Etheostoma spectabile (orangethroat darter): 116689162
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Entry
116689162 CDS
T08457
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03013
Nucleocytoplasmic transport
esp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116689162 (gle1)
03015 mRNA surveillance pathway
116689162 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116689162 (gle1)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116689162 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
116689162
NCBI-ProteinID:
XP_032371466
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Position
5:complement(13661644..13670266)
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AA seq
742 aa
AA seq
DB search
MPSENQKWDTLQALKNSPKGNITYDPFWSERGEHILAGCKEAFSLSSTSGIILERLCTLP
LQKSCFLGSSSGDSSPGLSEEISASVSFTGSTSDLNVMHTALSSAPSSKTEREQAVSDEA
KNEDPEGDVSEVSSPALLPGISLLSPKAMVMAGRIIKFEVEQREKAKMALKQRQEMQEKL
VAAVATSESEQLKRFEEFMELKQRQEYQSMRDMMDRETKESIGRQEKLKEEQRHRMKILN
LRLREAEQQRLREAELERQRQADGRERLRNLNTIQEEILQLNQLLEPSTQTKTNLPPAIL
SSCCTRGNQLCSQLSEVVRKTAEGEFPSVEDMTVAERALHEMRALIRLMQEEVAKAQEKK
KKEQEDEEERRKQAELRAQQEAQKKAAESAKEKAKRKGLQNSAEDSTLKWYRQLQESAAQ
CAQSYEQLNSPKDSQTKRLKLELQKAASIPVSQISSNSGSQLREIFDKIDKLLSGRAVVS
GGKSVSTSQHPQGLDFVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWELHPRVGEL
ILAHLHKKCPYAVPHYPPMKDGTPVEDYQRILGYRVDDSGVEGQDSFLKRMSGMIRLYAA
MIQLRWPYGSKQGSAPHGLNHGWRWLAQMLNMEPLADITATLLFDFLEVCGNALMKQYQI
QFWKLILLLKEEYFPRIEAVTESGQMGSVIRLKQFLETSLQSRDPSSAQRPAELHVLGLL
MRRRRRRKEEEEPCWMLLHDAI
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgccttctgaaaatcaaaaatgggacactttacaggctttgaaaaattccccaaaggga
aatatcacatacgacccgttctggtcggaaaggggcgagcatattttggcaggatgcaaa
gaggccttcagcctgtcttcgacctctgggatcatactggagcgtctctgcaccttgccc
ctgcagaagtcttgctttctgggctccagctccggagactccagccctgggctctctgag
gagatctccgcctcggtttcctttacaggatctacctccgacctcaacgtcatgcacact
gcactttcttcagccccgtcttcaaagactgagcgtgagcaggctgttagtgatgaggcg
aagaatgaagatccagagggagatgtcagcgaagtttccagtcctgcgttactacctggg
atttccctgctgtcgcccaaggccatggtgatggcgggccgcattatcaagtttgaggtg
gaacaacgagaaaaagccaagatggcactcaaacagcggcaggagatgcaggagaagttg
gtggcggcggtggccacctccgagtctgagcagctgaaacgctttgaggagttcatggag
ctgaagcagaggcaggagtaccagagcatgagggacatgatggacagagaaaccaaagag
agcatcgggcgtcaagagaagctgaaggaagagcagcgacacagaatgaagatcctcaac
ctgcgtctgagggaggcggagcagcagcgcctgcgggaggcggaactcgagcgtcagcgg
caggcggacggccgggagcggctgcgtaacctcaacaccatccaggaggagatcctgcag
ctcaaccagctgctggagccgtccacccagaccaaaaccaatctcccaccggccatcctc
agctcctgctgcacccgcgggaaccagctctgctcccagctgtcagaggtggtgcggaag
acggcagagggcgagtttcccagcgtagaggacatgaccgtggccgagcgagccctccac
gagatgagggcgctgatccggctgatgcaggaagaggtcgccaaggctcaggagaagaag
aagaaggagcaggaagatgaagaggagcgcaggaagcaggcggagctgcgggcgcagcag
gaagcgcagaagaaggcggcggagtcggccaaagagaaggcaaagaggaaagggctgcag
aacagcgctgaagacagcacgctgaaatggtacaggcagctgcaggagtcggctgctcag
tgtgcacagtcctacgaacagctcaactccccaaaagactcccagacaaagaggctgaag
ctggagctccagaaagcggcctccatccccgtcagtcagatctccagcaactccggatcc
cagctccgagaaatctttgacaagattgacaagctgctgtctgggcgggcggtggtgtcg
gggggcaagtctgtctccacctcccagcatccacagggcctggactttgtcagctacaaa
ctggctgagaagtttgtgaaacaaggagaagaggaggtggcctctcaccacgaagccgct
ttccccatcgccgtggtagcctccggcgtctgggagctgcaccctcgagtgggcgagctc
atcctcgcccacctgcacaagaaatgtccatacgcggtcccacattaccctccgatgaag
gacggcacacctgtggaggactaccagaggattcttggttaccgcgtggacgactccggc
gttgaaggccaggacagtttcctgaagaggatgtcagggatgatccgtctctacgcggcc
atgatccagctgaggtggccctacggctccaagcaggggtctgctcctcacggtctgaac
cacggctggcgctggttggctcagatgctcaacatggagcctctggctgacatcacggca
acactgctgtttgactttcttgaggtctgtggtaatgctttgatgaagcagtatcagatc
cagttctggaaactcatcctgcttcttaaagaggaatacttccccagaattgaagcggtg
accgaaagtggacagatgggctcagtcatcagactcaaacagtttctcgagacctcgctg
cagagccgagatccgtcctccgcccaaaggccagctgagctccatgttctggggctcctg
atgaggaggaggaggaggaggaaggaggaggaggagccgtgttggatgttgctgcatgac
gccatttag
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