Etheostoma spectabile (orangethroat darter): 116688555
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Entry
116688555 CDS
T08457
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03083
Polycomb repressive complex
esp04980
Cobalamin transport and metabolism
esp05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116688555
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
116688555
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116688555
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
esp01009
]
116688555
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116688555
03029 Mitochondrial biogenesis [BR:
esp03029
]
116688555
Protein phosphatases and associated proteins [BR:
esp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116688555
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
116688555
HMT complexes
COMPASS/SET1 complex
116688555
MLL-HCF complex
116688555
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
116688555
Mitochondrial biogenesis [BR:
esp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
116688555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
116688555
NCBI-ProteinID:
XP_032370557
LinkDB
All DBs
Position
4:complement(27216630..27230025)
Genome browser
AA seq
1763 aa
AA seq
DB search
MSAPGSAVSGTMASVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDEL
HVYNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWE
WKKLKAKNPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELR
AGSSVVGWDIPITYGVLPPPRESHTAVVYTEKTSRKSRLIIYGGMSGCRLGDLWTLDIDT
LTWNKPSVSGTAPLPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACL
NLDSMCWETVLMDTLEDNIPRARAGHCAVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYL
ETERPHAPARVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPATPASPAMSATPVQPV
NSPKSPSPAVAALSAQSLPQTGIAIVTNDSFFPTLPCPLSSLHQEQLQKPCTQSLICSLF
VTAILKVAAQQSATGTSVVTVRPSQPGKSPVTVTSLPPGVRMVVPAQTTQGSPIGSSPQM
SGMAALAAAAAATQKIPPSAGTVLNVPAGATILKTVAVSPGTTTMKMASPVMVSNPATRM
LKTAAAQVGTATASSPTNTRPIITVHKSGAVTVAQQAQVVTTVVGGVTKTITLVKSPLTM
GSSGTLISNLGKMMSVVQTKPVQTSAITGQASTNPLTQIIQTKGPLPAGTILKLVTSADG
KPTTIITTSQAGGTGNKPTILNISGVSPSTTKQGTTIIKTIPMSAIMTQPGATGVTSSAG
MKTPITILTTKVMTTGTPGKIITAVPKLGTAAGQQGLTQVVLKGAPGQPGTILRTVPMST
VGGVRLVTPVTVSAVKPTVTTLVVKGTTGVTTLGTVTGTVSSSLGGGTVDSSNASLVTPI
TTLGTIATLSSQVISPSAITVSTAQTSLTSASTLPSSTMTVQNQPTQVTLITTPSGVEAQ
PVQDLPVSILASPTSEQPSSTEAGSAGEGSGTVTLVCSNPPCETHETGTTNTATTSSAAI
GAGQVCSNPPCETHETGTTNTATTASSNMSAPRMCSNPPCETHETGTTNTATTASANMGS
DQASTATDQVKTVCSNPPYETHETGTTNTATQLSSNMNAGQTSTVQRLCSNPPCETHETG
TTNTQSTASSNMGSDRTSTATGQVQTVCSNPPCETHETGTTNTQSTASSSMGSDQTSTAT
GQVQTACSNPPCETHETGTTNTATTATCSMETGEGTAAQQTEEGAEGTSSTEVASTAATG
TVTTPQGRAITTVTQSTPAPGPSVPSISSITEGVSPSSTEEPMQTDETASAEAAPAVEGA
TAMQTQVEGEAATALNLPSELMSEGQGATLMVTGLSDEELAVTAAAEAAAQAAATEEAQA
LAIQAVLQAAQQAVMHEGNSTGESQQTTNIPIMLTQQELAALVQQQQQLQEAQAAAQQAA
MDTSLPTEGLAPADSLNDPSVESNGHNEMAAAVTSAVASLLPRTTAETLAPSSTFAPSVS
VASPAKLQAAAALAEVANGIEGEKQAPQPTPVKPVVKKENQWFDVGIVKVTNMVVTHFYM
PGDDSHGDDDSGIMPDYGQMKKMELQPGTAYKFRVAGINACGRGSFSEISAFKTCLPGFP
GAPCAIKISKSPDGAHLTWEPPSVTSGKIIEYSVYLAIQSNQTAEAKASTPAQLAFMRVY
CGPNPSCLVQSSSLSNAHIDYTTKPAIIFRIAARNEKGYGPATQVRWLQESGKDAASAKP
APKRPGTSPDTKATGPKKARTDQ
NT seq
5292 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcccctggttccgcggtgtctgggaccatggcgtcggttctgcagccgcgatgg
aaacgggttctggggtggtccggtcccgttccccggcccaggcatggacatagagctgta
gctataaaggagcttatggttgtctttggcggtggaaacgaagggattgtggacgaatta
catgtatacaacactgcaaccaaccagtggtttatcccagcagtccgtggtgatattccc
cctggttgtgctgcatatggttttgtctgtgatggcacaagattgctggtgtttggtggc
atggtggagtatggaaagtacagcaacgatctctatgaactacaggccagcagatgggaa
tggaaaaagttgaaagcaaaaaacccgaagaatggcccccctccttgtcctcgtcttggc
cacagtttttccctggttggcaacaaatgctacctgtttggtggactagccaatgacagc
gaggacccaaaaaacaacattcccagatacctaaatgatctgtacacacttgagctccgt
gcaggttccagtgtggttgggtgggatattccaattacatatggagttctgcctcctccc
cgtgagagtcacactgctgtggtatacacagaaaagacgagcaggaaatctcgcctcata
atctatggagggatgagtggttgccgccttggagatctgtggacacttgatattgatacc
ctgacatggaacaaaccatcagtaagtgggacagcaccgctccccagaagtctgcactct
gccactaccatcacaaacaagatgtatgtttttggaggatgggttccattggtaatggat
gacgtcaaagtggccacacacgagaaggagtggaagtgcacaaacactcttgcctgctta
aatctagactccatgtgttgggagacagtattgatggatactcttgaagacaacatcccc
agggcccgtgctggccactgtgctgtagccatcaattccagactctatgtttggagtggc
cgtgacggttatcgtaaagcttggaacaaccaagtctgttgtaaagacctctggtacctc
gaaacagagcgtccacacgcccctgctagggtgcagttagtccgtgccaacacaaactct
cttgaggtgagctggggtgctgtctcaactgctgacacgtacttactacagctgcagaaa
tatgacatccctgcaaccccagcctcgccagccatgagtgccacccctgtgcagcctgtg
aattctccaaagagcccctcaccggctgttgcagcactctctgctcagagcctaccccag
acaggtattgcaatagtgaccaatgattctttctttccaactctaccgtgtccattgtcg
tcactacaccaggaacaactgcaaaaaccctgcacacaaagtctcatctgttcccttttt
gttacagcgatcttgaaagttgcagctcaacagtctgccacgggcacatctgttgtcaca
gtccgccccagccagcctgggaaatcccctgtcactgtgacatcccttccgccaggtgtc
cgaatggtagtgcctgcccagactactcaaggatcgccaattggaagcagccctcaaatg
agtggcatggcagctttagctgcagcagctgccgcaacacagaagatcccgccctctgcg
ggcactgttctcaatgttcctgcaggcgccaccattctcaaaacagtagccgtttcacct
ggcacaaccacaatgaaaatggcttctccagtcatggtcagtaacccagccacccggatg
ctgaaaactgctgcagcccaggtgggcacagcaactgcgtcctctcccaccaacaccaga
cccatcatcactgtgcacaagtctggtgcagtcacagtggcccagcaggcccaagtggta
accactgtggtaggaggagtcaccaagacaattaccctggtcaagagtcctctcaccatg
ggaagcagtggcactctgatctccaaccttggcaagatgatgtctgtggtacaaaccaag
ccagtgcagacatcagctatcacaggccaggcttccactaaccctctcacacagatcata
cagacaaagggtcccctcccagccggcaccatcctgaaactagtgacctccgcagatggc
aagcccacaaccatcatcaccacttcccaggcaggaggcacaggaaacaagcccactata
ctgaacatcagcggtgtctctccctccaccactaagcagggcaccaccatcattaagacc
atccccatgtcggccatcatgacccagcctggagccacaggtgtgacaagcagtgcaggc
atgaaaacgcctatcacaatccttaccacaaaggtgatgaccactggaactcctggtaaa
atcatcactgcagtgcccaagctcggcactgccgctggccaacagggactgacacaggtg
gttttgaagggtgctcctgggcaacctggcactattttgcgcactgtgcctatgagcaca
gttggcggtgttcgacttgttacaccagtgacagtgtctgctgttaagcccactgttacc
actctggttgtcaaggggactactggtgttaccacacttgggactgtcactggtacagtc
tcctcaagcctgggaggaggcacggtggacagttccaacgcctctctggtcacccccatc
accacactgggaaccatcgctaccctgtctagtcaggtcattagcccatctgccataact
gtgtcaactgctcaaaccagcctgacttctgcctccacgttgccctcctctaccatgacc
gtacaaaaccagcccacccaggttactctgatcacaactcccagtggtgtagaagctcag
ccagtgcaggatttaccagtgtccatcctggcttcaccaacctctgagcagcccagctcc
actgaggctggatcagctggagagggttctgggactgtcaccctggtctgttctaacccg
ccctgcgagacccacgagacaggaaccaccaacacagccaccacctcctctgctgcaatt
ggagcaggacaggtgtgctccaacccgccatgtgaaacacatgaaacggggacaaccaac
acagcaacaactgcatcatcaaacatgtctgcgccgcgcatgtgctccaacccaccatgc
gagacccatgaaactgggacaactaacacagctaccacagcatcggctaacatgggaagc
gaccaggccagcacagcgacggaccaggtcaagacagtttgctccaacccaccctatgag
acccacgagacagggaccaccaacacagccacccagttgtcatctaacatgaatgcaggc
cagacgagcaccgtgcagaggttgtgctccaacccaccctgcgaaacacacgaaactggg
acaaccaacacccagtccacagcctcatccaacatgggaagcgaccggaccagcacagca
acaggccaggtccagacggtttgctccaacccaccctgtgaaacacatgaaactgggacc
accaacacccagtctacagcctcatccagcatgggaagcgaccagaccagcacagcaaca
ggccaggtccagacggcttgctccaacccaccctgtgaaacacacgaaactgggaccacc
aacacagctaccactgccacctgcagcatggagacaggcgaaggcacagcagcccagcag
acagaggagggagctgaaggtactagcagcacagaagtggcctctactgcagcaacgggc
acagttaccaccccccagggcagggccatcactactgtcactcagtccacaccagcccct
gggccatctgtaccttcgatctcatcaatcacagaaggtgtgagtcccagctccacagag
gaacctatgcaaactgatgagacggcatcagcggaagctgcacctgcagtggagggagcc
accgctatgcagacacaagtggagggagaagcagctacagcattgaatcttccctcggag
ctgatgtctgagggtcagggcgccacacttatggtgacagggctgtcggatgaggagttg
gctgtgactgcagcggcagaagccgctgctcaggcagcagccactgaagaagcccaggcc
cttgctatccaggctgtcctccaggcagctcagcaagctgttatgcatgagggcaattcc
actggagagagccagcaaaccaccaacatccccatcatgttgacccaacaggagcttgca
gcattggtccaacagcagcagcagctgcaggaggctcaggctgctgcacagcaggccgcc
atggacacaagcttgcctactgaaggcctcgcccctgctgacagcctcaacgacccctct
gtcgagagcaacggacacaatgagatggctgccgctgtcaccagtgctgtggcatcactg
ctgccacgtactactgctgagacacttgctccatcaagcacatttgcaccctctgtttca
gtggcaagtccagccaaactgcaagcagccgctgctctagcagaggtggccaatgggatc
gagggagaaaagcaagcccctcagccaacccccgtgaagcctgttgtaaaaaaagagaat
cagtggtttgatgttggaattgttaaagtgacaaatatggttgtcacccacttctatatg
ccaggagatgattctcacggagatgatgactctggcatcatgccagactacggccagatg
aagaaaatggagctgcagcctggaacagcttacaagttccgtgttgctggaatcaacgct
tgtggtcgtggatctttctccgagatatctgctttcaaaacctgcctgccaggcttccca
ggggcaccttgcgccatcaaaatcagcaagagcccagatggtgcccacctgacctgggag
ccaccctcggtgacgtccgggaagatcattgagtactctgtgtacttggccatccagagc
aaccagacagctgaagccaaggcctccaccccagcacagctagccttcatgcgggtgtac
tgtggacccaacccctcttgcttggtgcagtcgtccagcctctctaacgctcacattgac
tacaccaccaagccagccatcatcttccgcatcgccgcccgcaatgagaagggctatggt
cccgccacccaagttcgatggctgcaagaatctggcaaagatgccgcctctgcaaaacca
gcccccaaaagaccaggcacctctcctgatactaaggctactggtccaaagaaagcaagg
acggaccagtga
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