Etheostoma spectabile (orangethroat darter): 116688545
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Entry
116688545 CDS
T08457
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116688545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116688545
03036 Chromosome and associated proteins [BR:
esp03036
]
116688545
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116688545
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
116688545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
116688545
NCBI-ProteinID:
XP_032370537
LinkDB
All DBs
Position
4:complement(16458370..16471553)
Genome browser
AA seq
1556 aa
AA seq
DB search
MSASSKRRRATSPSSSVSGGGDLDDTSSTPGSGRKKRRISNVPPVDTIAVCHELFNAVRD
HKDDQGRQLCEIFLRVPKRRNQPDYYEVVSQPIDMTKIQYKLKSEDYNDVEQLTADFQLM
FNNARSFYKSDTEEYQAACKLWEVYLQTRSEFVQPGDGDEDDEDGDDMLDNPGMSTEDET
PTGNLKEVLEQLLEAIVSHADPSGRLVSELFQKLPSKMHYPDYYAIIKEPIDLRTIAQRI
QIGFYKSVNAMAKDIDLMAKNAKTYNEPGSQVFKDANTIKKVFIQRKTELEHAEPTKSSL
RIRNRRSGQGDRLSGVSVALHYGSESEDDPVLSGSVCYDEGESEAESQSSSMEMSNPIFQ
LYEAVRGARNNQGQVFSEPFQHLPSRREYPDYFQQIKQPIALQQIRAKMKNGEYETLEQM
EADLTLMFENAKRYNMPNSSIYKRAFRLQQILQAKKRELLRRDDEDGDSILSSDAGSIKR
KSHKKNVKKNRMKTLYAAVTEAREVGTNRRLCDLFMVKPLKKDYPDYYKVILEPMDLKTI
EHNVRNERYATEEALMEDMKLMFRNARHYNEEGSQVYNDADILEKILKDKRKELGPLPEE
DVGSPKLKLRKSGVSPKKSKYLTPLQQRLNELYDAVRNFTDRRGRRLSTIFLRLPSRAEL
PDYYATIKRPIDMERLRSHMAAGRYQDVEALVEDFALMFNNACIYNEPESLIYRDALVLH
RVLLETRKQQEGGEDSGPPAVGPLVRELIRNLFVSVMGHQDEEGRCYSDSLAEIPAVDPA
APEKPPLNFDVIRMNVDRGRYRRLDVFQEHMFEVLEKARRLHRTDSEIFEDAVELQQFFI
KIRDELCKNGEILQSSALIYTSKHLHNDVEQEKREKIPKEIEEDKLKMEEEEGHNKEGEK
AEDLPGEAWQSESETERVYSQDCSFENSTYHVGDFVYVEPSEPKLKSHIVCIERLWEDEA
GGKWLYGCWFYRPSETFHLATRKFLEKEVFKSDYYNKVSISKVRGKCVVLFVKDYFKMQP
EGYRAEDVYICESRYTARNKSFKKIKIWAMPASSVKLVPREVPLPVVRVASMFAKPDQDK
LTISYAGSGSFVDKEREDVPVEMSGGEPGCQYYEQLHHNNMWFKVGDCVYIQSHGLSKPR
VARIEKLWVQNGATFFFGPIFIHPEETDHEPTKMFYKREVFLSHLEETLPITCVIGKCMV
SSFKDYLSCRPTEVSEEDFLLCESRYIDTEKQMKKFKGLKRFSYSSKVVEDEIYYFRKLI
VPQKEASPLLDKKISELEVKLADIEDADDDMEDMDDDEAPQTPSMPQMQTPLAIDMDTMP
YTPSQSTPKVKGLSKKEGAKRKINMSGYILFSSEMRAVIKARHPDFSFGELSRLVGTEWR
NLEATKKAEYEERAARIVDQQERDRPPQKQASPRAGTPIGTMMGVVPSPSTMGMINQNMT
PVSGMMGAYGPPYMPMQGPHEGLLSVAPMSPHSAGGALLPLHLQQGMPGYPGMPHQGKGH
CPSHTCSVTSSRVSPAGGVYLVHIDSPSSRCSLVSTTSLKVYSHATPKTYRIHIHI
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgagctccaagaggagaagagccacttcaccctccagcagtgttagtggaggg
ggtgacctcgatgatacctcctctacacctggaagtggaagaaaaaaaagaagaatatct
aatgttcctccggtagatacgattgctgtatgccatgagctgttcaatgctgtcagggat
cacaaggatgaccaaggcaggcagctttgtgaaattttcctcagggtaccaaagagaagg
aatcagcctgattattatgaagtggtttcccagccaattgatatgacaaaaattcagtat
aaactgaagtcagaagattataatgatgtggagcagcttactgccgatttccagctcatg
ttcaacaatgccagatcgttttacaagagtgacactgaggagtatcaagctgcatgcaag
ctgtgggaggtatatttgcaaacgaggagtgagtttgtgcaacctggggacggagatgag
gatgatgaagatggtgatgatatgttggataatcccggaatgtccactgaagatgagacc
ccaactggcaatttgaaggaggtgcttgagcaactcttggaggctatagtgtcacacgct
gatccctcagggcgactggtcagtgaactgttccagaaattaccttccaaaatgcattac
ccagactactatgccattataaaggagcccatagatctgagaacgatcgctcaaagaatt
cagattggattctataaaagtgtcaatgcgatggctaaggacattgacctgatggccaaa
aatgccaaaacatacaatgaaccaggatctcaggttttcaaggatgctaacaccataaag
aaagtctttatccagcggaagactgaacttgaacacgctgaacccactaaatctagtcta
cgcatcaggaatcgcaggtctggccagggggaccgactatctggagtcagcgtagctctt
cactatggctcagagagtgaggacgaccctgtgctctctggctctgtgtgctacgatgag
ggagagtcagaggctgagagtcagagttctagtatggagatgagcaacccaatcttccag
ctgtatgaagctgtgaggggtgccaggaacaaccagggccaggtcttctctgaacctttc
cagcacctaccctctcgcagggaatatccagactactttcagcagatcaaacaacccatc
gctctgcagcagatccgggcaaagatgaagaacggcgagtatgaaactctggagcagatg
gaggctgacctcacgctgatgtttgagaacgcaaagcgctacaacatgcctaactcaagc
atttataaacgggcctttaggcttcagcagatcttgcaggccaaaaagagggaacttctc
aggagagacgatgaggatggagacagcattctgtcatctgatgcagggagcatcaagaga
aaaagccacaagaaaaatgtaaaaaagaacagaatgaaaaccttatacgccgcagtgact
gaggctagggaggttggcaccaatcgtcgtctttgtgatctgtttatggtcaaaccattg
aagaaggactatcctgactactataaagtcatccttgaaccaatggacctgaagaccatt
gagcacaacgtccgcaatgaacgctacgcgacagaggaagccctgatggaagacatgaag
ttgatgttccgaaacgctcggcattacaacgaggagggatctcaggtgtataatgatgct
gatattctggagaagatactgaaggacaagcgtaaggagttaggacctctgcctgaagaa
gatgtaggatctcccaaattgaaactaagaaagagtggtgtttctccaaagaagtccaaa
tacctcactcctctccagcagaggttaaatgagctctacgatgctgtgcgaaacttcact
gatcgtcgaggtcgccgtctaagcacaatcttcctccgtctgccatctcgtgccgagttg
cctgactactatgctacaatcaagagacccatcgatatggagcgcctgcgaagccatatg
gcggccggccgttatcaagacgtggaagccctggtggaggactttgctctcatgttcaac
aatgcctgcatttacaatgagccagagtctctcatctaccgggatgctctagtgttgcac
cgggtgctgcttgagacacgcaagcagcaggagggaggcgaggactcagggcctcctgct
gtgggacctctggtgagggagctgatcaggaacctgtttgtgtccgtgatgggccaccag
gatgaagagggccgatgctacagcgactcgctggctgagatccccgctgtggatccagcc
gcccctgagaaaccaccgcttaactttgatgttatcaggatgaacgtggaccgtggccgc
tataggagactggacgtcttccaggaacacatgttcgaagtgctggagaaggcaaggagg
ctgcacaggactgactctgagatatttgaggatgcggtggaactacaacagtttttcatt
aagatcagggatgaactatgcaagaatggagagattctgcagtcatctgcactcatttat
acatcaaaacacctgcacaatgacgtggagcaggaaaagagggagaaaattcccaaagag
attgaggaagacaagctgaagatggaggaagaggaggggcataacaaagagggtgagaaa
gcagaggacctgccaggagaggcatggcagtcagagtctgagacggagcgtgtgtacagc
caggactgcagctttgaaaacagcacctatcacgtgggggactttgtctacgtggagccg
tcagagccgaaactgaagtcacacatagtctgtatcgaacgcctgtgggaggatgaagca
ggtgggaagtggctctatggctgctggttctacaggccaagtgaaaccttccacctggca
acacgcaaattcctggaaaaggaggtcttcaagagcgactactacaacaaagtgtctatc
agtaaagttcggggcaaatgtgtggtcctgtttgtaaaggattatttcaaaatgcaacct
gagggctatagagccgaggatgtgtacatctgcgaatcccgttacactgccaggaacaag
tcgttcaagaagatcaagatatgggccatgcctgcgagctctgtgaaattggtccctcgg
gaggtgccgttgcccgtcgtccgagttgcttctatgtttgccaaacctgaccaagacaaa
ctgacaatttcatatgcaggcagtggcagttttgtggacaaggagagagaggatgtccct
gtggagatgagtggaggcgagcccggctgtcagtattatgaacagttacaccacaataac
atgtggtttaaagtgggagactgtgtttacatccagtcacatggtctgtcaaaaccccgg
gttgccaggatagagaagctgtgggtgcagaatggagctactttcttctttgggcccatc
ttcattcatcccgaggaaacagatcacgaacccacaaagatgttctacaagagggaagtg
tttctgagccatctggaggagaccttgcccattacctgtgtcataggcaaatgtatggtg
tcctcatttaaggactacctgtcatgcaggcctactgaggtttcagaagaggatttcctg
ctttgcgagagccgctacattgacacagagaagcagatgaaaaagttcaagggtctgaaa
cgcttctcatactcttccaaagtggtggaagatgagatctactatttcaggaagttgatc
gtcccacagaaagaagcatcgcctcttttggacaaaaagatcagtgagcttgaggttaaa
ctggcagatattgaggatgcagatgatgatatggaagatatggatgacgacgaggccccc
cagacgccttctatgcctcagatgcaaacccctcttgcaattgatatggacacaatgcca
tacactccttctcagtccacgcctaaggtgaagggattgtctaagaaggaaggggccaag
aggaagatcaacatgagtggctatatcttgttcagcagtgaaatgcgtgcagtcatcaaa
gctcgacacccagacttctcgtttggggagctgagtcgactcgtgggcacagagtggagg
aacctcgaggcaaccaagaaagcagagtatgaagaacgtgcagctagaatagtggatcaa
caagagcgtgacagaccacctcagaagcaagcgtcccctagagcaggtacccccataggg
acaatgatgggggtggtgccttcgcctagcactatgggaatgataaaccagaacatgaca
cctgtgtcaggcatgatgggagcttacggcccaccttacatgcccatgcagggcccccat
gagggcttgttgagtgtggccccaatgtcacctcactctgcagggggggccctcctgcct
cttcatctccagcaaggcatgcctgggtaccccggcatgcctcatcagggtaagggccac
tgtcctagccacacctgctcagtcacatccagtcgtgtctctcctgctggaggggtttac
ctggtccacatcgactcacctagcagtcggtgctctctggtctcaacaacctctctcaaa
gtgtactcacatgccacacctaaaacatacaggatccacatacacatttaa
DBGET
integrated database retrieval system
