Etheostoma spectabile (orangethroat darter): 116688704
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Entry
116688704 CDS
T08457
Symbol
nisch
Name
(RefSeq) LOW QUALITY PROTEIN: nischarin
KO
K24095
nischarin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116688704 (nisch)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_4
PX
LRR_8
LRR_9
LRR_NXF1-5
LRR_6
PH_PLEKHM2
DUF5580
Importin_rep_6
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
116688704
NCBI-ProteinID:
XP_032370784
LinkDB
All DBs
Position
4:complement(36368625..36402463)
Genome browser
AA seq
1525 aa
AA seq
DB search
MEATPYREEVSERKVCVVGSELVENYTVYIIEVSDGEHRWTVKHRYSDFHDLHEKLTAEK
KVDRRLLPPKKMLGKNSKSLVERRQKELELYLQTLLLQFPQATPTPLAVFLHFHLYEING
ITAALAEELFHKGEQLLQAGEVFSLQPLQLYSVSQQLRLAKPTCCNGDAKTDLGHILDFT
CRLRYLKMSGTRGPVGTSNIQESSLPFDLSVFKSLLQIEISECSSQQIGGLSFLRSSLET
LSIHYSTETMMSILVPEASEFSQWEAEGAESGCPVTAVIPVWRNLTTLDMSHNGISTIDS
SVKLIPKVEFLDLSHNQLSTVENLQHLYNLVHVDLSYNRLRVLEAAHTRLGNIKTLSLAG
NQLDQLTGLTKLYSLVNLDLSHNQLAQLEEIRNISLLPCLEKLNLSNNPMCIIPDYRTKV
LAQFGDRAAEVCLDGNLTTEKELDTVEVLKAIQKAKEVKDRMSSGDKKISEETRLSAAAP
PHLSSSSPPSSSSCCSSAVSPPAVTSSSSSFSSSSTSSSCPVQQAVCPSQDVTSRGDAAL
PPNVPPVNAAPPPASFNANTHLLSADPAQVQQASAGLSEHTLCGAPTSTFITTTTTTTTT
TTTTNTVCCVCCSSSSRPVGTTCFSCSAACSPLLPSHLLSLSSFNKDFITQLSQLLSTTL
KEQKRKEEVEEEEEEEKEEEREEERSESRQIQTRVEGTEVGSPSPSSRDGYFEMGLDDSV
EETVCSSSSSTSLAVPPAEGPRGPQAELCEEEEDEEVQVSRVLWCYCLQVKEEVEQKEAC
LVLTDRLLGLLHLSDDITWTNQDADQEQKAPVEEVLSSLQVDLLLPYSQLQLSSQAELPD
SCLAFGLRAGPTRWYIFFEAEELRQIRSELTVLIQAAKSQTDPEPPNTPQLFPRSLINSW
ELEESQGAQGGYPAFLLPSSSSSSSYSSSAPDTHPLLSDIFSKREDPSLLSLLFLTHRHL
WVLKMDFRELAERERRPADHHHSSSSSSCCRLVRVPLGSMMLHPRERASQVGDRTCSSSC
PDPKHHHRRSHTVELLLGGQRLLLLFPLAQNRSSFLGELSQRRASLEGLKMIALPQPCRP
CPQQGRLRSTDQCCCTSTRKAHSTSSWDTSRLQVEEPAVPPLTPGLSPGXEASAGLGEQQ
LLTYXHSYIAVSEVEEVRQVLWLSVVLYKSPESELTCCLLLSTDTIYFLLEDSASTLGHH
SVLDILDSGDSDVCLCCCLSIRLSDLLSVNVGLFDQYFRVVGRSADHIVCCLSRDSYGTG
VFLQELMSALSLQQQLPPPEPSDQDFYSQFTNTNTGKMQNYELVHSSRVKFIYPSEEEMG
DLTFIVAERKTPASAASTPSRSFNVLLYLLVFQVQIPSSLPSQGSTLSGHSSSGSGSSPS
PVLQPRTLILTSTDVFLLDEDYVSYPLPDFAKEPPSRERYQLREARRIRDLDRVLLGYQT
YPQALTLVFDDLPGPDLLCHLTMDHFAAAGEEASPRGGGASSGAEGEVQWCVFVPGADSR
ERLISLLARQWEALCSRELPVELTG
NT seq
4578 nt
NT seq
+upstream
nt +downstream
nt
atggaggccaccccgtatcgagaggaggtttcggagaggaaagtgtgtgttgtcgggtcg
gagctggtggaaaactatactgtctacatcatcgaggtgtcggatggagagcacagatgg
actgtgaagcaccgctacagtgatttccacgacctccacgagaagctgacggcggagaag
aaggtggaccgacggctgcttcctcctaagaagatgctggggaagaactcaaagagtctg
gtggagcggcggcagaaagagctggagctctacctgcagacgttgctgctgcagttccca
caggccaccccgactccgctcgcagtcttcctgcacttccacctctatgagatcaacggc
atcacagcagctctggctgaggagttgttccataaaggtgagcagttgctgcaggcgggc
gaggtgttttctctgcagcctttgcagctctactccgtctcccagcagctgcgtctggcc
aaaccaacctgctgtaacggggacgccaagaccgacctgggacacatcctggacttcacc
tgcaggctgcgatacctgaagatgtctggtaccagaggcccagtaggcaccagcaacatc
caggagagcagtctcccctttgacctgtctgttttcaaatcactgctgcagatagagatc
agtgagtgcagctcccagcagattggaggtctctcgtttctgaggtccagtctggaaact
ctaagtatccactactccacagaaactatgatgtcaatccttgtcccagaggcgagcgag
ttctcacagtgggaggcggagggggccgagtcaggctgtcctgtgaccgctgtgatccct
gtgtggagaaacctgaccactctggacatgagccacaacggcatcagcaccatcgacagc
tcagtgaaactgatcccgaaggtggagtttctggatctgagccacaaccagctgtccaca
gtggaaaacctccagcacctgtacaatctggtccatgtggatctgtcttacaaccgtctg
cgggtcctggaagctgctcacacccgtctgggcaacatcaaaaccctgagcctggctggc
aaccagctggaccaactgaccggcctcacaaagctctactctctggtcaacctggacctc
agccacaaccagctggcccagttggaggagatcaggaacatcagccttctgccctgtctg
gagaaacttaacctgtccaacaaccccatgtgcatcatcccagactacagaaccaaagtc
ctggcccagtttggagaccgtgcagcagaggtttgtctggacgggaacctgacgacggag
aaggagctggacacagtggaagtgttgaaagccattcagaaagccaaagaagtcaaagac
aggatgagcagcggcgacaagaagatcagtgaggagaccaggctgtctgctgctgcacct
cctcacctctcctcttcctctcccccctcctcttcctcctgctgctcctctgctgtctct
cctcctgctgtcacctcctcctcctcctccttctcctcctcctctacctcctcctcctgt
ccggtccagcaggctgtctgccccagccaagatgtgacgagcagaggagacgctgccctt
ccccccaatgttccccctgtgaacgccgcacctccccccgcaagctttaacgccaacaca
cacctcctgtctgctgaccccgcccaggttcaacaagcgtctgccggtctgtctgaacac
acactctgtggagctcctacaagcacttttattactactactactactaccactactact
actactactacaaatacagtctgttgtgtctgctgctcttcttcctccagaccagttgga
accacttgcttctcctgcagcgcagcctgcagtcctctactcccttctcacctgctctcc
ctctcctccttcaacaaagacttcattacccagctctcccagcttctcagcaccaccctg
aaggagcagaagagaaaggaggaggtggaggaggaggaggaagaagagaaggaggaggag
agggaggaggagaggtctgaatccagacagattcagacccgtgtagagggcactgaggtg
ggaagtcccagtccaagctccagggacggatatttcgagatgggtctggatgactccgtg
gaggagacggtctgctcctcctcctcctccacgtcgctggctgttcctccggccgagggg
cccaggggcccccaggcggagctgtgtgaagaggaggaggacgaggaggtgcaggtcagc
agggttctgtggtgctactgtcttcaggtgaaggaggaggtggagcagaaggaggcgtgc
ctggtgctgacggaccggctgttgggcctgctacacctatcagatgatatcacatggacc
aatcaggacgcagaccaggagcagaaggctcctgtcgaggaggtgctgtcaagcctgcag
gtggacctcctgctgccgtactcccagctccagctctcctctcaagccgagctccctgac
tcctgcctggccttcggtctccgagccggtccgacccgctggtacatcttcttcgaggca
gaggagctccggcagatcaggagcgagctgacggtgctgatccaggcagcgaagtctcag
actgacccggagccccccaacactcctcagctcttcccccgctcactcatcaactcctgg
gagctggaggagagtcagggagcccagggaggctatccagctttcctcctcccctcctcc
tcctcctcctcctcctactcctcctctgccccggacacccacccgctcctgtcagacatc
ttctccaagagggaggaccccagcctcctctctctcctctttctcacccaccgacacctc
tgggtgctgaagatggatttcagagagctggcagaaagagagaggcggccggctgaccat
catcactcctcctcctcttcctcctgctgcaggctggtccgtgtgcccctcggctccatg
atgcttcaccccagagagagagcttctcaggtcggggacagaacctgcagctcctcctgt
cccgaccctaaacaccaccacaggaggagtcacactgtggagctgctgctgggcggtcag
aggctgctgctgctcttccctctggcccagaacaggagctccttcctgggggagctgagc
cagcggagagcctctctggaggggctgaagatgatcgccctgccccagccctgcaggccc
tgtccacagcaaggccgtctcagatccacagaccagtgctgttgtaccagtacaaggaaa
gcacacagcaccagcagctgggacacctcccgcctccaagtggaggaaccagccgtcccc
cccctcaccccaggtctctccccaggcnntgaagcttctgctgggcttggagaacagcag
ctgctgacctacntccacagctatatagcagtgtctgaggtggaggaggtgagacaggtc
ttgtggctgtctgtggttctctacaagtctccagagtctgagctcacctgctgtctgctg
ctctccactgacacaatctacttcctgttggaagactccgcctccacactcggccatcac
tcagtgttggacatattggactctggagattccgacgtctgtctgtgctgctgtctgtcc
attagactgtctgatctgctgtctgtcaacgtgggactgttcgaccaatacttcagagtc
gtaggtcgttcagccgatcacatcgtgtgctgtctcagccgggacagttatgggacgggc
gtcttccttcaggagctcatgtcggctctgagtctgcagcagcagcttcctcctccagag
ccatcagatcaggacttctactcgcagttcaccaacacaaacacaggtaagatgcagaac
tacgagctggtccacagcagcagggtgaagtttatctatcccagtgaggaggagatggga
gacctgaccttcatcgtggcagagaggaagactccggccagcgcagcgtcaacgccctcg
cgctccttcaacgtcctgctgtacctgctggtcttccaggtccagatccccagcagcctg
cccagccagggctccactctctcaggccactcctcctctggttctggctccagcccgtct
cctgtactccagcccaggacgctgatcctgaccagcactgacgtcttcctgttggacgag
gactacgtcagctatcctctgcccgacttcgccaaagaaccaccctccagggagcggtac
cagctgcgagaggctcggaggatccgggacctggaccgggtcctgttagggtaccagacg
taccctcaggctctgacccttgtgttcgatgacctgccaggtcccgacctgctctgccac
ctcaccatggaccacttcgccgcagcaggggaggaggcctcgcccagagggggcggagcc
agcagtggcgcggagggcgaggtgcagtggtgcgtctttgtccccggcgcggacagcaga
gagaggctgatctcactcctcgctcgccagtgggaggcgctgtgcagccgggagcttcct
gtggagctcaccggctga
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