Etheostoma spectabile (orangethroat darter): 116689195
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Entry
116689195 CDS
T08457
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B-like
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04010
MAPK signaling pathway
esp04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
116689195
04020 Calcium signaling pathway
116689195
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
esp04040
]
116689195
Ion channels [BR:
esp04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
116689195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
116689195
NCBI-ProteinID:
XP_032371500
LinkDB
All DBs
Position
5:complement(2479783..2742146)
Genome browser
AA seq
2414 aa
AA seq
DB search
MARFDDELSSRYGGMCPAGPARGASRLPGPPGVQRMYKQTMAQRARTMAIYNPIPVKHSC
LSVNRSLFIFSEDNIIRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPASDKTPMSE
RLDDTEPYFIGIFCFEAGIKIIALGFAFHKGTYLRNGWNVMDFVVVLTGILATVGADFDL
RTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGLDFYMGK
FHRTCFRIDTDEQAADFPCGLEAPARTCANGTACREYWIGPNYGITNFDNILFAVLTVFQ
CITMEGWVDILYNANDASGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVEKR
QEFLKLRRQQQIERELTGYLEWICKAEEVMLAEEDKNAEEKSLDGAWYKRKNNNSVMKRT
KKSKNDLINAEEGEDHFTDISSAGSPFTRASLKSKNENSSYFKRKEKRIRFTIRRLVKSQ
SFYWTVLCLVGLNTLCVAIVHYDQPEWLTFALYLAEFVFLGLFLAEMSMKMYGLGPQNYF
HSSFNCFDFGVIIGSIFEVIWAAIKPGASFGISVLRALRLLRIFKVTKYWNSLRNLVVSL
LNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFEDETPTTNFDTFPAAILTVFQILTG
EDWNAVMYHGIESQGGVHRGMFSSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDE
EEQEVAINKKLALQKAMEVKEVSPMSATNMSITAFLTRSRGNAHSSSSSICSVNSLSSVI
TPSGRAASYVCTPVHYLSKEQQKSMKTMSVWEQRANQLRRQNQASCEALYSELDLEERLR
LSSALNIRPDMKTHLDRPLVVEPRDGPLLAGHQHHHHKPSMPEEAETTTDPPPPVPHQAR
RHHRHRDRDRARTKEGTNENSGTSKDGGHHVHHSRSKDHDSSRGKEGKSERSRSQEGGRR
HHHQSSVDDSGGGGAMSEREHRHHHSHRQSRGGNGTVNSGGRGERRSRHKNGRSSNRDGD
RNSRGDSGANGERRRHRPHGSRGQSTVEVEVSNERETGHRFGDSEGEVLAISKQGSEGVN
CPPDRPEDSDNQRNITRTGQTSIHIPPVTITSPPGDTTLMQINSIDCETMPMNEKAMADR
GQSGPKPILPYSSMFIFGQTNPVRRLCHYIVTLRYFEMSILVVIAMSSIALAAEDPVWTN
APRNNVLKYLDYAFTGVFTFEMVIKMVDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAF
SSFMGSQQGVTRGTKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVLNI
LIVYILFMFIFAVIAVQLFKGKFFYCTDESKGLQKDCKGQFLYYDREEVAAMPREWKKYE
FHYDNVLWAFLTLFTVSTGEGWPTVLKHSVDATFEDTGPSPGYRIEMSIFYVVYFVVFPF
FFVNIFVALIIITFQEQGDKALSECSLEKNERACIDFAINAKPLTRYMPQNMQSFQYRMW
KFVVSAPFEYSIMIMIALNTVVLMMKFHGAPDFYEAMLKNLNIVFTTLFSLECILKIIAF
GPLNYLKDAWNVFDFVTVLGSITDILVTEINTTDRLLNLSFLRLFRAARLIKLLRQGYTI
RILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIEMNEDTAINHHNNFRTFLQAL
MLLFRSATGEAWHEIMLSCLSHRACDKLSGSDGEECGSDFAYFYFVSFIFLCSFLMLNLF
VAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRIKYLDMYQMLLHMSPPLGLG
KKCPPRVAYKRLVKMNMPIADDNSVHFTSTLMALIRTALGIKLASGMVAQRISDYELKKE
LSTVWPSLSQKTMDLLVTPHKHNELTVGKVYAALMIFDYYKQNRARRLQLQQQQQGTSGS
QCKVGALFKPLLPLTHMQEKDLPMMLNSVEPPSMLQPQPKSHAKSQPQTRPSFNSLNNGG
TLQGHDHNIKPSSSWVMEKPKEAPRAKTKRTMSRGPSEDTPDTAIIQESVEMSEIETSAS
STIPVPGSGLENQGRAASMPRLNAELQRSHSRHSPGIHLASVPDASPMKRSASTAAPQRP
QEVNLRDYTLEKPSQDRPHHHHHHHRCHHRRDRDRDKDREKRQRSLDAPLSGQPPSAAGA
TEDPDPAASRERVHDRGRSHDRKQHSSADKQRYYSCDRYCSREHCHTKSATASCAASPSD
GQETSSKQGSGWVKGSPVVLSSSSSTPSRGRRQLPKTPHTPRPGVAYKTANSSPVHFVSS
LASLSPGRLCRGQSEHNTLRHSSSHHFPCPVTRISSEPFLGQGQGHNVALGRLYGSLRDQ
LDVFQDAVSRSPSPCAGHSSRTPLPRMMGALLPAPQQNLGVPNGYHFSFGGRASPGSGVR
APRYYQEAEEDEWC
NT seq
7245 nt
NT seq
+upstream
nt +downstream
nt
atggctcgatttgatgacgaactgtctagccgctatggaggcatgtgccccgcgggcccg
gccaggggggccagccggctgccggggcctccgggggtccagaggatgtacaagcagacg
atggcccagagagccaggaccatggctatttacaaccccattccagtcaaacacagctgc
ctctccgttaaccgctctctgttcatcttcagtgaggataatatcatacggaaatatgcc
aaaaagatcacggaatggcctccatttgagtacatgatcctggccaccattattgcaaac
tgcattgtgctggccttggagcaacacctaccggcgtcagacaaaacaccaatgtcagag
cgtttggacgacacagagccctattttatcggaatattttgttttgaggctggcatcaag
atcatcgccctgggctttgcctttcacaaaggaacctatctacgtaatggctggaatgta
atggactttgtggtggtcctaacagggatcttggccactgtgggggcggattttgatcta
agaacactgagggcggtgagagtactgcggccgctcaaactggtctctggcattccaagt
cttcaggtggtattgaagtccattatgaaagccatggtacctctgctgcagattggcttg
ctgctcttcttcgccatcctcatgtttgccatcatcggcctcgacttctacatgggcaag
ttccatcgcacctgcttcagaatagacacagacgagcaagctgcagatttcccctgtggc
ctggaggctccggcgaggacatgtgccaacggcaccgcctgcagggagtactggatcgga
cccaactatggcatcaccaactttgacaatatcctcttcgctgttctcacagttttccag
tgcatcactatggagggatgggtggacattctctataacgccaacgatgcctcagggaac
acgtggaactggctttatttcatccccctcatcatcatcggttccttcttcatgctcaac
ctggtgttaggtgtgctgtcaggggagtttgccaaggagcgagaacgggtggagaagagg
caagaattcctgaagctccgcagacaacagcaaatagagagagagttaactgggtacctg
gagtggatttgcaaagcggaggaggtgatgctggccgaagaagataagaacgcagaggag
aaatctctggatggagcgtggtacaaaagaaaaaacaacaactctgtgatgaaaaggacc
aagaaaagtaagaatgacctcatcaatgcagaggaaggcgaagaccacttcactgacatc
tcatctgctgggtcgccgttcacccgggccagcttgaaaagcaagaacgagaattcatct
tacttcaagaggaaagagaaaagaattcgcttcaccatccgccgtctggtcaagtcccag
agcttctactggactgttttgtgtttggttggcctcaacacgttgtgtgtagccatagta
cactatgaccagcctgaatggctcacctttgcattatacctggccgagtttgtattcttg
ggcctgtttctggcagagatgtccatgaaaatgtatggcctcggaccccagaactacttc
cactcctcattcaactgttttgactttggggtgattattggcagtatttttgaagttatc
tgggctgccatcaaacccggggcgtcatttgggatcagtgtcctgcgggctctgagactg
ctcaggatcttcaaagtcaccaagtactggaactccttgaggaacctggtcgtatccctt
ctcaactccatgaagtctattatcagcttgttgttcctcctcttcctcttcatcgtggtc
tttgctctgttgggcatgcagctgtttggtggccaatttaattttgaagatgaaacgcca
acaaccaactttgacacattcccagcagcgattctcactgtcttccagatcctaactggg
gaggactggaacgcagtcatgtaccatgggatcgaatcacaggggggtgttcacaggggg
atgttctcctccatttatttcattgttctcactctctttggaaactacacactcctcaat
gtgttcttggccattgctgtcgataacctcgcaaatgcccaggagctcactaaggatgaa
gaggagcaagaggtggccatcaataagaagcttgcactccagaaggccatggaggtaaag
gaggtcagccccatgtcagccactaacatgtccatcacagcttttctaacacgcagtcga
ggtaacgcacactctagcagctcatccatctgcagcgttaactcactctcctctgtgatc
acaccttctggtagagctgcgagttatgtctgcaccccagtccactatctgagtaaggag
cagcagaagtcaatgaagacaatgtcggtgtgggagcagagggccaaccagctgaggagg
cagaaccaggcgagctgtgaggccctctacagtgagctggatcttgaggagcgtcttcgc
ctgtcctcggccctgaacatccggcctgacatgaagacccacctcgaccggccgctagtt
gttgagcctcgcgacgggcctttgctggccggccaccaacaccaccatcacaagccttcc
atgccggaggaggcagaaactaccactgaccctcctcctcctgtgcctcaccaggcccgt
cgccaccaccgccacagagacagggaccgggccagaacaaaagaggggacaaatgaaaac
agtggcactagtaaggacgggggccaccatgtccatcacagccgctccaaagaccacgac
agcagccggggcaaagaaggaaagagcgagaggtcccgaagccaagaaggaggcaggaga
catcaccatcagagctcagtggatgacagcggaggtggaggagccatgagcgagagagag
catcgacatcatcattcacaccggcagtcccgagggggcaatgggacagtgaacagtggc
gggaggggagagcgacgatcccgccataaaaatggacgttcgtctaacagggatggggat
aggaattccagaggagacagtggtgccaatggagaacggaggagacatcggcctcatgga
tcaaggggccaatccacagttgaagtagaggtgtccaacgagagagagacgggtcacaga
tttggcgactcagagggtgaggtcctcgccatctccaagcagggctctgaaggggtcaac
tgtcctcctgaccgaccagaggactcagacaaccagaggaacattacaagaactggtcaa
acctccatccacattcctcctgtgactatcacttccccacctggagacaccaccctcatg
caaattaacagtattgactgtgagacaatgcccatgaatgagaaggccatggcggatcga
ggtcaaagtggacccaaacccattctgccttacagttctatgttcatcttcggacagact
aatccggtgaggcggttatgtcattacattgtgactctgcgttattttgagatgtccatc
ctggttgtcatcgctatgagcagtattgctttggcagcagaggaccctgtctggacgaac
gcccctcgcaacaatgtgctcaaatatctggattatgccttcactggtgttttcactttt
gaaatggtgatcaagatggtggaccttggcctgttgcttcatcctggagcctacttcaga
gacctgtggaacattctggacttcatagtggtcagtggggcgctggtggcttttgcattt
tcgagcttcatgggatcgcaacaaggtgtgaccagggggaccaaaggcaaagacatcagc
actatcaagtcactgagagttctccgagtgctcaggcctctcaagaccatcaaacgtctg
ccaaaactcaaggcggtgttcgactgcgtggtcaattctttgaagaatgtgctgaacatc
ctcattgtttacatcctcttcatgttcatctttgctgtcatcgcagttcagctcttcaag
ggaaaattcttctactgcacagatgagtctaagggcctacagaaggactgcaaaggacag
tttctctactatgacagggaagaggtggctgccatgcccagagagtggaagaaatatgag
ttccattacgacaatgtgctttgggccttcctgacccttttcactgtctccactggggag
ggctggccaactgttttgaagcactctgtggatgctacctttgaagacacaggtcctagt
ccaggctaccggatagaaatgtccatcttctatgtggtctactttgtggtcttccctttc
ttttttgtcaacatctttgtggctctgatcatcatcaccttccaggagcagggagacaag
gcattgtctgaatgcagcttggaaaagaatgagagggcttgtattgactttgccataaac
gccaaacctctgacacgctacatgccccagaacatgcagtccttccagtacaggatgtgg
aagtttgtggtttcagctccctttgagtactccatcatgatcatgattgctctcaatact
gtggtactcatgatgaagtttcatggtgctccagacttttatgaagcgatgctgaagaac
ctcaacatagtcttcaccactctcttctctctggagtgtatcctcaagatcattgctttt
ggtccattgaactacttaaaggatgcttggaacgtgtttgactttgtcacagtgttgggc
agcatcactgacatcctggtgactgaaatcaatactacggacaggctgctgaacctgagc
ttcctgaggctgttcagagccgctcggctcatcaagctgctgagacagggctacaccatc
cgcatcctgctgtggaccttcgtccagtcctttaaggccctgccttatgtttgcctcctg
attgctatgctgttcttcatttatgccatcattgggatgcaggtgtttggcaacattgag
atgaatgaggacacagctatcaatcaccacaacaacttccgcactttccttcaagctctc
atgctgctgttcaggagtgcaactggggaggcctggcacgagatcatgttatcatgttta
agtcaccgagcctgtgacaagctatcagggtccgatggggaagagtgcggcagtgatttt
gcgtacttctactttgtctcctttatcttcctttgctccttcctgatgctgaacctgttt
gtggctgtcataatggataactttgagtacctaaccagagactcctccatcctggggcct
catcacctcgatgagttcatccgggtttgggctgagtacgaccccgctgcatgtggccgt
atcaagtacctcgatatgtatcagatgctgctccacatgtccccacccttaggtttggga
aagaaatgtccgccaagagtcgcttacaagcgcctcgtcaaaatgaacatgcccatcgct
gatgacaacagcgtccatttcacctccactctgatggccctgattcgcactgccctgggg
atcaaactggcctcaggcatggtagctcagcgaatatctgactatgagttaaagaaggag
ctgtcgacagtgtggcccagcctctctcaaaagaccatggatctgttggtgacgccacat
aaacacaatgaactgacggtagggaaggtttatgcggccctgatgatcttcgactactat
aagcagaatcgagcaaggaggctgcagctgcagcagcagcaacagggcacatcaggctcc
cagtgcaaggtcggggctctatttaagccattgctgcctctgactcacatgcaggagaaa
gatctgcctatgatgttaaacagtgtggagcctcccagcatgcttcagccccagcccaaa
tcccatgccaagtcccagccacagaccagacctagcttcaactccctcaacaatggaggc
acactgcaaggccatgatcacaacatcaagccatcatcatcttgggtgatggagaaaccc
aaggaagcaccccgagctaagaccaagagaaccatgtccaggggcccatctgaagacaca
ccagacactgccatcattcaggagtcggtggagatgagcgagatagaaaccagtgccagc
agtacaatcccagtccctggctcaggtctggagaaccagggcagagctgcctctatgcct
cgactcaatgctgagctgcagcggagccactcacgccactctccagggatccatctagct
tctgtccctgatgccagtcctatgaagcgctccgcgtccactgcggccccacagcggccc
caggaggtcaacctgcgggactacaccctggagaaacccagccaggaccgaccccaccac
catcaccatcaccaccgctgtcaccatcgtagagacagggacagagataaagacagagag
aagaggcagaggtctttggatgcacctctgagtggacaaccacctagcgcggctggtgca
acagaagatccagacccagctgcctccagagagcgagtccacgaccgtggacgctcccac
gacagaaaacaacactcctcggcggacaagcagcgctactactcctgcgaccgctactgc
agtcgggaacactgccacaccaaatctgccaccgccagctgtgccgcctcccccagtgac
gggcaggaaaccagcagcaagcagggcagtggttgggttaaaggaagcccagtggtattg
agctccagttctagcacaccaagccgcggacgtcggcagctccccaagaccccccacacc
cctcggcccggggtggcctacaagactgccaattcatctcctgtgcactttgtgtccagc
ctggcctctctgagtcccggccgactatgccgcggccagtcggagcacaataccctccgg
cacagcagctcccaccactttccctgccccgttactcgtatcagctccgagcctttcctg
ggccagggccagggccacaatgtggccctgggcagactctacggaagcctccgggaccag
ctggacgtctttcaggatgcggtgtcacggtcgcccagcccctgtgctgggcactcatct
cggaccccactgcctcggatgatgggagccctgctacctgctccacagcagaaccttggg
gtgcccaacgggtaccacttcagctttgggggcagagccagcccaggctctggcgtcagg
gcacccaggtattaccaggaggcagaggaggacgaatggtgctag
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