Etheostoma spectabile (orangethroat darter): 116688890
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Entry
116688890 CDS
T08457
Name
(RefSeq) nipped-B-like protein A isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
116688890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
esp03036
]
116688890
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
116688890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
HEAT_GCN1_C
Cnd3
DUF8035
TPR_DNAAF5
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
116688890
NCBI-ProteinID:
XP_032370955
LinkDB
All DBs
Position
5:5824267..5858110
Genome browser
AA seq
2537 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLYNGRIAEEVTCLLGCRDEN
LASQLAHGLNQVSTEHIELKDNLGSDEPEGDAPLLLQTMLARNPGIFREKNVMQQPMVPP
YKITQNSMHSPAQPANFQPAAMSPNPPSRFVAPQTGSSSRYMGQNSPVPSPYTPQSPAPG
YIQQYPHQQPPSYNQHQQIQQVSVASPMVPGGIRNIHEGKVSGQMANTANHHSDRHGTED
YMNIVHRLSSEEGDSTMRNPSFSLRSPQSGCSPAGSEGTPKPGSRPPLILQSPPPYAPSP
REGGPDQKQPLQQRKKAPAVKEEKDMYDIVSSPNKDSTKLTLKLSRVKSNESDTPGDLPG
MDENSDNMEAELGFQQVPVLQQNLARLQQQQQAGGASGLQPPSSPYDEAELDALAEIERI
EREAASEKCSKEVQDKDKPLKKRKQDSFPLEPGAGGPGGPTGAPGSGSTGGGNAGKLTPQ
EATAAENGASRPPLMVSIDLQQAGRADGQLDPCLAAPIPALEAQRWPEEPASGPAAVEGS
DTALRLKPDGRPEVIKNRVDKHDSRRDGRESSKHRHDEKSSDRRADMPKSSNRGEHGRDR
DRESDRDRKHRSETGGRDRRSPDSRCRSDRDRYRASSTGEPGRSGSRHDGSKPASSASGA
HLPDSFPAQLLGGHSGALKNFQIPKIKRDKDGSGSNESEVWGQPKVKLERLGLVKDFENR
PKPVVVLKKLSVDQIQRIIRHSKSGKNRISSGKSGKSGMDPAVLKELPPELLAEIESTMP
LCERVKVNKRKRSTVNEKPKYAEVSSDDDFDANGESARKRQRRDKDRSWDMEERERRGSG
DHRKGGNRDSRRGSGSRYRDSSEEHSPPPSMSEIARKMKMKEKQKKRKAYEPKLTHEELM
DSSTFKRFLASIDNILDNLEDVDFTTMAADDDEIPQEFLLGKHQLNELGSESAKIKAMGI
TSRIPSDKLVKLLNILEKNIQDGSKLSTMMSHDHDAEDEEKLWRDLIMERVTKSADACLT
ALNIMTSLHMPKAVYIEDVIERVLQYTKYHLQNTLYPQYDPVYRVDPHGGGLLSSKAKRA
KCSTHKQRVIVMLYNKVCDIVSNMSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLC
AIKLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDQDGEPLYIQMVTAL
VLQLIQCVVHLPNDKDMFDEYDSKVDQDVLITNSYETAMRTAQNFLSVFLKKCGSKQGEE
DYRPLFENFVQDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTV
AARLRKDAVTSKMDQRSIDRILQESQGNDETQQLQKALLDYLEESAETDASLVFARKFYV
AQWFRDATTEAEKSMRNQNPKDEDSSDGPQHAKEMETTGEIMQRAEKRKKFLRNIIKTTP
AHFATLKMNSDTVDYEDSCLIVRYLASMRPFAQSFDIYLTQILRVLGESAIAVRTKAMKC
LSEVVAVDPSILARSDMQRGVHGRLMDNSTSVREAAVELLGKFVLSRPQLTEQYYDMLIE
RILDTGISVRKRVIKILRDICLEQPTFSKVTEMCVRMIRRVNDEEGIKKLVNETFQKLWF
TPTPAHDKETMTRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDASYKPAKKACVQLV
DNLVEHILKYEESLSENKGVNSTRLVACITTLYLFSKIRAQLMVKHAMTMQPYLTTKCNT
SNDFMVICNVAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVN
KVTHNYKFVWACFNRFYGALNKLKVQLQEDPNSTTLVANKPFLLRSLFTVGALARHFDFD
LEEFKGTNKVEIKEKVLELLIYFTKHEDEEVKTKAIIGLGFLVIMHPSQMFMPEVKTLYN
GILADSASSINLKIQILKNLQTYLQEEDTRMQEADREWKKLSKKEDLKEMGDISSGMSSS
IMQLYLKQVLEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPSMRNK
SDQQLVEIDKKYTGFIHMKAVAGMKMSYNLQQAIAPSRRTIIRGFRQDETHSALCSHLFT
MIRGNRQHRRAFLISLLNLFDDSSKTEVNMLLFVADNLACFPYQSQEEPLFIMHHIDITL
SVSGSNLLQTFKELLLKEPRRKEKKVKVKEWKNTSDGEDEEEKMNCDSPGDNDEEDSDGV
VRRPKKARKPVTDSESSESETDLDDLDLEDVEKVMRLVPDNPTGLLDFANSVQGILLLLV
LKQHLKNQYGFSDGKIQKYSPTESAKVYDKAVNRKSNIIFHPRQTIDFISNNIARATLTN
DVKKRIVRQYLDFKVLMEHLDPDEEDEEGEASASANIRNKAINALLGGSGPMSGPSPRNQ
AGPETDDDYSDDERTPGSSRRSRRAGDSSDPGRMSETLESMDVIALCCPKYKDRPQIARV
IQKTSNGYSIHWMAGSYSGPWADAKKRDGRKQVPWVDTIKESDIIYKKIALTSNHKLSNK
VVQTLRSLYAAREGGAS
NT seq
7614 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgcctcatgttcccattaccactcttgctgggatcgctagcctcaca
gacttgttgaaccagctgcccctcccttcccctctcccggccaccaccactaaaagcctc
ctatacaatgggaggattgcagaggaagttacctgcctactgggctgtcgggatgagaat
ctggcctcccagctagcccatggcctcaaccaggtctccacagagcacatagagctgaag
gacaacctgggtagcgatgagccagagggggatgcaccactgctgctgcagactatgctg
gccaggaaccctggcatcttcagggagaaaaatgttatgcagcaaccaatggtaccacca
tacaagataacccaaaattccatgcatagtcctgcccagccagcaaacttccagccggct
gccatgtctcccaatccaccaagccggtttgttgcgccccagactggttccagtagtcgg
tacatgggccagaacagtccagtacccagcccctacactcctcagagccctgcccctggc
tacatacagcagtatccccaccaacagccgcccagctataaccaacaccaacagatacaa
caagtatctgtggccagtcccatggttccaggtggcatacgaaatatccatgagggcaaa
gtatcggggcagatggccaacactgccaaccaccactcagacagacatggcactgaagac
tacatgaacattgtacaccgactgagcagtgaggagggtgactccaccatgaggaatcct
tctttctcgctgaggtctccacagtctggctgctccccagcagggagtgaaggaacgccc
aaaccaggttctcgtcctccgctgattctgcagtcaccacctccatatgcgccctcacca
agggagggaggacctgaccagaaacagccgctccagcaaagaaagaaggcaccagcagtg
aaagaggagaaagacatgtacgacattgtaagctccccaaacaaggactctacaaaactt
accctcaagctgtccagggtcaagtcaaacgagtccgataccccaggggatctgccagga
atggacgagaactctgacaatatggaggcagaactgggctttcagcaggtgcctgttctt
cagcaaaacctagctcgactgcaacaacagcagcaagctggtggtgccagtggtctccaa
cctcccagttccccttacgacgaggcagagctggatgccctcgctgaaatcgaaaggata
gaacgagaggcggccagtgagaagtgctccaaggaggtgcaagataaagacaagccactg
aagaagaggaaacaggactcttttcctctggagccaggcgcaggaggaccaggtggcccc
acaggtgctccaggcagtggatcaacaggagggggcaatgctggcaaactgaccccgcaa
gaggccaccgcagctgagaatggtgccagccgccctcccctcatggtgagcatcgacctc
cagcaggcaggccgagctgatggccagctcgacccctgtctggcggcccctattccagcc
cttgaggcccaacgctggcctgaagaaccagctagtgggccggctgcagtggagggttcc
gatacggctttgcggttgaaaccagatggacggccggaagtcatcaagaacagggtcgat
aaacatgacagcaggagagatggtcgggagtcatcaaagcaccgacatgacgagaagtcc
tctgacagacgggcagacatgccgaagtcatcaaaccgaggggaacacggacgagacagg
gaccgagaatctgacagagataggaagcatcggagcgagactggtggtcgagaccgacgc
tcccccgactcgcgctgtcgaagtgaccgagataggtatcgggcttcttccactggagag
cctggtcggagtggcagtcggcatgatggttccaaaccggcctcctctgcctctggtgct
catcttccagattctttccctgcccagctcctcggagggcatagtggcgcactgaagaac
ttccagatccctaagatcaaacgtgataaggatggcagtgggtcaaatgaaagtgaggtg
tggggacagcccaaagttaaactggagaggctcggtttggtgaaggactttgagaatagg
cccaagcctgtagtggttctgaaaaagctctctgttgaccagatccagaggatcatacgg
catagcaagtctggaaagaacaggatctcctcaggaaagtctggaaaaagtggtatggac
ccggcagttctgaaggagctgcccccagaactgctggcagagattgagtcaaccatgccc
ctgtgtgaaagggtgaaggtgaacaagaggaaacgaagcactgtaaatgagaagcccaaa
tacgctgaggtcagctcggatgacgattttgacgcaaatggagaatctgcaaggaagcgg
cagcgccgagacaaagacaggtcctgggatatggaagaaagggaacggcggggttcaggg
gatcatcggaaaggcgggaaccgggacagccgacgaggctcagggagccggtaccgagac
tcctccgaggaacattcacctccacccagcatgagtgaaattgccagaaaaatgaagatg
aaggagaaacagaagaaacggaaagcatatgaacccaagctgacccacgaagagttgatg
gactcgtccacattcaagaggttcttggcgagcattgacaacatactggataatctggag
gatgtggatttcaccaccatggcagcagatgatgatgagataccccaagaatttttgctt
ggtaaacaccagttgaatgagctgggcagcgagtctgccaagattaaggccatgggcatc
accagcaggatcccatcagacaagctggtgaagctgctgaacatactggagaagaatatc
caggatgggtccaagctctccaccatgatgagccatgaccatgatgctgaagatgaggag
aaactttggagagacctgataatggagagagtcacaaagtcagcagacgcctgtctgacg
gcgcttaacatcatgacctcattacacatgccgaaggctgtctacatagaagacgtcata
gagcgggtgctacaatataccaagtatcatcttcaaaacacactgtatccacaatacgac
ccagtctacagggtggaccctcatggaggtggcctgttaagctccaaggcaaagcgtgca
aaatgctccacacacaagcagcgtgtgattgtcatgttgtacaacaaagtatgcgacatt
gtcagcaacatgtctgagctcctagagatccagctacttacagacacaactattctccag
gtttcttctatgggaatcactccattctttgtggagaatgtcagtgagctgcagctgtgt
gccattaaactagttacagcagtgttctcacgttatgagaagcatcggcagctgatctta
gaggagatcttcacctctttggccagactgccaaccagcaaacgctctctcaggaatttc
cggctgaacagctcagaccaggatggagagccattgtatatccaaatggtgacggctctg
gtgctgcagctaatccagtgtgtggtccacctccccaacgacaaggacatgttcgacgag
tacgacagcaaggtggatcaagatgtattgataaccaactcctatgagacggcaatgaga
acagcacaaaacttcctctcagtcttcctcaaaaagtgtggcagtaaacagggagaagaa
gattaccggccattgtttgagaactttgtacaggacctgctctccacagtaaacaagcca
gagtggcctgctgcagagctgctgctcagtctacttggtagactactggtacaccagttc
agtaataagcagacagagatggctctgagagtagcatctctggactacctgggcacagtg
gctgcccgtctgaggaaggacgctgtcaccagcaagatggaccagagatcaattgatcga
atcctccaagagtctcaaggtaatgatgagacccagcagctgcagaaggctctactggac
tacttggaagagagtgctgagaccgatgcctcactggtgtttgctagaaagttctacgtt
gcccagtggttccgggacgccaccacggaggctgagaagtccatgcggaaccagaaccca
aaggatgaggactcatcggacggaccacaacatgccaaggagatggagaccaccggtgaa
attatgcagcgtgctgagaagcgcaagaaattcctgcgcaacatcataaagaccacgccg
gctcattttgccaccctaaaaatgaactctgacactgtggactatgaggactcctgtctg
attgtgcgttatttggcctccatgaggccgttcgcccagagctttgatatttatttaact
cagatcttgcgagtcctcggggaaagtgccatcgctgtaaggaccaaagccatgaaatgt
ttgtctgaggttgtggctgtggaccccagcatactggcgaggtccgacatgcagcgaggc
gtccatggccgtttgatggacaactctaccagtgtgagagaggcagctgtagagctgctg
ggcaaatttgtgctcagcagaccccaactcaccgagcagtactatgacatgctcatagaa
aggatactggacactggtatcagcgtgagaaaacgggtgatcaagatcctcagagacatc
tgcctggagcagccaaccttcagtaaggttactgagatgtgtgtgcggatgatccgcagg
gtcaatgatgaggaaggcatcaagaaattggtgaatgagacattccagaagttgtggttt
actccgactccagcccatgacaaggagaccatgaccagaaagatcctcaacatcactgat
gtggttgcagcgtgtcgagacaccggctatgactggtttgagcagcttcttcagaatctt
ctaaagtctgaagaggatgcatcctataaaccagcaaaaaaggcctgtgttcagctagtt
gacaatctggtagagcacatcctcaaatacgaggagtctctttcagagaacaaaggtgta
aactcaacacggctagtggcgtgtatcaccaccctgtacttattcagcaagatcagagcc
cagctcatggtcaaacatgcaatgaccatgcaaccctacctgaccacaaagtgtaacact
tccaatgacttcatggtcatctgtaacgtggcaaagatcttggagcttgtggtacctctg
atggaacatcccagtgaaactttccttgccaccatcgaagaagacctcatgaaactcatc
atcaaatacggcatgacggttgtccagcactgtgtgagctgtcttggagctgttgtcaac
aaagtcacacacaactataagtttgtctgggcttgcttcaacagattctatggcgcactt
aacaagctgaaggttcaacttcaggaggatcctaacagcacaacattggtagcaaacaag
cctttcctgctgcggtcgctcttcactgtgggtgctctggcccgccactttgattttgat
ctggaggagttcaagggcaccaacaaggttgagatcaaggagaaagttctggagttgctg
atatacttcaccaaacatgaggacgaggaggtcaagaccaaagccatcattggattaggc
ttcctcgtgatcatgcatcccagccagatgtttatgcctgaggtgaagaccttgtacaat
ggcatcctggctgacagtgcctcctccatcaacctcaaaatccagatcctcaaaaacctc
cagacataccttcaagaggaggacacgcggatgcaggaggcagacagagaatggaaaaaa
ctgtccaaaaaggaggatctgaaggagatgggagacatctcttcagggatgagcagctcc
atcatgcagctttatcttaaacaggtgctggaggcattcttccacacccagtccagtgta
cggcactttgctctcaacgtcatagctctcacactcaaccagggtctcatccatcctgtt
cagtgtgtaccctacctcattgctatgggaacagaccccgagcccagcatgaggaacaaa
tctgatcagcagctggtggagattgacaagaagtacacaggattcatccatatgaaagca
gttgctgggatgaagatgtcatacaacttgcagcaggccatcgcgccgtctcgtagaacc
atcataagaggtttcagacaggacgagactcactcagcactctgctcccacctcttcacg
atgatccgggggaaccggcagcaccggagggcgttcctcatctcactgctgaacctcttc
gatgacagttctaagacggaagtaaacatgctgctgtttgtagcagacaacctcgcctgt
ttcccataccagagccaggaggagcctctcttcattatgcatcacatagacatcaccctg
tctgtttctggtagcaacttgttgcaaaccttcaaagagcttctgctaaaggagccgagg
cgtaaggagaagaaggtaaaggtaaaggagtggaagaacacgtcagatggggaggatgaa
gaggagaagatgaactgcgattctccaggggacaatgatgaagaagacagtgacggtgtg
gtacggcggcctaaaaaagccagaaaacctgttacagactctgagagctcagagtcagaa
actgatctggacgatttggatttggaagatgtggaaaaagtaatgaggctcgtcccagat
aatcccactggtctcttggactttgccaattctgttcagggcatcctattgctgctggtg
ctcaaacagcatctgaagaaccaatacggattctctgacggaaaaattcagaagtactct
ccgacagagtcagccaaggtgtacgataaggcagtgaaccgaaaaagcaacattatcttc
cacccacgtcagaccatcgacttcatctccaacaacatagctcgcgccacactgacaaac
gatgtcaagaagcgaattgtcagacagtacctagatttcaaggttctgatggaacatctg
gacccagacgaggaggatgaggagggagaagcgtctgcgagcgctaacatcagaaacaaa
gccataaatgccctactgggaggctccggccccatgtcaggacccagcccgcgcaatcag
gcaggaccagagacagatgacgattatagtgacgacgaaaggaccccagggtcctctcga
cggtcaaggcgagctggtgactcctctgaccccggtcgtatgagcgagacattggaatct
atggatgtgattgccctttgctgccccaaatacaaggaccggccgcaaatagctcgagtc
atccagaagacctccaatggatatagcatccactggatggccggctcctactcggggcct
tgggcagatgccaagaaacgcgatggccgcaaacaggtgccttgggtggacactattaag
gagtcggacatcatttacaagaagattgccttgaccagcaaccacaaactgagcaacaaa
gtagtacagactttacgctcactgtatgcagcgcgggaagggggagctagctaa
DBGET
integrated database retrieval system
