KEGG   Etheostoma spectabile (orangethroat darter): 116689719
Entry
116689719         CDS       T08457                                 
Symbol
taf5l
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
esp  Etheostoma spectabile (orangethroat darter)
Pathway
esp03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:esp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    116689719 (taf5l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:esp03021]
    116689719 (taf5l)
   03036 Chromosome and associated proteins [BR:esp03036]
    116689719 (taf5l)
Transcription machinery [BR:esp03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     116689719 (taf5l)
   Coactivators
    SAGA/TFTC/STAGA complex
     116689719 (taf5l)
Chromosome and associated proteins [BR:esp03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     116689719 (taf5l)
    STAGA complex
     116689719 (taf5l)
    TFTC complex
     116689719 (taf5l)
    SAGA complex
     116689719 (taf5l)
    SLIK complex
     116689719 (taf5l)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WD40_WDHD1_1st WD40_CDC20-Fz WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR36-Utp21_2nd WD40_MABP1-WDR62_2nd TFIID_NTD2 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_Aladin Beta-prop_SCAP NBCH_WD40 ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_WDR41 Beta-prop_IFT140_1st RMC1_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_EIPR1 Tricorn_2nd Nbas_N Beta-prop_WDR19_1st PEP5_VPS11_N Beta-prop_IP5PC_F WD_LRWD1 DUF7165 PROPPIN Beta-prop_ELP1_1st
Other DBs
NCBI-GeneID: 116689719
NCBI-ProteinID: XP_032372218
LinkDB
Position
5:37585446..37597449
AA seq 605 aa
MKRGRTEQIQYAVTQYLKRRQYVDTDGSLKGAKLSQSAEEMAASLTAQTESGCANIVSAA
PCQSDPQQYETQYSRLRSFLSETEISWAKEVSGLLYPLFVYLHLDMVRCGLKGAVDGFYG
RFHGAFLQDGEQRATVEQLRHVLTAQDVAANPKLSAFLEHKYVVHLTEPAYGYLLRYLQS
EDNGALCRVLSTHLQVEVSASRRTDYQLYGAAGGATAAPNSTSSWAGVDGAGVDGEGVEV
PAGIPQSEAALEALQDCIKKVREGPPTLTTVCFYAFHHTEQTLNAAEVSADSRLLAAGFD
SSAVKLWSLRARKLRARPHRADVSLIHLACDVLEEEADEEDASGSEVKTLRAHSGPVFRT
AFLTDSSGLLSCSEDTTIRYWDLGSFANTALYRGHAYPVWDLDVSPCSLYFASGSHDRTA
RLWTFSRTHPLRLYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSTQQGASVRLFTGHR
GPVLSLAFSPNGKYLASAGEDQRVKLWDLASGALFKDLRGHTDGVTSLSFSPDSSLVASA
SMDNSVRVWDIRNSHGGGGGGTPADGSSGELVGLYAGNTSSVLNVQFMACNLLLVTGTAQ
EKAEP
NT seq 1818 nt   +upstreamnt  +downstreamnt
atgaagcgtggtcgcactgagcagatccagtatgccgtgacccagtacctgaagcggagg
cagtatgtggacaccgacggctccctgaaaggagccaagctctcccagtcagcggaggag
atggccgccagcctcacagcgcagacggagtcgggctgtgccaacatcgtctccgcggct
ccctgccagtccgacccccagcagtacgagacccagtactccaggctgcgatccttcctg
tcagaaaccgagatatcctgggcgaaggaggtgagcggcctcctctacccgctcttcgtc
tacctccacctggacatggtgcgctgcggcctgaagggggcagtggacggcttctacggc
cgtttccacggcgccttcctccaggacggcgagcagcgcgccaccgtcgagcagctgcgc
cacgtcctcaccgcgcaggacgtcgccgccaaccccaagctcagcgccttcctggagcac
aagtacgtggtgcacctgacggagccggcctacggctacctgctgcgctacctgcagagc
gaggacaacggcgccctctgccgcgtgctcagcacacacctgcaggtggaggtctccgcg
tcgaggcgcaccgactaccagctgtacggcgctgccggcggggcgaccgccgccccgaac
tccacctcctcctgggcgggagtggacggggcgggagtggacggggagggggtggaggtc
cccgcggggatcccgcagagcgaggcggccctggaggcgctgcaggactgcatcaagaag
gtccgcgagggcccccccacgctcaccaccgtgtgcttctacgccttccaccacacggag
cagacgctgaacgccgccgaggtgtcggccgacagccggctgctggccgccggcttcgac
agctccgccgtgaagctctggagcctccgggccaggaagctgagggccagaccgcatcgg
gccgacgtgtcgctcatccacctggcctgcgacgtcctggaggaggaggcggatgaagag
gacgcctccggcagcgaggtgaagacgctgcgggcccacagcggcccggtgtttcgcacc
gccttcctgacggacagctcgggcctgctgtcctgctccgaggacaccaccatccgctac
tgggacctgggcagcttcgccaacacggcgctgtaccggggccacgcctacccggtgtgg
gacctggacgtcagcccctgcagcctctacttcgccagcggctcgcacgaccgcaccgcc
cgcctctggaccttctcccgcacccacccgctgcggctctacgccgggcacctcgccgac
gtcgactgcgtcaagttccaccccaactccaactacctggccaccggctccacggacaag
accgtccgtctgtggagcacccagcagggggcgtcggtccggctcttcaccgggcaccgc
ggcccggtgctgtccctcgccttctcccccaacgggaagtacctggcgtcggccggcgag
gaccagagggtgaagctgtgggacctggcgtcgggggcgctgttcaaagacctgcgcgga
cacacggacggcgtcaccagcctgtccttcagccccgacagcagcctggtggcgtcggcc
tccatggacaactcggtgcgggtgtgggacatcaggaactcccacggcggggggggtggg
gggacgccggccgacgggtcgtccggcgagctggtggggctgtacgccgggaacaccagc
agcgtgctcaacgtccagttcatggcctgcaacctgctgctggtcacggggaccgcgcag
gagaaagctgaaccgtag

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