Etheostoma spectabile (orangethroat darter): 116689218
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Entry
116689218 CDS
T08457
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 2 isoform X1
KO
K04646
clathrin heavy chain
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04142
Lysosome
esp04144
Endocytosis
esp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116689218 (cltcl1)
04142 Lysosome
116689218 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116689218 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116689218 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116689218 (cltcl1)
Membrane trafficking [BR:
esp04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116689218 (cltcl1)
Exosome [BR:
esp04147
]
Exosomal proteins
Proteins found in most exosomes
116689218 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
LVIVD
Motif
Other DBs
NCBI-GeneID:
116689218
NCBI-ProteinID:
XP_032371540
LinkDB
All DBs
Position
5:complement(20714828..20744781)
Genome browser
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNMGVNPANIGFSYLTLESDKFICIREKVGDQNQVVIVDMSDPTN
PIRRPISADSAIMNPASKVIALKDAAKTLQIFNIEMKSKVKAHTMTEEVMFWKWISVNTV
ALVTDTAVFHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVG
AMQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKPSTLFCFAVRSQAGGKLHIIEVGQPAAG
NQPFAKKAVDVFFPPEAQTDFPVAMQIGNKHGVIYLITKYGYIHLYDLESGVCIYMNRIS
AETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAG
AEEIFARKFNTLFAQGSYSESAKIAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFG
ILLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVY
LRANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVSPDQGLQFAQMLVQD
EEPLANINQIVDVFMEGNLIQQCTSFLLDALKNNRPAEGHLHTRLLEMNLIHAPQVADAI
LGNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLS
VEDSLECLRAMLSANIRQNLQLCVQIASKYHEQLGTEALVELFESFKSYEGLFYFLGSIV
NFSQELDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCD
RFDFVHDLVLYLYRNSLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQ
FSTDELVEEVEKRNRLKLLLPWLESRIHDGCEEPATHNALAKIYIDSNNTPERFLKENTF
YESAVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANV
LEENNPFRRQLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFS
EHRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNT
SAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYME
VVNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQ
QVGDRCYDEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFA
CVDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELITLLEAALGLERAHMGMFTE
LAILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEFDNAAITMM
SHPTDAWKEGLFKDIIAKVANVELYYKCLSFYLEYKPLFLNDLLTILSPRLDHSRAVTFF
SKVNQLKLIKPYLRSVQNHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRL
EKHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYVAESKDAELAETLLQWFLE
EGRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEFAAKVTV
DKLEEADSQRKTEEEVTEPQPIVFGQQLMLPASPAPVAPQPAYPGYGYPAAPVGFPAQPV
YGFNM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacatctgcagttgcagaacatgggcgtg
aacccagccaacattgggttcagctatctgaccctggagtcggacaagttcatctgcatc
agagagaaggtgggcgatcagaaccaggtggtgattgtggatatgtctgaccccaccaac
ccaatcaggagaccgatctctgccgacagtgccatcatgaatcccgccagcaaggtcatt
gccctgaaagacgctgccaagacgctgcagatcttcaacattgagatgaagagtaaggtg
aaggctcacactatgacagaggaggtcatgttctggaagtggatatcggtaaacactgtt
gccctggtgacagatacagctgtctttcactggagcatggagggggattcccaacccaca
aaagtgtttgatcggcacgctagtctggcgggatgtcagatcatcaactacagaactgac
gaacaacagaagtggctactgttgatagggatttctgcacagcaaaaccgtgtggttggg
gcgatgcagctgtattctgttgacaggaaagtgtcccagcccattgagggccacgccgct
gcctttggcgagttcaaagtggagggaaatgccaaaccctccaccctcttctgctttgct
gtgcgctcacaggctgggggaaagttgcatattattgaagttggtcagccagctgcagga
aaccagccatttgctaagaaagcagtggatgtgttcttccctccagaggctcagacagac
tttcctgtagctatgcagattggtaataagcatggtgtgatatatttgatcacaaagtat
gggtacattcacctgtatgacctggagtctggagtttgcatctacatgaaccgaatcagt
gcagagaccatctttgtaaccgcccctcatgaagccacctccggaattattggggtcaac
aagaagggacaggtgttgtcagtgtgtgttgaggaggaaaacattgtcaactatgccacc
aacgtcctgcagaaccctgatctagccttgaggatggctgtgaggtcaaaccttgctggg
gctgaggagatttttgccaggaaattcaacactctctttgcccagggaagttattcagaa
tctgcaaagattgctgcatcagcacccaagggtatcctacggacggcagaaaccatccgt
aagtttcagagtgtcccggcccagccaggtcaggcctctccactgttgcagtactttggt
attctgctggaccagggccagcttaacaagtttgagtctctggagctgtgcaggcctgtc
ctgcagcagggccgcaagcaactactggagaaatggctgaaggaggacaagctggagtgc
tcagaggagctgggagacctggtgaaggcctctgaccccaccctcgctcttagtgtgtac
ctcagagctaacgtgcccaacaaggtcatccagtgcttcgctgagactggccagttccag
aagatagtgctgtatgctaaaaaggttggctacaccccagactgggtgtttttgctgaga
aatgtaatgcgtgtcagtccagaccagggactgcagtttgcccagatgttggtccaggat
gaggagccgctggccaacatcaaccagattgtagatgtattcatggagggcaacctgatc
cagcagtgcacctccttcctgttagatgctttaaagaacaaccgcccagccgaaggacac
ttacatacacgtctgcttgagatgaacctcatacatgccccccaggtagcagatgcaatc
ctggggaaccagatgtttacacactatgaccgtgcccacgttgctcagctgtgtgagaag
gcaggtctgctgcagagagctcttgaacactacaccgacctgtatgatatcaaacgagcc
gtggtgcacacacatctgctcaaccctgagtggctggtgaacttctttggctctttatca
gtagaagactcgttggagtgtttaagggccatgttgtcggctaacatcaggcagaacctg
cagctgtgtgtccagatagcatctaagtatcatgagcagctggggactgaggcattagtg
gagctctttgaatccttcaagagttatgagggcttgttttacttcctcgggtcgattgtg
aatttcagccaggagcttgacgttcactttaagtacatccaggctgcctgcaaaacaggc
cagatcaaagaagtggagaggatatgtagagagagcaactgctatgacccagagagggtt
aaaaacttcctcaaggaggccaagctaacagaccagcttcctctcatcattgtgtgtgat
cgctttgactttgtccatgacctagtgctctacctctaccgcaacagtctacagaaatac
attgaaatatacgtacaaaaagtgaaccccagtcgtttaccggtggtgataggcggcctg
ttggatgtcgactgtgctgaggatgtcattaagaacctgatcatggtggtcagagggcag
ttttccactgatgagctggtggaggaggtagagaaaaggaataggttaaagcttctattg
ccatggctggagtcccgtatccatgatggatgtgaggagccggcaacccacaatgccctg
gccaagatctacattgatagcaacaacacacccgaacgcttcctgaaggagaacacgttc
tatgagagcgctgtggtcggaaaatactgcgagaaaagagatccccacctggcctgtgtg
gcttatgagagaggacagtgtgacctggagctcatcaaagtgtgcaatgagaactcttta
ttcaagagtgaggctcgatatcttgtgcgacggaaagatccagagctttgggcaaatgtg
ttagaagaaaacaaccctttcagaagacaactcatcgaccaggtggtgcagacagcactg
tcagagacccaggacccagaggaggtgtcagtcacagtcaaggccttcatgactgcggac
ctgcccaacgagttgattgaactgctggagaagattgtacttgataactcggtcttcagt
gaacacagaaacctccagaacctgctgattttgactgccatcaaggccgaccgcactcgt
gtgatggagtacattaacaggctagacaactacgacgctccagacatcgctaacattgcc
atcagcaatgagctctttgaagaagcgttcgccattttcaagaagtttgatgtcaacacc
tcagccatacaggtattgatagagcacatagggaacttagatcgtgcctatgagtttgcc
gagcgctgtaatgagcctgcggtgtggagccagttagccagagctcagctacaaagagac
ctggtcaaggaggccattgactcgtatatcaaagccgttgacccttcagcgtacatggag
gtggtcaacgcagccagcaagaataataactgggaagacttggttaaattccttcagatg
gctcgaaagaaagcgagagagtcttacgtggagacagagctgatctttgctttagctaaa
acaaaccgtctggctgagctggaagagtttgtcagtgggcccaacaatgctcacatacag
caggtgggcgatagatgttatgatgagggaatgtatgaagcagccaagctcttgtacaac
aatgtgtctaactttgctcgcctcgcatctacactagtccacctcggagagtaccaggcc
gctgtggacagcgccaggaaagccaacagcacacgtacatggaaagaggtgtgttttgca
tgtgtggatggcgaggagtttcgactggcacaaatctgcggccttcacatagtgatccac
gctgacgagctggaggacctgatcagctactatcaggaccgcgggtactttgaggaactc
attactctgctggaggctgcgctgggtctggagagggcccacatgggcatgttcaccgag
ctcgccatcctctactcaaagttcaagcctcagaagatgagggagcacctggagctcttc
tggtccagagtcaacatcccaaaggttcttcgtgcagcagagcagtctcatctgtgggca
gagctggttttcctctatgataaatatgaggagtttgacaacgctgccatcacaatgatg
tctcatccgacagatgcttggaaagaagggctgttcaaggacattattgccaaggttgcc
aatgtggagttatactataaatgtctttccttctacctggaatacaaacccctctttctg
aatgacttgttgaccattctgtctccgcggttggaccacagccgagctgtcacatttttc
agcaaggtgaaccagctgaagttaatcaagccttacctgaggtctgtccagaatcacaac
aacaagtccgtcaatgaagccctcaacaacctgcttacagaggaggaagactaccagggc
ctcagagcatccatcgatgcctatgacaactttgataccattggcctagcacagaggtta
gagaaacatgaactgattgagttcagacgtattgccgcctacctgtacaagggcaacaac
cgctggagacagagtgtagaactctgcaagaaggacaaactctacaaggatgcaatgctg
tacgtcgcagagtctaaggatgcagagctggcagagactctgctccagtggttcctggag
gagggcaggaaggagtgcttcgctgcctgcctgtttgcctcatatgacctgctgcaccct
gacgtggtgctggagctggcctggaggcacaacatcatggactttgccatgccatacttt
atccaggtcatgagagagtacctgacaaaggttgatgagtttgcagcgaaggtgacggtg
gacaaactggaggaggcagacagccagaggaaaactgaagaggaggtgacagagcctcag
ccgatagtgtttggccagcagctgatgttgcctgcctctcctgctccagtggctccccag
ccagcatacccaggctacggctaccccgccgcccctgtgggcttccccgctcagccagtt
tatggcttcaacatgtag
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integrated database retrieval system
