Etheostoma spectabile (orangethroat darter): 116688621
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Entry
116688621 CDS
T08457
Name
(RefSeq) tumor necrosis factor receptor superfamily member 1B-like isoform X1
KO
K05141
tumor necrosis factor receptor superfamily member 1B
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04060
Cytokine-cytokine receptor interaction
esp04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
116688621
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
116688621
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
esp04050
]
116688621
04090 CD molecules [BR:
esp04090
]
116688621
Cytokine receptors [BR:
esp04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
116688621
CD molecules [BR:
esp04090
]
Proteins
116688621
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNFR_c6
DUF6112
Podoplanin
Syndecan
ECSCR
TMEM154
Motif
Other DBs
NCBI-GeneID:
116688621
NCBI-ProteinID:
XP_032370661
LinkDB
All DBs
Position
4:15000905..15008239
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AA seq
492 aa
AA seq
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MKDILVLLVLLNAETTKVCSQPYKADSDGNCLNSTTEYLLDGSELCCKKCPPGQRLKQEC
TETTETVCEKCSKDQYMENWNYAPNCFSCTKCKTNAGLQIGQSCSSTTMSRCVCQPGMYC
HMGFDDPYCSLCRKYSACKTGEGVSVPGRKNSDVMCERCPNGTFSDSRSSTDPCRPHTNC
HGRAVVVQGDATSDTVCEPEPQTSTKEPHTEIVFTTANTVMTTVLATSDSKVPGGLTDST
WSISLSVSEPVFNYSTKTTPPSTVSDSTLAAVIAGVLVFILFIAIILLVLCKSVWKKDAA
RFHPKVDANGNCESGDKINQGYLVETQLTSVTETSIEQQCLLQNGNACSGHSQYCNNTET
LAQTDGCSSQNSIGPLQSTVSLHNPHSALSEPRPLLSYSEPATPQPSIPTQSSSQPTSPQ
VLSPVTTSPHVNVNITFNINGSCGTPSVTPTDLIHVDSKLPFGEEDRSFSIPQQEAGKQS
LMSVQESESYSA
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacatacttgtactgctggttctgctgaatgccgaaactaccaaggtctgttct
cagccctataaagcagactcagatggaaactgtctcaactcaacaacagagtacctgtta
gatggttctgagttgtgctgcaagaaatgcccccctggacagcggctgaaacaagaatgc
accgaaactactgagactgtgtgtgaaaaatgctcaaaagaccagtacatggagaactgg
aactacgctccaaactgcttttcctgtaccaaatgcaaaacaaacgcaggtctgcagatt
ggtcagagctgctcctccaccacaatgtccaggtgtgtgtgccagcccgggatgtattgt
cacatgggctttgatgacccatactgctcactatgtagaaagtacagtgcttgcaaaact
ggtgaaggagtgtctgtgccaggaagaaaaaactcagacgtgatgtgtgaacggtgcccc
aatggaacgttctctgactcacgctcctcaacggacccctgtcggcctcatacaaactgt
catgggagggctgttgttgtacaaggtgacgctacctcggacacagtgtgtgaaccagag
cctcaaacctcaacaaaagagcctcacactgagattgtgtttacaactgcaaatacagtg
atgaccacagtattagcaacctcagactccaaggttccaggtggactgacagactccaca
tggtctatcagcctgtctgtttcagagccagtattcaactattcaacaaaaaccacgcca
ccaagcacagtatctgacagtacactggctgcagtcattgccggtgtccttgtattcatt
cttttcatcgcaatcattctgctggtcctttgtaaatcagtctggaagaaagatgctgca
agatttcatcctaaagtagatgcaaatggtaattgtgagagtggtgataagatcaatcag
ggttatttggtggaaacacagctgacttccgtcacagaaacctcaatagaacaacagtgt
ctgctgcagaatgggaatgcctgcagtggccacagtcagtactgtaacaatactgaaact
ttagcccaaacagacggctgcagcagccagaattccatcggccctttgcaatccaccgta
tctcttcacaatcctcactctgctctgtcggagcccaggcctttactttcctactcagag
ccagccaccccccagcccagcattcccacacagtcctcctctcagcccaccagcccacag
gtcctcagtccagtgaccaccagtccccacgtcaacgtcaacatcactttcaatatcaac
gggtcttgtgggacaccttctgtcacgcccacagatttgattcatgttgactctaaactc
ccctttggagaggaagataggtcctttagcattccacagcaagaagccggaaaacaatca
ctgatgtcagtacaggagagtgaaagttacagtgcatga
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