Etheostoma spectabile (orangethroat darter): 116688918
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Entry
116688918 CDS
T08457
Symbol
nedd4
Name
(RefSeq) E3 ubiquitin-protein ligase NEDD4 isoform X1
KO
K10591
E3 ubiquitin-protein ligase NEDD4 [EC:
2.3.2.26
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04120
Ubiquitin mediated proteolysis
esp04144
Endocytosis
esp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116688918 (nedd4)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116688918 (nedd4)
09144 Cellular community - eukaryotes
04530 Tight junction
116688918 (nedd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116688918 (nedd4)
04121 Ubiquitin system [BR:
esp04121
]
116688918 (nedd4)
03029 Mitochondrial biogenesis [BR:
esp03029
]
116688918 (nedd4)
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
116688918 (nedd4)
Membrane trafficking [BR:
esp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
116688918 (nedd4)
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
HECT type E3
116688918 (nedd4)
Mitochondrial biogenesis [BR:
esp03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
116688918 (nedd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
Motif
Other DBs
NCBI-GeneID:
116688918
NCBI-ProteinID:
XP_032371004
LinkDB
All DBs
Position
1:complement(5632712..5663506)
Genome browser
AA seq
931 aa
AA seq
DB search
MASLTPQIRGLQTDEEENRVLKVKVIAGIGLAKKDILGASDPYTRLSLYDPINGEITSLQ
TKTKKKTLDPKWNEEFFFRVDPRRHRLLLEVFDENRLTRDDFLGQVDIPLNQIPTENPNT
ERPYTFKDFLLHPRSHKSRIKGHLRLKMTYLPKNPDSEEETTEQTEDMDPGWEFLEAQDM
SGPRQNQLLPALPPGWEERQDNLGRTYFVNHESRTTQWTRPTIQNVDGEMQRRQNNNIDA
EHAIITRRQISDHDENTTRESPESWEIITEDVSTLYHSNNQLTSSPPHGPAEFHPSRAEL
RNSHISRATAGELRTYQTDHANNSSHSSLRGNAQTSTGEEHPVNPVLIPTSTGLPPGWEE
KRDSKGRRYFVNHNSRTTSWTRPLIQKTSEVPVALAAAAAAATQSGAGVAQSLTPPLPSM
SPEESPQHTPSPEATHTSGFLPAGWEVRSAPNGRPFFIDHNTKTTTWVRKQQTSDVLLPL
IEDPRLKIPVQTRKRLPLDPSDLGPLPPGWEERVHSDGRIFYIDHNTRTTQWDDPRLQNS
AITGPAVPYSRDYKQKYDYFRKKMKKPADIPNRFELKLKRNAVLEDSYRRILSVKRADLL
KARLWVEFEGEKGLDYGGVAREWFFLMSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNE
DHLSYFKFIGRVAGMAVYHGKLLDAFFIRPFYKMMLQKPITLQDMESVDSEYFNSLKWIL
ENDPKDLDLRFTIDEELFGQTRQHELKQGGAEIVITNENKKEYIHLVMQWRFVNRIQKQM
SAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVNDWRENTKYKNSYCSNHVVIQWFW
KTVLLMDAEKRIRLLQFVTGTSRVPMNGFAELYGSNGPQLFTIEQWGTRDKLPRAHTCFN
RLDLPPYESFEELREKLHIAIENAQGFDGVD
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacttactccacagatccgaggacttcagacagatgaggaagaaaacagagtc
cttaaagtgaaagtcattgctggaattgggctggccaaaaaagatatactgggagccagc
gatccatatacaagactatccctctatgaccctatcaatggagaaatcacaagtcttcag
accaaaacaaagaaaaagacactggacccaaaatggaatgaagaattctttttccgagtt
gatcccagaaggcatcgtctgctgttggaagtgtttgatgagaaccgcctgacacgtgat
gactttctgggacaggtggacatcccattaaatcagataccgacagaaaatcctaataca
gaaagaccatacacattcaaggattttctgcttcacccacgaagccacaagtccagaatc
aaaggtcacctgcgtctcaaaatgacctacctgccaaaaaatccagattcagaggaagaa
acaacagaacagactgaggacatggatcctggttgggagtttctggaggctcaggacatg
tcaggtcccagacaaaatcagctgctgcctgctctgccccctggctgggaggagcggcag
gacaacctgggaagaacctactttgtcaatcatgagagcagaaccacacagtggacacga
cccacaattcagaacgttgatggggagatgcaaagaagacagaacaataacatagatgca
gagcatgctattattacacgcagacagatctcggaccatgatgagaacaccacacgagag
tctcctgagagctgggagatcattacagaggatgtgtccaccttgtaccacagcaataac
cagctcacatcaagtccaccccacgggcctgcagagttccacccgtcccgcgctgagctg
agaaacagtcacatttctcgggccacagctggcgaactgcgcacttaccagacggatcat
gctaataattcaagccattccagtctcagaggaaatgcccagacttcaacaggagaggaa
catcctgttaatcctgtgctaattccaacctcaactgggctgcctccaggctgggaggag
aagcgagacagtaaagggagacgctactttgtcaaccacaacagccgaaccacttcatgg
acacgacccctcattcagaaaacctcagaggtgccagtagcactagcagcagctgcagca
gcagcaacacagagtggggcaggtgtagcccagagccttactccacccttgccatccatg
tccccagaggaatctcctcagcacaccccaagcccagaggccacacatacatctggcttc
ctgccagctggttgggaggttcgcagtgctcccaatggaagaccgtttttcatcgaccac
aacactaagacaactacttgggtgagaaagcagcagacttcagatgtgcttttacctcta
atcgaagatcccaggctaaagatccctgtgcagacgaggaagagactcccactcgatcca
tctgatcttggccctctgccgcctggctgggaggagagggtccacagtgatggcagaata
ttctacatagatcacaacaccaggaccacacaatgggatgatcccagattacagaactca
gctataactggaccagcagtgccttattccagagattataaacagaagtatgactacttc
cggaagaaaatgaagaaaccggctgacatcccaaaccgctttgagctgaaactgaaacgt
aatgcagtgctggaggactcgtaccggcgcatcctatcagtgaagagggcggacctgctg
aaggcaagactgtgggtggaatttgagggagaaaaaggactggactatggtggcgtggcc
agggaatggttcttcctcatgtccaaggagatgttcaacccatactatggactgtttgag
tattctgccacggacaactacacactgcagattaaccccaactcaggtttatgtaatgag
gaccacctgtcctacttcaagttcatcggccgtgtggcaggcatggccgtttatcacggc
aaactgctcgatgcattcttcattcggcctttctacaagatgatgctgcagaagcccatc
actctccaggacatggagtctgttgacagtgaatatttcaactccttgaagtggattttg
gagaacgacccaaaagacttggacttaaggttcaccatcgatgaagagctgtttggacag
actcgccagcatgaactgaagcagggtggggcagagattgtcatcactaatgaaaacaag
aaggagtacatccatctggtaatgcagtggaggtttgtgaacaggatacagaaacagatg
tctgccttcaaagagggattctttgagttgatacctcaagatctgatcaagatctttgat
gagaatgagctcgagctgctcatgtgtggtcttggcgatgtggatgtgaatgactggaga
gagaacaccaagtacaagaacagctattgctccaaccacgttgttatccagtggttttgg
aaaacggttctgttgatggatgcagaaaagcgaatcagactcttacagtttgtgacagga
acatcaagggtcccaatgaatggctttgctgaactctatgggtctaacggaccacagctg
ttcactattgagcagtggggaacacgtgataaactcccccgagcccacacatgcttcaat
cgactggacctgcctccttatgagtcttttgaggagctgagggaaaaacttcacatcgcc
attgagaatgcacaaggcttcgacggggtggattag
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