Etheostoma spectabile (orangethroat darter): 116689709
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Entry
116689709 CDS
T08457
Symbol
gtf2h3
Name
(RefSeq) general transcription factor IIH subunit 3
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
esp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116689709 (gtf2h3)
09124 Replication and repair
03420 Nucleotide excision repair
116689709 (gtf2h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116689709 (gtf2h3)
03400 DNA repair and recombination proteins [BR:
esp03400
]
116689709 (gtf2h3)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116689709 (gtf2h3)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116689709 (gtf2h3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
Motif
Other DBs
NCBI-GeneID:
116689709
NCBI-ProteinID:
XP_032372206
LinkDB
All DBs
Position
5:7017630..7022090
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AA seq
300 aa
AA seq
DB search
MASEDEINLLVVVVDVNPIWWGQQAQRETELTLSKCLDAVMVLGNAHISMARTNRLAVIA
SHCQDSHFLYPKKSWRAGDSGGEDACSSGDGKYELLAVANNLIAEEIRNVMSKAEVKGNS
TDTFLAGSLAKALCYIHRVSKDLEAGQEIKSRILVIKAAEDSALQYMNFMNVIFAAQKQN
ILIDACVLDSESGLLQQACDITGGLYLKIPQKVALAQYLLWVFLPDSEQRSQLVLPPPAH
VDYRAACFCHRNLIEIGYVCSVCLSIFCNFSPICTTCETAFKIQLPQMVKPKKKKLKQPT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcatcggaagatgaaataaatctgctggtcgtcgtcgtggatgtaaatcccatttgg
tgggggcagcaagctcaacgtgagacagagctcaccctgtcgaagtgtctggatgctgtc
atggttttaggaaacgcccacatttccatggccaggactaacaggctggctgtcatcgcc
agccactgtcaagacagtcacttcctatatcccaaaaagagctggagagcgggggacagc
ggtggggaagatgcatgctccagtggggatggaaaatatgaactcctggcagtcgccaat
aaccttattgctgaagagatcaggaatgttatgtcaaaagctgaagtgaagggaaattca
acggatacttttttggctggatcccttgccaaagctctctgctatattcacagagtctca
aaagacttagaagctggacaggagataaaatcaagaatattggtgataaaagcagctgag
gactctgccctccagtacatgaacttcatgaatgtcatttttgctgctcagaagcagaac
atcctgatagatgcctgtgtgttggactcagagtcgggtctccttcagcaggcttgtgat
ataacgggaggattgtacctcaagataccacagaaagttgccctggcacagtaccttttg
tgggtgttcctgccggactctgagcagcgttcacagctggtgctgccaccgcctgcacat
gtggactacagagctgcatgtttctgccatcgtaacctcattgagattggctacgtgtgc
tcagtttgtctgtcaatattctgcaacttcagccctatctgcacaacttgcgaaactgcc
ttcaaaatccagctaccacagatggttaagcccaagaagaagaaactcaaacagcctaca
tga
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