Etheostoma spectabile (orangethroat darter): 116689240
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Entry
116689240 CDS
T08457
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116689240 (tfip11)
Spliceosome [BR:
esp03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
116689240 (tfip11)
Other components
Complex C specific factors
116689240 (tfip11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
116689240
NCBI-ProteinID:
XP_032371565
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Position
5:8761016..8767643
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AA seq
832 aa
AA seq
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MSMSHLYGRREEEEEGVEIESFEVTDWDLANEFNPDRRRHRQTKDQATYGIWADRDSDED
ERPSFGGKKSKDYSAPVNFVSAGLRKSAAEEKQQQVEGGSDDSEEDGPSAPPPPRGAAPK
KLQMGNFRGNQSQRFAGGIQSGKGIGTWEKHTKGIGQKLLQKMGYQPGKGLGKNAQGIIN
PIEAKVRKGKGAVGAYGNERTQQSLQDFPVVDSEEEEEKEFQKELGQWRKDPAGSIGKKK
PKYSYRTVDELKAKGKLAGRSTAASAGELAQVKVIDMTGREQKVYYSYSQMSNKHSVPDE
GPPSLLAQDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESLALQ
SRLDAEQESIRRMEAVLALVGRFPSGETAPGEGPTLQECARIFETLQTDYYEEYKTMGLA
DLAVAVVQPLLKEKVRSWDPLKDSSYCLEDIGQWRAILESRDLHNSTPDSNMDPYHRLLW
EVWIPVMRPCVSSWQPRLVGPMVDCVEVWAPLLPVWILDHLMEQLILPRLQREVDNWNPL
TDTVPIHSWIHPWLPLLQSRLEPLYPPIRSKLSNALQRWHPSDASARLILQPWKDVFTPG
AWEAFMVKNIIPKLALCLEELVINPHQQQMEPFHWVMDWEGMLSPSSLVSLLDKNFFTKW
LQVLCSWLSNSPNYEEITKWYLGWKSMFSDALLSQTLIKEKFNEALDIMNRAVSSGMGGY
MQPGARENIAYLTQTERRKDFQYEAMQERRDAESVAHRGISTGVPTNFKDLIQTKAEENN
IVFMPLVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgtcccatctgtatgggaggagagaggaggaggaggaaggagtggagatagag
agctttgaggtgacagactgggacctggccaatgagttcaacccagaccgtcgtagacac
aggcagaccaaagaccaggccacctatgggatctgggctgacagggactcagacgaggat
gaaaggcctagctttggaggcaagaaatccaaagactacagtgccccagtgaactttgtg
agtgctggtctgcgtaagtctgcagctgaggagaaacaacaacaagtagaaggaggctct
gatgactcagaggaagatggtccttcagcgcctccccctcctcgcggcgctgcacccaaa
aaactccagatgggtaatttccgggggaaccagtcccagaggtttgcaggtggtatacag
tctggtaaaggcattggtacctgggagaagcacacaaagggaattggacagaaacttctg
cagaaaatgggctaccaaccaggcaaaggccttggcaagaatgctcaaggtattataaac
cccatcgaggcaaaagttcgtaaaggcaagggagccgtgggtgcttatggcaatgagcga
acccagcagagtcttcaggattttcctgtggttgactcagaggaagaggaggaaaaggag
tttcagaaggagctaggccagtggcgtaaggatcctgcaggctctatagggaagaagaaa
cccaagtactcttatagaactgtggacgagctgaaggctaaaggcaagctggcagggcgc
agtacagcggcatccgctggagagttggcacaggtcaaggttatagatatgactggaaga
gaacaaaaggtatattacagttacagtcagatgtccaacaagcacagtgttccagatgaa
ggtcctccaagcttgttggctcaggatcagaagggatctggctttgctctccctgaactc
gaacataacctgcagcttctgatagacctcacagaacaggacatattacagtctgccaga
cgtctgcagcatgaaaaagatgtggttgtgtctctgagccatgagtcactagcactgcag
agcagactggatgcagagcaagagtccatccggagaatggaggccgttttggccttggtg
gggcgttttccttctggggagacggcacctggggagggacccaccctgcaggagtgtgca
cggatctttgagactttacaaacagactattatgaagaatacaagacaatgggattggca
gacctggctgtagccgttgttcagccgttacttaaagagaaagttcgttcctgggaccct
ctgaaggacagctcctattgtctggaagacatcggtcagtggagagcaatccttgaatct
agagacctccataacagtaccccagattcaaacatggacccttaccacagactgttgtgg
gaagtttggatcccagtgatgcggccctgtgtgtcaagctggcagcctcgtttagtaggg
ccaatggtggactgcgtggaagtgtgggctcctcttcttcccgtgtggatcctggaccac
ctgatggagcagctgatcttaccacgtctacagcgagaggtggataactggaacccttta
actgacacagtgcccatccactcctggatccatccttggcttcctctgctccaatcacgt
ctagagcctctttacccaccaatcaggagcaaactatccaatgccttgcagcgatggcat
cccagcgacgcttcagcccgcctcatcctgcagccttggaaagatgttttcacaccaggt
gcatgggaggccttcatggtgaaaaatatcatccctaaactagctctgtgtctggaagag
ctggttatcaacccgcatcagcagcagatggagccatttcactgggtgatggactgggag
ggcatgttgtccccttccagccttgtgtctctgctggacaaaaacttctttacaaagtgg
ttgcaggtcctatgttcgtggttgagcaacagtcctaactatgaggaaatcaccaaatgg
tacctgggttggaaaagcatgtttagtgacgccttgttgtcacagacgctcatcaaagag
aaattcaacgaagctttggacatcatgaaccgcgcagtgtcttcaggcatgggtggatat
atgcaacctggtgcaagggagaatattgcatatctaacacagacagagagacgaaaggac
ttccagtatgaagcgatgcaggagcgcagggatgctgagagcgtggctcacagaggcatc
agtactggtgtgccgactaacttcaaagatcttatccagactaaggcagaggagaacaac
attgtttttatgcccttagtggccaaacggcatgagggcaaacagctgtacacctttggg
cgtattgtcatttacattgacagaggggttgtgtttgtgcaaggagaaaagacttgggtg
cccacgtctttgcagagtctgatagatatggccaagtga
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