Etheostoma spectabile (orangethroat darter): 116689486
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Entry
116689486 CDS
T08457
Symbol
nr6a1
Name
(RefSeq) nuclear receptor subfamily 6 group A member 1 isoform X1
KO
K08561
germ cell nuclear factor
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116689486 (nr6a1)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
esp03310
]
116689486 (nr6a1)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Zinc finger
Cys4 germ cell nuclear factor
116689486 (nr6a1)
Nuclear receptors [BR:
esp03310
]
6. Germ cell nuclear factor
6A. Germ cell nuclear factor receptor
116689486 (nr6a1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116689486
NCBI-ProteinID:
XP_032371930
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Position
5:complement(3921265..3968278)
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AA seq
454 aa
AA seq
DB search
MKEENPLDDDPADQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSRDKNCE
MSRKQRNRCQYCRLLKCLQMGMNRKAIREDGMPGGRNKSIGPVQITEEEIERIMSGQEFK
EDAPEHTWGTNGDSNHSSPSNGASEGNQPSPASTLSSNRSVEMNGYTAALRDQYLNTSMS
THYQLLPHLFSYAAQSGLLAPQPRSLYPQSHPLVLQLVAAEDLAPLATPMLIEDGYKVTQ
VELFALLCRLADELLFRQISWIKKLPFFCELSIEDYTCLLSSTWQELILLSCLTIYSAQI
FGDLADVTAKYTPSDDELQGFSEDGMEVMERLIYLFRKFHQLKISNEEYACMKAINFLNQ
DIRGLSNISQLEQLNKRYWYVCQDYAEYKYPHQPKRFPEIMMCLPEIRCIAGKLVNVPLE
QLPLLFKAVLHSCKSSLTSYRTGPSPCVTTSSGN
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaagagaacccactggatgatgatccagcggaccagcgtacttgccttatctgt
ggagatcgcgccacgggcctgcactatggcatcatctcctgcgagggctgcaagggcttc
ttcaagcgcagcatctgcaacaagcgcgtgtaccgctgcagccgcgacaagaactgcgag
atgtcgcgcaagcagcgcaaccgctgccagtactgccgcctgctcaagtgtctgcaaatg
gggatgaaccgcaaagcaatcagggaggatggcatgccaggagggaggaacaaaagcatc
gggcctgttcagatcacagaggaggagatagagcgaatcatgtcgggccaggagttcaag
gaggacgccccggagcacacctggggcaccaacggcgacagcaaccacagctccccgagc
aacggagcctcggagggcaatcagccgtcgcccgcctccaccctgtcatccaaccgctct
gtggaaatgaacggctacacggcggccctcagggaccaatacctcaacacctccatgtcc
acacactaccagctcctgcctcacctgttcagctatgcggcccagtccggcctgctggcc
ccccagccccgcagcctctacccacagtcccacccactggtgctgcagctggtggctgct
gaagacctggcccccctggcaacccctatgctcatagaagacgggtacaaagtgacccag
gtggagctgtttgcactgctgtgccgcctggcggacgagctgctcttccgccagatctcc
tggatcaagaagctgccgttcttctgcgagctctccatagaggactacacctgcctgctc
agctccacctggcaggagctcatcctgctctcctgcctcaccatctacagcgcccagatc
tttggcgacctggccgacgtcactgccaagtacacgccgtctgacgacgagctgcagggc
ttcagcgaggacggcatggaggtgatggagaggttgatctatctgttccgcaagttccac
cagttgaagatcagcaacgaggagtatgcctgtatgaaagccatcaacttcctcaaccaa
gatatcagaggattgtccaacatctcccagctggagcagctgaacaagcgctactggtat
gtgtgtcaggactacgctgaatataagtacccgcaccagcccaaacgcttccctgagatc
atgatgtgtctccctgagatccgctgcatcgcagggaagcttgtgaatgtccctctggag
cagctcccactcttgttcaaagcagtcttgcactcctgcaaatccagcctgaccagctac
aggaccggcccgtcgccctgcgtgaccacctcctccggaaactag
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