Etheostoma spectabile (orangethroat darter): 116688852
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Entry
116688852 CDS
T08457
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2 isoform X1
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116688852 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116688852 (usp39)
Spliceosome [BR:
esp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
116688852 (usp39)
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Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
116688852
NCBI-ProteinID:
XP_032370832
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Position
5:7413335..7418868
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AA seq
518 aa
AA seq
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MVQEAMAHIQAAPTLTVVMVSLKREREAEVDDDDNEDRVPAKIGRGRVLEDRRSRHCPYL
DTINRSVLDFDFEKLCSISLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLH
TLKFYCLPDNYEIIDSSLEDITYVLKPTFTKQHIAGLDKQGKLYRAYDGTTYLPGIVGLN
NIKANDYANVVLQAFSNVPPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPR
NFKAHVSPHEMLQAVVLCSKKNFQITKQGDAVDFMTWFLNALHGALGGTKKRSSIIAKAF
QGSMRIFSKKLPHPDLTPEEKEALLVTEEYQEQMSESTFLFLTLDLPTAPLYKDEKEQLI
IPQVPLFNILGKFNGNTEKEYKTYKENFLKRFQLTKLPPYLVFCIKRFTKNNFFVEKNPT
IVNFPITNVDLREYLTEEAQVTEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEM
QDLQVTDILPQMITLSEAYIQIWKRQESDNGTNHHTGV
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggtgcaggaagccatggctcatatccaagcggcccccacgcttactgttgtgatggtt
tccctgaaacgagaaagagaggctgaagtggacgatgatgacaacgaagacagagtgcca
gccaaaataggcagaggacgtgtactagaagaccggagaagccgccactgtccttacctt
gacaccataaacaggagtgtgctggacttcgactttgagaaactctgctcaatctctctc
tcccacatcaatgtctatgcctgtcttatatgtgggaaatactttcaaggtagaggtttg
aagtcccatgcttacactcacagtgtgcagtttactcatcatgtgttcctgaatctgcac
acacttaagttttactgtctgccagacaactacgagatcattgactcttcactagaagat
atcacgtatgtgctaaaaccaacattcaccaagcagcacattgcggggctggacaagcag
ggtaaactgtaccgagcctacgatggtacgacctacctgccgggcattgtagggctcaat
aacatcaaagccaatgactacgccaatgtggtgttacaggctttttccaatgttccaccg
ttgcgaaactacttcctggaggaagaaaactacaggggaatccgccggccaccgggggac
atcatgttcctcttggtgcagaggtttggtgaactgatgcgcaaactttggaatccgaga
aatttcaaagctcatgtgtcaccacatgagatgctgcaggctgtggtgctgtgcagcaag
aagaatttccaaattaccaagcaaggagatgctgtggacttcatgacgtggttcttgaat
gctctgcatggtgctcttggaggcacaaagaaaagatcatcaatcattgccaaagcattt
caaggctccatgcggatcttctccaagaaacttccacacccggacttgactccggaagag
aaagaggcattgctcgtgacagaggagtaccaggagcagatgtctgagtccaccttcctg
tttctaacccttgacctcccaacagctccactgtacaaggatgagaaggagcagcttatt
atcccgcaggtccccctcttcaacatcctgggcaagttcaatggcaatacagagaaggag
tacaaaacctacaaagagaattttctcaaaaggttccagctgaccaaactgcctccgtac
ctcgtcttttgcatcaaaagattcaccaagaacaacttctttgtggaaaagaatcccaca
attgtcaacttccccatcacgaatgttgaccttcgtgagtacttgacagaagaagctcaa
gttacagagaaaaacacaacgtatgacctggtggccaacgtagtgcatgatgggaaaccc
accgagggagcatacagaatacatgttctgcatcatggaactgggaagtggtatgagatg
caggacctgcaagtgacggacattctcccccagatgattacgctgtcggaggcctacatc
cagatctggaagagacaagagagtgacaatggcacaaaccaccacaccggggtgtaa
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