcaatgcccgcacattgcgccttgag
tcagtgcagcagttaacagtggagacggagtcggagggcagtgtccgtgtggggtggaga
ggcgtcagtggtgcacgggcctaccgtctggtctggggaccatttacaggtcgaaatgtc
gagacggtggaggttgctggtgacagagagttccacactttgtccagactgcagttcgac
actgagtacattgtcaccatcatcccgctttatgagggcaacacggagggccctgtagca
acggccaggttcaagatagaccgtcaggagcagcagttgctcagagcagctaccaccagc
ccctccactattcgcctcacctggagactcattcagtcatctcaagggtaccgcctagag
tggagagagggggaaggaggccgcgtccagagccggacctttcctagaaccactaccagc
tatgagctaaccggccttcagcccaacacagaatatatcatcaccctgtacactctgttc
gaaggtcgggaggaggccacacctgtctccaccacatccatagaggaacagccagtgggg
agagtgtccaacttgagagttgtggagtctctgggcagtactgcgagacttggctggacg
ggtgtagccggggccacacagtaccgcatcatcatcctgaacacagaagccggatcagag
gaaatacggattatccctggaaaccagacaatccttgacctcagagacctggcagtggga
gtgtcttacggtgtcagtgtcacagcgctggtgggagaaaatgaaggagacccagttact
gtctacatcaaacctgagcaaggtgctggaagagtgactaacctcagagtcacaaacaaa
aacagtcggagacttcgaatcgcctggacaggtgctactggggcaacaggttacagagtt
acttggagacaaggcaacagtgcagagcagttccgtattgttggggcggaggtcacagcc
ttcactatagacggcctgcaaccagatgaggtgctggttattggtgttgcatctgtggtt
gatcaacgtgtgggagaggcggtcacgctgtctactcggactaaccccaatggtggatca
gtgtctggccttcgcatcgttgaagtcacatctcagaagatacgcattgcatggtcacag
tctactagggcaactggctataaggtcatttggcgccgtgatgatggagttgaaacaact
cgtatcttgcccgccgacgtctcttccttcaccattgatggactacagtcggattcagcc
tacagcgtcttagtttcttcccttactggctctcgagagggaagtccatccaccctgagc
atcagaacagagtcagatcagtctgtggttgggactgtgacgtcactgcaagtccaggag
gcacgtggagaggttgtccgtgtcacttgggttggtgtgcagggagcaacggcttatcgt
gtgtcttggagaagaatggacggtggtcaagagagaagtcagctggtggggggagatgtg
acaacagtggatttagaccagttggaccccggagcccagtacgaggtgcaggtcatggct
ttagttcaaaacagagagggaacccctgtgtctgtcagagtcaccacacctggtgccccc
accccctcagtacctacgacaactttacgagtggcggaagttacccggaattctatgcgg
cttggctggactccagtaccaggtgccacaggatatatactacgctggcgagagatgggt
ggaacagattttggacgaggctcatctgtcacgctccctgctgcgtccagcttttacgat
gtgactgggctgcaattgggccgtcggtatggctttactgtgcagcccaccttcgaaagt
ggattgggaactgaaagctctgtagaggaaaacactgtctgtgtgggtgggcgtctagat
gtggtgtttcttgtgccggcatctaccgatcggattagcctcgcaagaccactgcgccaa
ctcctcacaagtgcagtagggtcgctcaatactatcggagcccgcgactctcaggtggga
gttgttgtatacggttaccgacccaaaagatggttcctgcttaatcgccatggcagatct
gacacccttcttcaagagatccagtccacaccttttgatgaaagtcccgggaataacatt
ggtgaggcggtgacatacacccggcagtaccttctgaccccttcagctggacggagagcg
agggtccctggggctgttgtcatcatcgctgacaaaaaatctgctgacaacctgactctc
gcagcaagcagtctcagggctacaggtgtgacagtgttagcggtgggtatagaccaggca
aataccgaggagctgcgccgggcggtgacagacggcagcacccaaaacatcctgtacact
cgtgatgcatcacagttggacaccgtatatactgatctggcagacttgctctgtggcatt
gccagaataccagagggtccaggtccagatcagtgcactgtttattgctctgagagtgag
aaaggagatcgtggagagaagggtgagagaggcagagatggtgtagatggacaaaaggga
gatcctggtcgtgatggtgtgcctgggagggaaggccccagaggacctgaaggccgccca
ggtccaccaggccaaactgtcactattgagccctcattggaagtgaaaggagaaaagggg
gagagaggttttcctggcattgatggaaatccagggttgccgggacgaccaggttcccct
ggaaatgcaggagtcccgggttcacagggcctacctggtatcagaggagatccaggtgaa
ccaggtgtgacagggctacaagggtcaaaaggcagtaagggtgaaaggggtgaaccaggc
tcaacaatatcaggagggggtcttccagggaggaaaggagaggcaggcatcccgggaata
ccgggtactcctggccggccaggcagtgatggggtaaaaggtgctgttggagatccgggg
atacctggtcaagatggtcgcccaggtttaccaggaacaccaggaacctccaccaaggga
gacaagggcagcccaggagagaggggacttccaggagtcggcagcggggtggccgtgaag
ggcgagaagggctccccaggtactccaggggctcagggtcctagagggctaccaggacta
cagggcagcaaaggagacaagggcgatggtggtgatggggcgccgggacccccaggcagg
caaggagagcctggggacaggggaccccgtgggcctccaggagaaattggtggaaagggt
gaccgaggacagccaggtgagcctggagcacagggagacaggggggagcgaggaccagct
ggtgaaactggggagagaggggacccagggaagccgggcagtgcaggaacaccagggttg
agaggtttaccagggcccagtggaccatcaggagaaaagggaaacgaaggtgcacgcggg
gagcctggcagaagtgctcttggtttgcctgggaagaaaggggatcagggggaacgaggc
ctggctggtctggaggggggcaggggagacaaaggagagatgggacagaaaggagagaaa
gggtcttcagggtcgggagggtcagctgttggacctaaaggagagccaggagagagagga
cttgctggtgtcaatggaaggccgggtgccaagggagatcctggtgaaccaggagagagg
ggggagaatgggcggccaggaaccccaggaaagcctggtcctcctgggaaagagggggag
agaggagagaagggtgatgaaggcacacctggggagtctggactcccagggaagtccgga
gaaagaggactgaggggactggctggtcaaccaggacgagcaggagagaaaggagacata
ggagacccaggagagtcgggacgaaatggcagccctggacccgcgggactgagaggggag
aaaggagacttgggacctcaggggcctccaggaccaccaggaaaagtggcagacgtccag
ggactcctgagaggagagagaggagagaagggtgatgctggcgacccaggagaacatggt
agtaaaggtctgaaaggcgaagcggggactccgggagccccaggcctacgaggtcctgag
ggacaacggggacctgcaggcacaagaggtgatacgggggaaagaggagttcctggagag
aagggagaaaggggaacgtctgggttagatggacgtcctggtctggatggtaaaccaggt
gctgctggaccaccgggtcaaaggggggatcctgggaaacagggggatcctggaagagat
ggtttagcaggacttagaggggaacagggccccccagggcctgtcgggcctccaggcact
gcaggaacacctggtaaagcaggtgaagacggcaaacctggtgctcctggaaaaatgggt
gaggatggtgtgcccggtgaagatgggagaaagggtgataaaggagaaccaggagcagct
ggaagagatggccgggacgggcagaaaggagaagggggccttgctgggcctgtcggaccc
tctggccctgcggggcctcctggagtacctggcagcattggtcctcctggacaggtggtg
tattttaaaggagttgaagcggcgccaatcccaggcccgcctgggcctccaggaacccct
ggcgtaccagggatccctggagctgtgggagccagaggggaaagaggtccatctggcctc
aaaggtgatgctggagacccgggagaggacggggcaccaggcaaacctgggacaccagtg
gtaagacaggctctggccaactttggcattctgatgtctgatctgaaggtggttgtggac
aggaaggacataccactgactcctacagtgccaaaggcagggaaaggtgaaaaaggagac
gtgggcgaacctggaccgagaggaccatctggtgcagatggtgcccgtggttttcaagga
gaaagaggagcaaaaggggatcaaggagagcgaggacccgtgggagcaactggtcctcca
ggtagagccattgtagagcgagggccagagggacccccagggcaacctggagagtcaggc
aaaccaggaataccaggagttcctgggcgagctggatggacggagacctggaggagggag
tgggagagtggacacatgagagaaaagttttatggacggagagttgatataggttaagga
gagggaaattgacaaggaatgtaaggagcatctgctgactcagtactgattggtccgcct
ggggtcagaggcccaccaggaattgggggacaaaagggagagcctggtgctgcaggatca
ccggggcctcaaggagaacggggttttgcaggatctcgtggtgataaaggagaccgagga
cagtctggagaaaaaggacgtgacggctcacagggaacaccaggagaaccaggaaaacct
ggtcaagatgggaaaccgggcttgcctgggttcccaggagttctaggcagaccgggaaac
ccaggagagactggcatgagggggccaactggcccaatgggtcccaacgggcttccaggt
cccccaggtgtgaaggggaatcaaggagagccaggtgttggtgtccagggtcctccgggt
gcccaagggagcacaggtctgccaggaccaacaggtacccccggagctgtaggtccacaa
ggccctccaggactgtcaggccaggtgggtgaagcaggtaaaccaggggtacctggcaga
gatggtgtgcctggaaaagatggattacctggattatcaggaaagcagggcattgctgga
cctccaggccaggccggcttaaagggggagcagggagacagcggccccccagggaaggct
gtggctggaccccctggacctaaaggagaaaggggtcttaatggtgcaacactgccaggc
acggctggagagagaggcctacctggagaaaagggtgacaggggagacaaaggtgctgtt
ggctacaaaggagagcgaggagtggatggtgagccaggggagcctggagatgatggggca
cagggatcccctgggccaaaaggagataagggagagaagggcataggactggcaggccct
cctggtcgggttgggcctcaaggtttaaagggagatccaggccttcctggtccagctggt
cccccggggctgcaggggaagtctggggatgctgggcaacctggcctgagaggagaatcg
ggacaacaaggacctcctggaccacctggggagaggggtctccaaggctttgctggccgt
gcaggaaatgtcggacctcctggtccttctggaccgcctggacaggcaggctctcctggt
accaatggtgtcaaaggggacaagggggaggttggcatcggagtctccggcccccgagga
gagagaggagatgcagggccgagaggagaggagggccgtcctggcttggatggggagaga
ggggcaacgggtaccccagggattcgtggtattcggggagaaaagggagacgtggggctg
caaggtgacaaaggagagaagggggacactgtgctggtgggaggacctgctggagaaaag
ggcaacaaaggagaaacaggtgacaggggacccaaaggtgtgcagggagaaaaggggggg
aagggtcaagagggtcctgtaggggagcagggtcttaggggagagcctggagaaagagga
tccactgggttcccgggtgcccgtggccctggtggacagaagggagaagccggccaacct
ggagtacctggtgaatcgggtttaccaggaaaggacgggctgctggggcagaggggtgaa
aagggagaacttggcattgtcggactgagaggaatcaagggtgaccgaggacccaagggg
gcttgtggaggcgatggccctaaaggagagaagggagatgctggtattaatggacgatca
ggcctaccgggaagaaaaggcgaacagggggaaatcggaccatctggagccccagggacc
cccgggaaagagggactagtcggtcccaagggtgaccgtggttttgacgggcttgcagga
cccaaaggagctcagggagagaaaggtgaacggggtacgcctggcgtacctggtcctcct
ggtcccagaggagtggatggggtccagggcttgactggccctcagggaccagctggtgcg
aaaggcccggagggcctccagggacaaaagggagagagaggtccaatcggtcctgccatg
attggtccacgcggtattccagggatcccgggggaacgaggagaagcgggagagttgggc
ccagatggagccaagggagacagaggagagccaggcatgacggagtatgaggtcagagag
tatgtccgctcagagatgagtcagcactgtgcgtgtggaggttcaggtccaattaatcgg
tcccagcccccggtcagggctcggccttcaccagatcaacaactggtcctgaagggggag
gagggccgtgagctgcgtgtggtggtgaacaccaacgacccggactacgagcatatctac
tccatcgaggcctacgacgaccccttggacgagctgctctacttcactccctctgccaat
caaagcgatggtgaggttgtcaaagttgaaactgacaaaacagtcaaagttgaaccaaac
aaagcatccactgctgacgttacgaaaaaagcaaaagttacacttctgaaagcagtcaag
cccagatcagtcaggtccaagaggagagtcaaaggggaagctccagcagactcatgcttg
ctgcccatggaggaggggagctgtggacgatacactatgcggtggtactttaacaatcag
gttcaggcctgcaggcccttcatctacagcggctgtgaaggaaacgacaaccgcttcctc
cacctggaggagtgtgaggagctctgccttggggagaccgaaggtcctcgtcccttgaag
acagtcctatga

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