Etheostoma spectabile (orangethroat darter): 116688577
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Entry
116688577 CDS
T08457
Symbol
rbl1
Name
(RefSeq) LOW QUALITY PROTEIN: retinoblastoma-like protein 1
KO
K04681
retinoblastoma-like protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04110
Cell cycle
esp04218
Cellular senescence
esp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
116688577 (rbl1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116688577 (rbl1)
04218 Cellular senescence
116688577 (rbl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116688577 (rbl1)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Other transcription factors
Pocket domain Rb
116688577 (rbl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RB_A
RB_B
DUF3452
TFIIB
Rb_C
Motif
Other DBs
NCBI-GeneID:
116688577
NCBI-ProteinID:
XP_032370610
LinkDB
All DBs
Position
4:complement(33138138..33154720)
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AA seq
1063 aa
AA seq
DB search
MRGEESSDSESGRMEESSVRRSLETLCQELNMDEQTATETMENFTAIWNTYTLEGEVVHW
LACSLYAACRKGSTPTVGKGLMEGNCVSLTRILRTAKLSLIQFFSKMRKWADMASLSQNF
RLRMERLERNFEVSTVIFRKFEPIFMDMFQNPQGGEPPRQPRSRKHRRLPCHISDVFKFC
WTLFVYTKGNFSMIGDDLVNSYHLLLCCLDLVFGNALLCSNRKDLINPTFRGLPALYRAD
GHVSADEPPPCVLERLCELHDGLVVEAKGIKQHYFKPYIQKLYQKQILKGNEVHLTELLD
PQSFLDNNKAINREYEEYVLTVGDFDERVFLGADADEEIGTPRKIVQESSASQTNAQSQL
QQHVEKSGSLAPSTPLTGRVYLKEKDLLVTPVSSATQSVSRLQSMVAGLRAAPSENLLHI
FKSCSRNPTESIQSRVKTLGQTFKEHYTNDSEDMPGSHIDFAENRLKLAEILYYKILENV
MVQETKRLQGKDMSVLLEQDIFHCSLMACCLEVVLFSYSSQRTFPWIINIFKLTPFYFFK
VIEVFIRSEEGLSRDMVKHLNLIEEQVLESRAWSADSALWSVLQAAGNKVPTVEEVNFSS
SLDSGSGSTSGGQSHLPLVALSPIIHPRIREFRSGLGSARKDVPPSPLSVHDRYSSPAAG
SAKRRLFGDDPPARTPGVVPIGSPMTSPAKRLTYGSSGTLRIGPQGAPATVLSFPLQGLN
NDRTITLIPVQPCDSSGTITAQFLLTASPSRATIASAAPPAPEPQAGISRPRRTGSLALF
FRKVYHLASVRLRDLCVRLDVSSELRGKIWTCFEHALVHCTGLMRDRHIDQLLLCSVYIV
SKITKEAVTFHDIMKCYRSQPQASSHVYRSVLLRCTPMEQVTDENMEVDPVSGGESAEKP
NPVSGEANSDQSGEEERGDLIQFYNNVYVLKMKGFALRYATHDNRTDAPPLSPFPSVRAQ
PLSPRRVSQRHSLYVSPHKNSAGCLTPNSYTYRINSSPSKELSDINRMMXQGSVSRKRAF
TMEGDVMMSSGVDSPSKRACPENGSSPRAAXEVPDVVSERQSH
NT seq
3192 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcgaagagtcgtccgattctgagtcggggaggatggaggagagttcggtccgg
aggagtctggagacgttgtgtcaggagctgaacatggacgagcagactgccacagaaacc
atggagaacttcacggccatctggaacacgtacacactggagggagaggtggtccactgg
ctggcctgttcactgtatgcagcctgtaggaagggctccacccccacagtggggaaaggc
ttgatggaggggaactgtgtctccctcaccaggatcctccgcaccgccaaactcagtctg
atccagttcttctctaagatgaggaagtgggccgacatggccagcctctcccagaacttc
aggctgcgcatggagcggctggagcgcaactttgaggtttctacggtgatcttccgcaag
tttgagcccatcttcatggacatgtttcagaacccgcagggaggggagccgccacggcaa
ccgcgcagcaggaagcacaggagactgccgtgtcacatcagcgatgtgttcaagttctgt
tggactctgtttgtctacaccaaaggtaacttcagtatgattggagatgacctggttaac
tcgtaccaccttctgctttgctgtctggacctggtgtttggaaacgctctgctctgctcc
aacaggaaggacctcatcaaccccacattcagaggtctgccggccctgtaccgcgctgac
ggccacgtttcagcggacgagcctcccccgtgtgtgttggagaggttgtgtgagctgcac
gacgggctggtggtggaggccaaaggcatcaagcagcactacttcaaaccctacatacag
aaactgtaccagaagcagatcctgaaaggcaacgaggtgcatttgacagaactgttggat
cctcagagcttccttgataacaataaagccataaacagggagtatgaggagtacgtgttg
accgtgggggattttgatgagcgggtgtttctgggagccgatgccgacgaggaaatcggg
actccgaggaagattgttcaggagtcttctgccagccagacgaacgctcagagccagctg
caacaacatgtagagaagtcgggctctctcgctccctccacccctctgacggggcgagtc
tacctgaaggagaaggacctgctggtcacgcccgtctcctcggcgacgcagagtgtcagc
cggctgcagagcatggtggccgggttgagggcggcccccagtgaaaacctgcttcacatc
ttcaagtcttgctccagaaatcccacagagtccatacagagcagagtcaagacactggga
caaaccttcaaagaacattacaccaacgactcagaggacatgcccggctctcatatagac
tttgcagagaaccgtctaaagctggctgagatcctctactacaagatcctggagaacgtc
atggtgcaggagaccaaacggctgcaaggcaaagacatgagtgtgttattggagcaggat
atcttccactgctccctgatggcatgttgtctggaggtggtgttgttctcctacagctcc
cagagaaccttcccctggatcatcaacatcttcaagctgaccccattctacttttttaag
gtgatcgaggtgtttatccgctcagaggaaggcctgtccagagacatggtgaagcacctg
aacctgatcgaggagcaggttctggagagcagagcgtggagcgcagactctgccctgtgg
agcgtcttgcaggctgctgggaacaaggtccccaccgtggaggaggtaaatttttcctcc
agtctggactctggttctggttctactagcggaggtcagtcccacctgcctctagttgcc
ctctcccccatcatccacccccgcatcagggagttcagatcaggcctgggcagcgcacgc
aaagatgtgcctccctccccgctttcggtccatgacaggtacagctccccggcagctggc
agcgctaaacgccggctctttggtgacgaccctccagcccgaaccccaggggtggtcccc
atcgggagccccatgacgtcaccggccaaaaggttgacttacggctcaagcggcaccctg
aggatcggacctcagggcgcccctgccaccgtcctcagtttcccactgcaaggtttgaat
aacgaccgtactatcacactgatcccggttcagccgtgcgactcctctggaaccatcacg
gctcagttcctgctgaccgcctcgccgagccgcgccaccatcgcctctgcagctccccca
gcccccgagccccaggcaggcatcagccggccgcgacgtaccggctcactcgctctcttc
ttcaggaaggtgtaccacctggccagcgtacgtctgagggacctgtgtgtgaggttggac
gtctcgtcggagctgcgagggaaaatctggacgtgctttgagcacgctctggtgcactgc
actggtctgatgcgggaccgacacatcgaccagctgctgctgtgcagcgtctacatcgta
tccaaaatcaccaaagaggcggtcaccttccatgacatcatgaagtgttatcgcagccaa
ccacaggccagcagccatgtgtaccgcagtgtgttactgcgctgcactcccatggagcag
gtgaccgatgagaacatggaggtggatcctgtctcaggcggcgaatctgcagagaaaccc
aatccggtctcaggagaagcaaattcagaccaatcaggggaggaggagcggggcgacctc
atccagttctacaacaacgtctacgtcctgaagatgaaaggtttcgctctgcgttacgcc
acccacgataaccggacggacgcccctcctctctctccgttcccgtcggttcgggctcag
cctctctctcctcgtcgggtttctcagagacactcgctgtacgtctccccccacaagaac
tctgcaggctgcctcacccccaactcctacacctacaggatcaacagcagcccgtccaag
gagttatccgacatcaaccggatgatgnngcagggctcggtgagccggaagagggccttc
accatggagggggacgtgatgatgtcatccggcgtggactcccccagtaagagggcgtgt
ccagagaacggcagcagcccacgtgctgctngagaggtgccggacgtcgtgtcggagcgc
cagagccactga
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