Etheostoma spectabile (orangethroat darter): 116689235
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Entry
116689235 CDS
T08457
Name
(RefSeq) thrombospondin-4-B-like
KO
K04659
thrombospondin 2/3/4/5
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04145
Phagocytosis
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04518
Integrin signaling
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116689235
04518 Integrin signaling
116689235
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
116689235
09144 Cellular community - eukaryotes
04510 Focal adhesion
116689235
09142 Cell motility
04820 Cytoskeleton in muscle cells
116689235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116689235
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116689235
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116689235
Membrane trafficking [BR:
esp04131
]
Endocytosis
Phagocytosis
Opsonins
116689235
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
116689235
Exosomal proteins of colorectal cancer cells
116689235
Exosomal proteins of bladder cancer cells
116689235
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116689235
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
cEGF
EGF_MSP1_1
Laminin_G_2
Motif
Other DBs
NCBI-GeneID:
116689235
NCBI-ProteinID:
XP_032371559
LinkDB
All DBs
Position
5:complement(9061068..9069976)
Genome browser
AA seq
948 aa
AA seq
DB search
MMGVWARAAALSLVLQQLVLTVTAQGIIYDLLVSPDCLPDLFQGSLKNKGRDEAFLLSSF
RLHSKAPTSLYSVINPKDNTKYLELSVQAKLSKVTIRFQKTDGRSVTTSFNHASLADGQD
HHVMLHARGLQGGPPRLNIYVDCRLVHTLDDLPAAFGSLPPGPNKVALRTLQSSGQDELT
DLKLVIEDTIDNVATLQDCSMDPRESLQLLSIQGGSTAHDQATMQELKSMLSEMKQLLNQ
QIKETTFLRNTIAECLACGLGGDPTNTGPAPIVMQPQSTCPPGTCFRQNMCIRSESGGFQ
CAPCPDGYTGDGVHCDDVDECQFNPCYPGVRCVNTAPGFRCEKCPLGYLGPEINGVGVSY
AKSHKQACDDIDECLGPPENGGCTANSHCHNTIGSFRCGECKTGFTGDQVKGCHGIRLCP
NGQPNPCDANANCVVERDGSISCVCGVGWAGNGYVCGKDTDIDAYPDSKLQCRDNNCEKD
NCVFVPNSGQEDADRDGMGDSCDDDADSDGIINIDDNCWLIPNVDQRNSDKDLHGDACDN
CRTVDNPTQRDTDQDGLGDECDDDMDGDGLKNILDNCQRVPNVDQKDRDNDGVGDACDSC
PDMANSNQSDSDDDLVGDSCDDNIDSDGDGHQNTKDNCPTIINSSQLDTDKDGMGDECDD
DDDNDGILDDDDNCRLVPNPDQKDTDNNRVGDACEGDFDKDNVIDTIDHCPENAEVTLTD
FRAYQTVVLDPEGDSQIDPNWVVLNQGMEIVQTMNSDPGLAVGYKAFSGVDFEGTFHVNT
MTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAAPFRAVAEPGIQLKVVKSKTGPGEYL
RNSLWHTGHTPEQVRLLWKDPRNVGWKDKVSYRWFLQHRPQVGYIRARFFEGPKLVADTG
VIIDTSMRGGRLGVFCFSQENIIWSNLKYRCNDTVPADYEDLNAQNTE
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgatgggtgtgtgggccagagcagcggctctgtctctggtgctgcaacagctggtgctc
actgtcacagctcaaggcattatctatgacctgctggtgtctccagactgcctgccagac
ttgttccaaggaagcctaaagaacaaagggcgagatgaggctttcctcctctcttccttc
aggctccacagcaaggcccctacctctctgtacagtgtcatcaaccccaaagacaacacc
aagtacctggagctcagtgtgcaggccaaactaagcaaggtgaccattcgtttccagaag
actgacggcagatcggtcacaaccagtttcaaccacgcttccctggcagatggccaagat
caccatgtgatgctacatgccagaggtctacagggcggtccgccgcgcctcaacatctat
gtagactgcagactggtacacactttggatgatctgccggctgcgtttggttcactcccc
cctggtcccaacaaggtggcactcaggaccctgcagtcgagtggacaggatgaactgaca
gacttgaaactggtgatagaggacaccatagataatgtggcgactctgcaggactgcagc
atggatccgcgtgaatctctgcagctgctgagtatccagggaggtagcactgcacacgac
caggccaccatgcaggagctgaagagcatgttatctgagatgaagcaactgctcaaccag
cagattaaggagacaacttttctgagaaataccattgcggaatgtcttgcctgtggtctc
gggggcgatccaaccaacacaggtccagctccaattgtcatgcagcctcagtctacctgc
ccacctggcacctgtttcagacaaaacatgtgcatccgctcagagtcagggggtttccag
tgtgcgccctgtcctgatggatatacaggagatggggtacactgtgacgacgtagatgaa
tgccagtttaacccatgttaccctggtgtccggtgtgtgaacactgctccaggttttcgc
tgtgagaaatgccctctgggatacctaggaccagagataaatggagtgggagtgtcctat
gcaaagtcccacaaacaggcgtgtgacgatatagatgagtgtctgggcccgcctgagaat
ggaggttgcactgccaactcacactgccacaacactataggctccttccgctgcggtgag
tgcaaaaccggcttcacaggtgatcaggtgaaaggctgccatggtatcaggctttgcccc
aatggtcaacccaacccctgcgacgctaatgccaattgtgtcgtggagagagacggcagc
attagctgtgtgtgtggcgttggttgggcaggtaatggctatgtgtgtggaaaggacaca
gatattgacgcatatcctgacagtaagctccagtgcagagacaacaactgtgagaaggat
aactgtgtgtttgtgccaaactctggccaagaggatgcagacagggatgggatgggtgac
tcctgtgatgatgatgcagacagtgatggcattattaacatagatgacaactgctggctt
attcctaatgtggaccaaaggaacagtgataaggatctccatggcgatgcttgtgacaat
tgcagaacagttgataaccccacacagagggataccgatcaggacgggctgggagatgaa
tgcgatgatgatatggatggggacggtttgaagaatattcttgacaactgccagcgagtc
cccaatgtagaccagaaagacagagacaacgatggggtgggagatgcctgtgacagctgt
cccgatatggccaactctaaccagtctgactcagatgatgaccttgtaggagatagctgt
gatgacaacattgacagtgatggtgatggacaccagaacacaaaagacaactgtcccaca
atcatcaattcctctcagttggacactgacaaggatggaatgggagatgaatgtgacgat
gacgatgataacgacggcatactggacgatgatgacaactgcagactagttcccaaccca
gaccaaaaggacacagataataacagagttggagacgcatgcgaaggagattttgacaaa
gacaatgtcatcgacacaattgaccactgtccagagaatgccgaggtcaccctgaccgac
ttcagagcctatcagaccgtagtgctggatccagaaggggactctcagattgaccccaac
tgggtggtcctcaatcagggcatggagatagttcagacaatgaactctgaccctggcctt
gctgtaggctacaaagcattcagtggggtcgactttgagggaacattccacgtgaacaca
atgacggatgatgactacgccggcttcatcttcggctaccaggactcctcctccttctac
gtggtgatgtggaaacagacagaacaaacctactggcaggctgcacccttcagagcagtc
gctgagccgggaatacaactcaaggttgtgaagtcaaagacaggtccgggtgagtatctg
aggaactccctctggcacacaggacacacccctgagcaggtccgtctcctgtggaaggat
ccgaggaacgttggctggaaggacaaggtgtcctaccgctggttcctccagcacagacca
caggttggatacatcagggctcgcttctttgagggtccaaagctggtggcagacacaggg
gtgatcattgacaccagtatgagaggtggaagactgggcgtgttctgcttctctcaggaa
aatataatctggtccaatctgaagtaccgttgcaacgacactgttcctgctgactacgag
gatctcaatgcccagaacacagagtga
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