Etheostoma spectabile (orangethroat darter): 116689794
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Entry
116689794 CDS
T08457
Symbol
pole
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03030
DNA replication
esp03410
Base excision repair
esp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116689794 (pole)
03410 Base excision repair
116689794 (pole)
03420 Nucleotide excision repair
116689794 (pole)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
esp03032
]
116689794 (pole)
03400 DNA repair and recombination proteins [BR:
esp03400
]
116689794 (pole)
Enzymes [BR:
esp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
116689794 (pole)
DNA replication proteins [BR:
esp03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
116689794 (pole)
DNA repair and recombination proteins [BR:
esp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
116689794 (pole)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
116689794
NCBI-ProteinID:
XP_032372310
LinkDB
All DBs
Position
5:8487124..8507385
Genome browser
AA seq
2295 aa
AA seq
DB search
MVLQNSGRYKAERGQGGGDQENQDDGSSMSALKRLERSQFTDEMDARFGFDRMKEPGEKT
GWLINMHPTEILDDDKRMISAVDYYFVQEDGSRFKVALPFKPYFYIATKKNCEREVISYM
SRKFQGKVAKLEVIPKEDLDLPNHLVGLKRSYIKLSFSTVDELIKVKREISPAVRKNRER
EQSNDAYTSMLSSALSGGNVTSAEEDGMSKNISDQLDNILDMREYDVPYHVRLSIDLKIH
VAHWYNVRYRGSAYPPEIVRRDDLVERPDPVVLAFDIETTKLPLKFPDAESDQIMMISYM
IDGQGFLITNREIVSENIEDFEFTPKPEYEGPFTVFNEDDEAALIQRWFDHVQETKPNIF
VTYNGDFFDWPFVETRAALHGLNMHREIGFQKDNQGEYKSSQAIHMDCLRWVKRDSYLPV
GSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYLYMKYVHPFIF
ALCTIIPMEPDEVLRKGSGTLCEALLMVQAFHANIIFPNKQEQVFNKLTDDGHVMDSETY
VGGHVEALESGVFRSDIPCRFKMNPAAFDFLLQRVEKTMRHAIEEEEKIPLEQVTNFNEV
CEEIKKKLTSLKEVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATCAACDFNKP
GATCQRRMAWQWRGQIMPASRSEFHRIQQQLESEKFPPFFPNGPPRAFHTLNREEQAKHE
KKRLADYCKRAYKKTHVTRLEERVTTICQRENSFYVDTVRAFRDRRYEFKGLHKVWKKKL
SAAQDSGDAAEIKRCINMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCYTG
ANIITQARELIEQIGRPLELDTDGIWCVLPNTFPENFVVKTSNEKKPKVTISYPGAMLNI
LVKEGFTNDQYHELVEPASITYNVRSENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVF
NEDGSLAELKGFEIKRRGELQLIKIFQSSVFEAFLKGTSLEEVYASVAKVADYWLDVLYS
KAANMPDTELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKDAGLSCRYV
ISRKPEGSPVTERAIPLAIFQAEPSVKKHFLRKWLKMPSLHDLDIRSILDWSYYIERLGS
AIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDIYKQKKISELFTSEGKRQVAHQP
LEAGQAADIEDFGMPARPLQPAILISTKRKRASQGEDSQVESQDVELTQSWREILGPPPP
MGKSREERLVWLRYHKKKWELQLRQRKERKKKRRLLDGEAQPVGGGVIRGGPTTGLGSFL
RRTARSILDMPWQIVQIAETSHPGLYKLWAVIGHDLHCMKLNIPRVFYVNQKVPKQEEGA
TYKKVNRMLPRSNIVYYLYEYCVPEDMYQEHINEINADLSAPDIEGVYETQVPLLFRALV
QLGCVCMVNNHVLRGLAGREADTFDLEHLEMRSLAQFSYLEPGSVRHIYLYHHSQGHKAL
FGLFIPSQRKASIFVLDTVRSNQMPNLTNLYTAERTALLEKTTEELLPPEKHNFEVRAEN
DAKAINRALQRILVNYKEERRGPTLIAVQSNWDLRRLAAGMPVLEEFPVVPVHVVDEISY
NVLDWQRHGARRMIRHYLNLDSCLSQAFDMARYFHLPVGNLPQDVSIFGSDLFLARHLRK
HNHLLWLSPTARPDLGGKEADDSRLVMESDDRGSVEINAQGCYSTVCVELDLQSLAVNTI
LQSQHVNDMEGGASLGVSFDVIQQASLEDMMSGNQGASALASYDETALCSNTFRILKSMV
VGWVREITQYHNVYADNQVMHFYRWLRSPSSLLYDPALHRTLHNMMKKVFLQLVSEFKRL
GSTVVYGNFNRIMLCTKKRRIDDAIGYVEYITKSIHSREIFHSLSISFSRCWEFLLWMDP
ANYGGVKGKLPASIMYGEGGAEQKKKSRGEGDEESSDDDDEDEAVVEEDEGDGETDDVEE
LIESNWNIMQYLPQTASCQKYFLMIVSAYIAAVYHSMKEELRRNAPGATPVKRRGGSQAS
QQAVGDLSALPGMISFSQEYVSSELTQNFFTITQKIQKKVTGNRSVNQPSEMFPVLPGSH
LPLNNPALEFIKYVCQVLSLDANIVNQVNKLKRDLLRLVDVGEFSVEAQFCDPCNSYILP
EVICHHCNFCRDLDLCRDPSVAQDGLVLPQWFCSNCQAQYETESIEMALVEALKKKLMSY
TLQDLVCTKCKGVKEANMPLYCKCAGDFDLTFPTKSFSEQITVFRNVASHYKMSFLGETL
DWLLVMSPHISQNAH
NT seq
6888 nt
NT seq
+upstream
nt +downstream
nt
atggttctgcaaaacagcggacggtacaaagcagagcgaggacaaggcggaggagaccag
gaaaaccaggacgatggatcttccatgtcggccctcaagcggctggagcgcagccagttc
accgacgagatggacgcccgcttcggattcgacaggatgaaggagccgggggagaaaaca
ggctggctgatcaacatgcatcctaccgagatcctggatgatgacaagaggatgatcagt
gctgtggactattatttcgtacaggaggatggaagcaggtttaaggtggccctccccttt
aagccatatttttacattgccactaaaaagaattgcgaaagagaagtaatctcatacatg
tcaaggaagtttcaaggaaaggtggcgaagcttgaagttatcccaaaagaggacctagat
ctgccaaaccatctagttggactgaagagaagctacatcaagctttcattcagcaccgtg
gacgagctcatcaaagtcaagcgtgagatctcgccggctgtacgcaagaacagagagagg
gagcagtccaacgacgcctacacctcaatgttatcaagtgccttatcaggtggcaacgtg
acctcagcagaggaagacgggatgtcaaagaatatttccgaccagttagacaacatattg
gacatgagagagtatgatgtgccctatcatgtgcgattgtccattgacctcaagatccac
gtggctcactggtataatgttcgatacagaggcagcgcctatccaccagagattgtacgg
agagatgatcttgtggagcgaccagaccctgttgttttggcttttgacatcgagaccacc
aaacttccactgaaattcccagacgcagaaagcgatcagattatgatgatctcctacatg
attgatggacagggttttttaatcacaaacagagagattgtgtctgagaatattgaagat
tttgagttcactcccaagccggagtatgaaggtcctttcaccgtttttaacgaagatgat
gaggcggctctcattcagaggtggttcgatcacgttcaagaaaccaagcctaacatattt
gtaacctacaatggtgacttctttgactggccttttgttgagactcgggccgcccttcat
ggattgaacatgcacagggagatcggtttccagaaggataaccagggagagtacaagtcc
agtcaagctatccacatggactgtttaaggtgggtaaagagagacagctatctgccggtg
gggagtcataatctgaaggcagcagcgaaggctaaattgggctacgacccagtggagctg
gacccggaggagatgtgccgcatggcaactgaggagccacagactttagccacctactct
gtgtcagatgctgtggccacatattacctgtatatgaaatatgttcaccctttcatcttc
gctctgtgcaccatcatccccatggagcctgatgaggtgctgcgtaaaggttctgggacc
ttgtgtgaagcgctgctcatggtgcaggccttccacgcaaacatcatcttccccaacaag
caggagcaggtctttaacaaactgacagacgacggccacgtcatggactctgagacgtac
gtgggcggccacgtggaggcgctggagtcaggagtgttccgcagtgacatcccctgccgt
tttaagatgaacccagctgcttttgacttcctgctgcaaagagttgagaagaccatgcgc
catgccattgaggaggaggagaaaatccctttggagcaagtcaccaactttaatgaggtt
tgtgaggaaataaaaaagaagctgacttccctgaaggaggtcccaaacaggattgaatgc
ccgctcatctaccatctggatgttggggcgatgtaccccaatatcatcctcaccaaccgc
ctgcagccttccgctatggttgatgaggccacttgtgctgcctgtgactttaacaagcct
ggtgccacgtgccagaggaggatggcctggcaatggagagggcaaatcatgcctgctagc
cgcagtgagttccaccgcatccagcagcagcttgaatctgagaagttcccgccatttttc
cccaacggtccgcctcgggccttccacaccctcaacagagaggagcaggccaaacatgag
aagaaacgtctggcagactactgtaagagggcctataagaagacacatgtcacccggctg
gaggagcgagtcaccaccatctgtcagagagaaaactccttctatgtcgatacagtgaga
gccttcagagatcgtcgttacgaattcaaaggactccacaaggtgtggaagaagaaactg
tcggcagctcaggacagcggagatgctgctgagataaagcgctgcataaacatggagatc
ttgtatgattctcttcagctggcgcacaagtgtattctcaactccttctatggctacgtc
atgcggaaaggggcgcgctggtactccatggagatggctggcattgtgtgctacactgga
gccaacatcatcactcaggccagagagctcattgaacaaatagggaggcccctggagttg
gacactgatggtatctggtgtgtcctgcccaacacctttcctgagaactttgtggtgaaa
accagcaatgagaagaagcccaaggtgaccatctcttacccaggggccatgctgaacatc
ttggtgaaggagggattcaccaacgatcagtaccacgagctggtggagcccgcgtccatc
acctacaacgtcaggtcggagaacagcatcttctttgaggtggatggaccgtacctggcc
atgatcctgcctgcctccaaggaggaagggaagaagttgaagaaaaggtatgctgtgttt
aatgaggatggctctctggctgaactgaagggatttgaaatcaagagaagaggagagctc
cagctcattaagatttttcaatcgtcggtgtttgaggcttttctcaaaggtacctctcta
gaggaggtgtacgcctctgtggccaaagtggctgactactggttggatgttctgtacagc
aaggctgccaacatgccagatacggagctgtttgaactgatttcagagaatcggtcgatg
tccagaaagctggaggactacggagagcagaagtccacttctatcagcacagccaagaga
ctggctgagttcctgggagaccaaatggtgaaggatgctggtctgagctgtcgctacgtc
atctcccgaaaacccgagggttcacctgtcacagaaagagccattcctctggccatcttc
caggcagagcccagcgtaaagaaacatttccttcgcaagtggctaaagatgcccagcctg
catgacttggacatccgctctatccttgattggagttattacatagaaaggttgggtagt
gccattcagaaaatcatcacaattccagcagctcttcaacaggtgaagaatccggtaccc
agagtgaggcaccctgactggcttcacaagaaactcttggagaaaaatgatatctacaag
caaaagaaaatcagtgagctgttcaccagtgagggcaagagacaggtggcccatcagcct
cttgaagcaggccaagctgcagacatagaggactttgggatgccagccagacctctgcag
ccagccatactcatcagcactaagcggaagcgggcgtctcagggagaggacagccaggtt
gagtctcaggatgtcgagctcactcagtcctggagagagatcctggggccacctccacct
atgggaaagtcacgggaggagcgtctagtgtggctgcgttaccataagaagaagtgggag
ctgcagctgaggcagaggaaggagagaaagaagaagaggaggctgctggatggtgaagct
caacccgtagggggaggagtgatccgaggcggacccaccaccggcctgggaagcttcctc
cgcagaacagcgcgcagcatcctggacatgccatggcaaattgtgcagattgcagagact
agtcaccctggtctgtacaagttgtgggctgtgattggacatgacctccattgcatgaag
ctcaacatcccccgtgtcttctatgtcaatcaaaaagtcccaaaacaggaggagggagcc
acatacaaaaaggtgaaccgcatgctgcctcgctccaacatagtgtactacctttatgag
tactgtgtcccagaggacatgtaccaggagcacatcaatgagatcaatgctgacctgtcg
gccccagacattgaaggagtctatgaaacacaggtcccgttgctgtttcgtgcactggtg
cagctcggatgtgtgtgtatggtcaataatcatgttctgaggggcctggctggcagggag
gctgacacttttgacctggagcatctggagatgaggtccctggcccagttcagctacctg
gaacctgggagtgttcgtcacatatacctgtatcatcacagtcagggtcacaaagctctg
tttggccttttcatcccctctcagcgcaaagccagcatctttgtcctggacacagtcaga
agcaaccagatgcccaacctgactaacctctacacagctgaacgcactgctctcctggag
aagacaactgaggagctcctgcctccagagaaacacaactttgaggtccgagctgaaaat
gacgcaaaggctattaaccgcgctctgcaacgcatactggtaaactacaaggaggagcgc
cgtgggcccaccctcattgcggtgcagtccaactgggatttgcggcggttggcagcaggg
atgccggtgcttgaggagtttccagtcgttccagtacatgtggttgatgagatcagctat
aacgtgctggactggcaacgccacggtgcccggcgcatgatccgccactacctcaaccta
gacagctgtctgtcacaggctttcgacatggccaggtatttccatttacctgtggggaac
ttgcctcaggatgtgtccatctttggctcagacttgtttctggcaagacatctacggaaa
cacaaccacctgctgtggctctcacccacagccagacccgaccttggagggaaagaggct
gatgacagtcgtctggttatggaaagtgatgaccggggctctgtggagatcaatgctcaa
ggatgctattccacagtgtgtgtggagttggatctgcagagcctggcggtgaacaccatc
ctccaatcacagcatgtcaatgacatggagggcggagctagtctgggtgtcagttttgat
gtgatccagcaggcctcgttggaggacatgatgtcagggaaccagggagccagcgctctc
gctagctatgatgagactgctctctgctccaacaccttcaggatcttgaagagcatggtg
gttggatgggtcagagagatcacccagtatcacaacgtgtatgcagacaaccaggtgatg
cacttctaccgctggctgcgttctcccagctctctgctctatgaccctgcactgcaccgc
acactgcacaacatgatgaagaaggtgtttctacagttggtttcagagttcaaacgcctg
ggctcgactgtggtgtatggaaacttcaacaggatcatgctgtgcacaaagaaaaggagg
atagatgatgccataggctatgtggaatacatcaccaaaagcatccactccagagaaatc
ttccactctttgtccatctctttctcccgatgctgggagttcctgctgtggatggatccg
gcgaactacggcggcgtgaagggcaaactgcctgccagcatcatgtacggagagggagga
gccgagcagaagaaaaagagtcgaggggagggagatgaggaaagcagtgatgatgacgac
gaggatgaagccgttgtggaggaagatgaaggtgatggagagacagacgatgtggaggag
ctgattgagagcaactggaacatcatgcagtatctgccccaaactgcctcctgtcagaaa
tacttcctcatgattgtctccgcctacattgcagccgtctaccacagcatgaaagaggag
ctgagacgcaacgctcctggagcaacaccagtcaagagacgtggcggcagccaggcttcc
cagcaggccgtgggggatttgagtgctcttcctggaatgatctccttctctcaggaatat
gtgtctagtgagttgacacagaactttttcaccatcactcaaaaaatccagaagaaagtg
acgggtaacaggagtgtcaaccagccctcagagatgttccccgtccttcctggatcccac
ctgccactcaacaacccagcactcgagtttatcaaatatgtctgccaggtcctttcactg
gatgccaacatagtgaaccaggtgaataagctgaagagagacctcctacgcctggtggac
gtgggagagttttccgtggaagcccagttctgtgacccgtgtaactcctacatcctgcca
gaggtcatctgccaccactgcaatttctgtcgggaccttgacctctgccgcgacccatct
gtggcacaagatggattggttttgcctcagtggttctgctccaactgccaggcgcagtat
gagactgaatcgattgagatggctctggtggaggctctgaagaagaaactgatgagctac
actctgcaggacctggtgtgtacaaaatgtaaaggagtgaaggaagcaaacatgcccctg
tactgcaaatgtgccggagactttgacctcactttcccaaccaagagcttctctgaacag
atcacagtgtttcgaaacgtagcgtcccactacaaaatgagcttcctgggcgagaccctt
gactggttgcttgtcatgagcccacatatcagccagaatgcccactga
DBGET
integrated database retrieval system
