Etheostoma spectabile (orangethroat darter): 116689199
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Entry
116689199 CDS
T08457
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
116689199 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116689199 (dmxl1)
Membrane trafficking [BR:
esp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116689199 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
116689199 (dmxl1)
RAVE complex
116689199 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_CAF1B_HIR1
PEP5_VPS11_N
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_WDR19_2nd
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
116689199
NCBI-ProteinID:
XP_032371501
LinkDB
All DBs
Position
5:21965224..22029411
Genome browser
AA seq
3121 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNDVPFTAYASGCDVVILGSNFERLQIIPGAKHGNIQV
GCVDCSLQGGQIAASYGSIVCVFEPVQHPDQKDTSLSNCQWQKTGQFVLKSMVRNLAWHP
TGSTLLTGSSSLQLWSNVDGVKDEAEEVEKQTEVTLRDSHSAWSCIWQSKTASSVSLMKF
SPDGEFFATAGQDDCLVKVWYSTSKWKSGVFKLFTPPEQSVSFQGELAFSFVYLAHPRSV
TGFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLLSTYHNNHTGQHSDTPR
CAGPSGKNACNGKLQGRTAQEVSYSNSNLREALDASFYRDAPQPSLTGCLPHHQSQHYNH
KRSSSSMPHANALCHFHIAASINPATDIPLLPSISSLSAVDDEEPGGPFTVHWLNNKELH
FTLTMEVFLQQLRGSLEQENKCSNEEPEDEDNFNEEDKCSRPSNSQVPEAVELPLAAVKH
QVDGLLEEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFPTG
DAISLSHSVVMYACNKNVDLAIQHGRQRPPGNTLPHTKTALISYGGQGKALPSSSLRLSI
FTPNVLMISKHADGSLNQWAVGFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLL
LTTSHHNALWTPEADSILAPPDTYSSGFSHPTSLPQGSRPSRGSLGVVSQDPNAIYSELI
LWRVDPVGPLSLSGGVAELARINSLNSSAFANVAWLPTLIPSSCLGAYCNSPSACFVASD
GHSLRLYQAVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDSITDFQGKQ
TQLLHVFEEDLILGSENRTESTQATPDFLHTASSKAAFSARFFLVVVELTPTGRSILHMW
HLHLAAQPITMEETTMENDATTASPMNSSTLSFDTFRSPITQKSKPCTSNLQSACRLSLT
TQRLYSQEMALPEGVEAISVTPSAGHLSASCSLPADRVPYLLATSCSDRKVRFWRCNVTA
LEPSIMDNVVYQWEEWPMLVEERLPNSSEVRVQGRPIEVSCCHSGRIAVAYRQMPNTHLS
STPYLNSHELLTSPLTLSSLPYVQSNTHQTPTLTVQRSPNLTPSPIPANSREPVVHIDIF
QCESTGGSQWILEQTIVLDSADPTTGSANIPGNLDLPMPNEEDCPGSISKSQVHLDWVSQ
EDGSHILTVGIGTKIYMYGRLSGKPPELCLTSDATRDQSLSRLVLLRSVDLVSSVEGSLP
IPVSLSWVRDGILVVGMDCEMHVYSQWQPPAPSKPNPVIAQDTDISSSVSSIISAVRQSQ
EEGLSSGTTMSSLAPPKKALTRSMMSLAQKLSGKRTAYDLPVEMEDSGLFEAAHQLFPTL
PQYHPVHLLELMDLGKVHRAKAILSHLVKCIAGEIVALKDSTTNPEKRVRSRTISAGGST
ARDRKLFCKAENSTPDYTEISSIPPLPLYALLAADEDTSPKPDKVGSVSGDSGHGSSHTD
VYDELFHTPSIADLDPLEDNQEETGNKVIDLSQYSPTFFGPEHAQVLSSHLLHSSLPGLT
RMEQMSLMALADTIATTSTDLKDSQGKSKGGETLDECGLKFLLAVRLHTFLSTSLPPAHR
AQLLRQGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWLRSTNKLRRC
IEKVAKTSLQRNNDPLDAAIFYLAMKKKAVVWGLYRSQNNAKMTEFFRNNFNEDRWRKAA
LKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEFEMASTY
KKILQRHVLGQDKQIQAHQDPFLRSMAHWVLEDYSRALDTLLEQPANSTSSGSTESKCNA
GSSSVSACNPEVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTAEGRRADSISLEERKLFFT
AAYAHLQAGCPMLALEVLSKMPKVRKHSKLPNQEYTGTAAELSVGSKNGQTLEPDWSQPA
LNGYESDANSLSNSRSDSVLSFDWSQPSLMRADESLELKWDVDKADEEEEEEEEDEDEDE
EENKNVKSGRSVDSSSVFQDTQDAISPLMETVTREDCNDFLDPSNDTLAAQLKFTACLKI
MTNELRTLSTGYEVDGGKLRCQLYQWLEREVVALQRCCSYKPFFPELSAQGEAPVPGLVE
EEQPGSPRGDSQRSRRHWLQSNQPLLRMFLSYCSLHGSHGGGLASVRMELILLLQESHQD
DTIQSAVTPCQPTIPLLMACTANVKTVVANPIVYLTNMAHDILQTINSLDSPPHPDVVNN
EIYVMHTLAASLSACIYQCLCDGHTHSHVNHFTGIVYQSVLLSQKLPVRTVSMDESVQPN
TSPAQWPGIASLIRLLSSAGEESQPGLTVLLCEILTAVFLSLFVHGMATHSSNELFRIVA
HPLNSKLWVTVFGGGARSPVIEKPNSPTRTPPPASPSGSERKSRRFRLLSSRSGSKEESG
IERGCPSSSKDDPVVEHEATSIFKERFVPPELSVWDYFITKPSLPPSENRIEYDSEESQG
SQDEEEDDGQYEDVFDPSSPQREHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMAGYDLLD
LPVGSPLCHAVLKTLQRWEQLLQKRLEIFGGPPSKYISNPLQEETAAPGPALLRHKALFE
PSNTPFRTSHHSALPEKRLWQFLVKQEEVQETFIRNIFTKKRDTNELGEDQTDNVKCSGM
EETGNYQTETDLGSPGGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVSSILA
TQILTWIDDDDAEAKGACSDDFLVVHARDDFTALHGTTPYTHSSPGTPIHMPWLGGVQTG
RGAAVVRSKPKVMIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFRSPG
NSRVTRIRFNHQGNKFGIVDADGGLSLWQTNTSGNAPKPYLTLQCHNKTANDFVFVGSSS
LIATAGLSTDNRNVCLWDTLVTPANSLVHAFCCHESGATVLLMASRQQLLITGGRKGWIS
VLELAHRHQRQSFQAHDSPVKALAVDPTEDCFISGSAEGNIKIWSLATQCLLYTFPNEHA
RQSMFRNLGTGVMQIEVGPSNHIFSCGADGTMKMRCLPNRFSVANNNNNHGNLKIDVKFI
V
NT seq
9366 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaggtcctcacaggggctgtcaaccctggagacaattgtttctctgta
gggagcgtcaacgatgtgccattcacggcctatgcgtcaggttgtgatgttgtgattttg
ggcagtaactttgagcgactgcagatcatcccaggggccaaacatggtaacatccaggtt
ggctgtgttgactgctcactgcagggtggacagattgcagcttcctatggaagcattgtg
tgtgtctttgagcctgttcaacacccagatcaaaaagacacatcactgtctaactgccaa
tggcagaagactggtcaatttgtattaaagtctatggtacggaacctggcctggcacccc
acaggcagcactttgttaacaggctctagtagcctccagttgtggtctaatgttgatgga
gtgaaagatgaagctgaagaagtggaaaagcagacagaagttaccctaagagactctcat
tctgcctggagctgtatctggcaaagcaagacggcctcttcagtcagtttaatgaagttc
tctcctgatggggaattctttgctactgctggacaggatgactgcctagtaaaggtctgg
tacagcactagtaagtggaagtcaggtgttttcaaactcttcacacctccagaacaaagt
gtcagtttccagggagagctggccttttcatttgtatacctggcacatccccgttctgta
actggtttctcttggaggaagaccagcaagtacatgccacgaggtgcagtctgtaatgtt
ctgctcacctgctgtaaggacagcgtgtgtcggctctgggcagagacgcttttgccgggt
gacagccttctgtccacttaccataacaaccacactggccagcacagtgatacacccagg
tgtgctggtccttctggcaaaaatgcctgcaatgggaagttgcaaggaagaacagcacag
gaagtaagctactcaaattcgaatcttcgagaagcattggatgcctccttttatcgtgat
gcgccccagccctctctgactggctgcctgcctcaccatcagagccaacactataatcat
aagaggagcagcagcagcatgcctcatgccaacgctctctgccatttccatattgctgca
agcatcaaccctgccaccgacattcctctgttgccctccatctcctctctgagtgccgtg
gatgatgaggaacctggaggaccttttactgtccactggctcaacaacaaagagcttcat
ttcactttaactatggaagtcttcctgcagcagcttagaggcagcctggagcaagagaac
aaatgctctaatgaagagccagaagatgaggataactttaatgaagaagacaaatgtagc
aggccaagtaactcccaagtacctgaggctgtggagcttcctctggcagcagtgaagcac
caggtggacgggctgttagaggagtggaataaaggggcagacatgttgttcagtatccat
cccatggacggctctctgttagtctggcatgtagactggttagatgaataccagcctggc
atgttcagacaagctcaggtgtcgtttgtgtcccgtatcccagtagcgttccctacaggt
gatgcaatctccttgagccacagtgtggttatgtatgcctgcaacaagaatgtggatctg
gctatccaacatggccgacagcgaccacctgggaacacattgcctcataccaaaactgct
cttataagctacggaggtcaaggaaaagctttacccagcagtagtcttcgactaagcatt
tttacccccaacgtccttatgatctccaaacacgctgatggctccttgaaccagtgggca
gtcggcttcgcagaggactctgctttctccaccgttcttagcgtctctcacaagtcacgg
tactgtggccaccgcttccaccttaatgacctggcctgtcactcattactccctctcctc
ctcaccacttcacaccacaacgccctgtggacgcctgaggcagacagcattctggctcct
ccggacacatactcctctggtttctctcatccaacgtctctgcctcaagggtcacggcct
agccgggggtccctgggtgtagtttcccaggatcccaatgcgatctacagtgagctgatt
ttatggagagtggaccctgtcggcccactttctttgtcaggcggggttgccgagctagct
cgaatcaattctctcaattcatcagcgtttgcaaatgtagcctggctgcccacactcatt
cctagcagctgtttaggtgcttactgtaattctcccagcgcctgcttcgtggcaagtgac
ggccactcactcaggctatatcaggctgtcattgaagctaagaaactcctgagtgagctc
tccaatcctgagatatcaaaatatgttggcgaggtgttcaacatcatcagtcagcaatcc
acagcaaaaccagggtgtattatagagttggattccatcactgactttcaggggaagcag
acccaactcctacatgtttttgaggaggatctgatcctcggcagtgagaacagaacagaa
agcacacaggcaactccagattttcttcacacagcctcaagcaaggcggctttctcggca
cggtttttccttgtggtggtcgaattgaccccaacaggtcgctcgatcctccacatgtgg
catctccatcttgctgctcaacctatcaccatggaagaaaccacgatggagaacgatgcc
acaacagcttctcctatgaacagctctactttgagctttgacacgttcagatctccaata
actcagaagagtaaaccctgcacttccaatctgcagagtgcctgtcgcctcagcctcaca
acacaaaggctatacagccaagaaatggctctgccggaaggagtggaagccatcagtgtt
acaccatcagcaggtcacctgagtgcgtcatgttctctgccagctgatcgtgtgccttac
ctccttgctacttcctgttctgatagaaaggttcggttctggaggtgcaatgtcacggcg
ttagagccatccattatggacaacgtggtgtaccagtgggaggagtggcctatgctggtg
gaggagagacttcccaacagcagtgaagtaagagtgcaaggtcgtcctatagaggtcagc
tgctgtcactctggacggattgcagttgcttacaggcaaatgccaaacacacatctgagc
tcgacaccctatctgaactctcacgaactgttgacttctcctcttactttgtcttccctc
ccatatgtgcagtccaacacccaccagaccccaaccctaactgtacagcgtagcccaaat
ctcactcccagtcccatcccagccaacagtagagagccagtggtccacattgacatcttc
cagtgtgagtccactggtggatctcagtggattctagagcagactattgttctggacagc
gcagatcccacaactggaagtgccaacattcctggtaacttggacttgccaatgcctaac
gaggaggactgtcctggttctattagtaagagccaggttcatttggactgggtctcccaa
gaagatgggtcacatattctcactgttggtattgggacaaagatttatatgtacggccgt
ctgtctgggaagcctccagaactctgtttaacatcagatgccactagagaccagagcttg
tctcgcctggttctgcttcgatccgttgatcttgtctcctctgttgaaggatcattgcct
attccagtctccctctcgtgggtaagagatggcatcttggtagtaggcatggactgtgag
atgcacgtctactcccagtggcaacccccagcaccatccaaacccaatcctgtgattgcc
caagacacagacatcagcagcagtgtctcctccataatctcagccgtcagacagagtcag
gaggaagggctcagctctgggacaaccatgtcttcactggcccctcccaaaaaggccctg
acaagatcgatgatgagcctggcacagaaacttagtgggaagagaacagcatatgacctg
cctgtagagatggaagattctgggctttttgaagcagctcaccaactctttcccactctg
ccccagtaccaccctgtacatttattggagctcatggatctagggaaggttcaccgtgcc
aaagccatcctctcccacctggtgaagtgcattgctggagaaattgttgcacttaaagac
agtaccaccaatcctgagaaacgtgtacgttctcgaaccatcagcgccggaggcagcaca
gccagggatcggaagctgttctgcaaagcagagaactccacccctgactacacagagata
agctccatccctcccttgcctctgtacgcccttcttgcagctgatgaggatacatcacca
aaacctgataaagtgggcagtgtgagtggagatagtgggcatggttccagtcacactgat
gtttatgacgagctgtttcatacacccagcattgcagacctggaccctctggaagacaat
caagaggaaactgggaacaaggtaattgacctgtcccagtacagtccgacattctttggt
ccagagcatgcccaggttctgtccagtcatcttcttcattccagtttgccaggcttaacc
cgtatggagcagatgtcccttatggcactggccgacaccatcgctaccacaagcacagac
ctcaaggacagccaaggcaaaagcaaaggtggcgagacactggatgagtgtggtctaaag
ttcttgcttgccgtcagactccacaccttcctctctacctccctgcctccagcacatcga
gcacagctactacggcaaggcctgtcaacatgtcattatgcctgggccttccactctgag
gctgaggaggagctgctgaacatgctgcctgccctacagaagggagagcccacctggcct
gagctgcgctcaatgggtgttggctggtggctgcgcagcaccaacaagctacgcaggtgt
attgagaaggttgccaagacttctttacagagaaacaatgatcctctggatgcagccata
ttttatcttgcaatgaaaaagaaggcagtggtctggggattgtacaggtctcagaacaat
gctaaaatgacagagtttttccgcaacaacttcaatgaggaccgttggaggaaagcagca
ctgaaaaatgcgttttctctgttgggaaagcagcggttccagcattctgcagcctttttc
cttctagccggctcccttaaggatgctgtggaggtgtgtttagagaaaatgcaggaccta
cagcttgccttggtgatctctagattgtatgagtctgagtttgagatggcatccacctac
aaaaagatcctccagagacatgttctgggacaagacaaacagattcaagcccaccaagac
cccttcctgcggagcatggctcactgggtcctggaggactacagcagagctttggacact
ctacttgagcaacctgctaacagcaccagctctgggtccactgagagcaaatgcaacgct
ggttcctcttctgtgtctgcatgtaatcctgaggttttcaacttttacacctatcttcgt
acccacccactcctccttcgccgccattttggctcttcagacaaggctaaagttggactg
accgctgagggtcgcagggctgactccattagtctggaggagaggaagttgtttttcaca
gctgcatatgcacacctgcaagctggctgccccatgctagcacttgaagtcctctccaag
atgcccaaagtccgcaagcattctaaactccccaaccaggagtatacaggcaccgctgcc
gaactcagtgttggtagcaagaatggacaaacgttggagccggattggtctcagccggct
ctaaatggctacgagtcagacgcaaacagcttatctaacagccggtccgattcagtgtta
agttttgactggagccagccttcattgatgcgtgcagatgaatccctggagctgaagtgg
gatgttgacaaagctgatgaagaagaagaagaagaagaagaagatgaggatgaggatgaa
gaagaaaataaaaatgttaagagcggtagaagtgttgatagcagcagtgtgttccaggac
acacaggatgccatctcgccattaatggagacagtgacaagagaagactgcaatgacttc
ctggatccatctaatgacaccttggcggcccagctcaagtttactgcctgcttgaagatt
atgaccaatgagctccggacgctgtcgacggggtatgaagtggatggagggaagctacgt
tgccagctctaccagtggttggaaagagaggtggtggctctccagcgttgctgcagctac
aagcccttctttccagagctgtctgcccagggtgaagcccctgttcctgggttggtggag
gaggaacagccagggagtcctcgtggtgacagccagaggagtaggagacactggctgcag
agtaaccagcccttactgaggatgtttctgagctactgcagcttgcatggctcccacggt
ggaggactggcctcagtgcgcatggagctcatattattgcttcaagagtctcaccaggat
gacaccatccagtcagcagtgacgccatgtcaaccaactatccctcttctgatggcttgc
acggccaacgtaaagacagtggtggccaatcctattgtctacctgaccaacatggctcat
gacatcttgcagaccatcaattcactcgactctcctccacatcccgatgttgttaacaat
gagatctatgtgatgcacacattggctgcctctctgtcagcctgtatatatcagtgtctg
tgtgatggacacacccacagccatgtgaaccatttcacaggaatcgtgtatcagagtgtt
ttgctgtctcagaagctgccagtcagaactgtcagcatggatgagtctgttcagcccaac
acttctcctgcacagtggccaggtatagcctctctgattcgcctgttgagctcagcaggc
gaggagagccagccaggcttaactgtgctgctctgtgagatcctgactgctgtcttcctc
agtctgtttgttcacggcatggccactcactctagcaatgaactgttccgcattgtggcc
caccccctcaacagcaagctttgggtgacagtatttggaggaggcgcccggagccctgtc
atagagaaaccaaacagcccaacaagaacacccccaccagcctcaccaagtggctcagaa
aggaagtctaggcgattcaggcttctgtcatcacgcagtggatccaaggaagagtctgga
atagagcgggggtgcccatccagttccaaggatgaccctgtagtagaacatgaagctacc
tccatctttaaagaacgatttgtccctccagagctcagcgtttgggattactttatcacc
aagccttcactgccaccatcagaaaacagaattgaatatgactcagaggagagccagggc
agtcaagatgaagaagaagatgatggtcaatatgaagatgtgtttgaccccagctctccg
caaagagagcattcaaaccacaattcatacagttggtgtttgatgcgtctggcaatggtt
caactggtgttggtcaacctcaagtccttttacccaatggcaggatatgatttattagat
ctgcctgtgggctctcctctgtgtcacgctgtgctgaagacactgcagcgctgggagcag
ctgctgcagaaaaggctagagattttcggggggcccccttccaagtacatctccaacccc
ctccaggaagaaaccgccgcaccgggccccgccctgctcagacacaaggctctgtttgaa
ccatccaacaccccgttcaggactagtcaccattcagcactgccggagaagcgtctgtgg
cagtttttggtcaagcaggaagaagttcaggagactttcattagaaacatctttaccaag
aaacgggacacaaatgagttgggtgaggaccagactgacaatgtgaaatgttcagggatg
gaggagacaggaaactatcagactgagacggatctgggctccccgggaggaaaggcacgc
atcatccacaaggaatctgacatcatcacagcctttgccatcaacaaggcaaatcgtaat
tgtttagtcatggcctccacccatgacattcaggagttggatgtgtcatccatcttggcc
acacaaatcttgacatggattgatgatgatgatgcggaagccaaaggtgcttgtagtgat
gacttcctggtggttcacgcacgtgatgactttaccgccctccacggcaccacaccgtac
actcacagtagccccggcacacccatccacatgccgtggctgggaggagtgcagacaggc
cggggtgcagctgtggtgagatctaaacctaaagttatgatcaagagaaatattaacaat
gtgagaagaatgacctcccatcccacactgccttactacctgacaggagctcaggatggt
agtgtcaggatgtttgagtggggccactcccagcagatcatctgcttcagaagtccaggc
aactccagagtcaccaggatacgattcaaccaccagggaaacaagttcggtatcgtcgat
gctgatggaggtttgagtctctggcagaccaacacaagtgggaatgcacctaaaccatac
ctaacgttgcagtgccacaacaagacagctaatgactttgtctttgtgggctcctcctcc
ctcatcgccactgcaggtctttcaacagacaacaggaatgtgtgtctatgggacactctg
gtgactcccgcgaacagccttgtgcatgctttctgctgccatgaatccggagctacggtg
ctcttgatggcctccaggcagcagctgcttatcaccggtgggaggaagggctggattagt
gtcctggagctcgcccacaggcaccagcgtcagagcttccaggcccacgactcgccggtc
aaagctctggctgtcgatccgactgaggactgctttatcagtggctcagctgagggcaac
atcaagatctggagcctggccacgcagtgtctgctctacacctttcccaacgaacacgct
cgccagtccatgttcaggaacctcggcacgggtgtcatgcagatcgaggtgggaccgtcc
aatcacattttctcctgcggcgccgacggaaccatgaagatgaggtgcctccccaaccgc
ttcagtgttgccaataacaacaacaaccatggcaacctcaagattgatgtcaagttcatc
gtatag
DBGET
integrated database retrieval system
