Etheostoma spectabile (orangethroat darter): 116689470
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Entry
116689470 CDS
T08457
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116689470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
esp04121
]
116689470
Enzymes [BR:
esp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116689470
Ubiquitin system [BR:
esp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116689470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-rbx1
zf-RING_4
zf-RING_11
zf-RING_10
DZR_2
zf-C3HC4_4
Zn_ribbon_6
DUF1272
Motif
Other DBs
NCBI-GeneID:
116689470
NCBI-ProteinID:
XP_032371914
LinkDB
All DBs
Position
5:complement(30010962..30032169)
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AA seq
431 aa
AA seq
DB search
MEIITDISLIIDKIAYDDSGSLMRILQPYRFEKKASCYVVKGTYEELEQLSTKLSRRHSF
SPVTHGPTRPQDMHASPHVKPVDVSGAVMSYIELKCAKELAKIQGKSVVIETQPDPRTVH
SQPSDTVRVTFTSPHGSLHRVRADFVRQQFITFYQRTAADLQVTCVPVGPQDHQELERRF
PGLVLKHNHRRSEVTAIGPFVHIAKLKEYLSQNRPSSSKSPVNEGPAEAPSSKTSGPSSP
HLKDPEEEPCPICMEPIATAEKKTLPCKHSFCRNCVETAFQYKPVCPTCGEMYGTLTGTQ
PEGGEMRPTTSSASLPGYEKYGTITIRYYIPSGIQKEEHPSPGQPYEGASRTAYLPDSPE
GRRILTLLRRAFDQRLVFTVGRSTTTGRNNMVTWNDIHHKTSTHGGPTCYGYPDPDYLSR
VGDELKAKGIE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggagattatcacagacatcagtctcatcattgataaaatcgcttacgacgactctgga
agcttgatgaggattcttcaaccataccgttttgagaaaaaggcttcctgctatgtagtg
aaaggaacctatgaggagctggagcagctgtccaccaaactgtcccggagacatagcttc
agtcccgtcacccacggaccaacccgtccgcaggacatgcatgcttcacctcatgtcaaa
cctgtggacgtatccggggctgtcatgtcctacattgagctaaaatgtgcgaaagaactt
gcgaagattcaagggaagagcgttgtcattgaaactcagcctgaccccagaacagtacac
agtcaacccagtgacacagtacgggtgactttcacatcgccccatgggtccctgcaccgt
gtccgtgccgacttcgtcagacagcaattcatcacattttaccagcggactgccgctgac
ctgcaggtcacatgtgtccccgtgggtccgcaggaccaccaagaactggagaggagattt
cccggcctcgtcttgaagcacaaccacagaagatctgaagtcactgcgatcgggcctttt
gtgcacattgctaaattaaaagagtacctttcacaaaacaggccgagctctagcaagagt
ccagtgaacgaaggtccagcagaggccccaagcagcaaaacctcgggtccttcatcccca
cacttaaaagatcccgaagaagaaccatgtccaatctgtatggaaccgatagcaaccgcc
gagaaaaagactctgccgtgcaagcactcgttctgcagaaactgtgtggaaacggccttc
caatacaagcctgtgtgtccgacgtgtggagagatgtacggcacgttgacagggacgcag
cccgagggaggcgagatgaggcccaccacgagctccgcatctctgcctggatacgagaaa
tatggaacaataaccatccgttattacattccaagtggcatccaaaaggaggagcacccc
agccccgggcagccatatgaaggtgcgtcccgtacggcctatctcccagactccccagag
ggccgacggatcctgacgctgctgaggcgggcctttgatcagagactggtcttcaccgtg
ggtcgctccaccaccaccggcaggaacaacatggtcacatggaacgatattcaccacaaa
acctccacccatgggggaccgacttgctatggatacccagaccctgattatctcagccga
gttggagatgaactcaaagccaagggaatagaatga
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