Etheostoma spectabile (orangethroat darter): 116689863
Help
Entry
116689863 CDS
T08457
Symbol
itgb5
Name
(RefSeq) integrin beta-5
KO
K06588
integrin beta 5
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04145
Phagosome
esp04148
Efferocytosis
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04810
Regulation of actin cytoskeleton
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116689863 (itgb5)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
116689863 (itgb5)
04148 Efferocytosis
116689863 (itgb5)
09144 Cellular community - eukaryotes
04510 Focal adhesion
116689863 (itgb5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
116689863 (itgb5)
04810 Regulation of actin cytoskeleton
116689863 (itgb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116689863 (itgb5)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
esp04515
]
116689863 (itgb5)
Membrane trafficking [BR:
esp04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
116689863 (itgb5)
Cell adhesion molecules [BR:
esp04515
]
Integrins
Integrin beta subunits
116689863 (itgb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
EGF_integrin
PSI_integrin
Integrin_b_cyt
EGF_2
I-EGF_1
vWA_SIBA-E
EGF_Teneurin
DUF2975
Motif
Other DBs
NCBI-GeneID:
116689863
NCBI-ProteinID:
XP_032372408
LinkDB
All DBs
Position
5:complement(35283775..35399053)
Genome browser
AA seq
1109 aa
AA seq
DB search
MWSPGTRMWRAALCCMLLETFVHTARGLNVCVSGSATSCEECLLIHPSCAWCAQEEFGRG
RTLTSRCDYSQNLQKRGCEARFVEYPTSSISVLQNVPLSSKGSGLTQYGVVQIMPQKISL
SLRPGDQTWFGLQVRQVEDYPVDLYYLMDLSLSMKDDLDTIRNLGTKLALEMSKLTSNFR
LGFGSFVDKNMSPFSYTASKYQENPCNGYKLFPNCVPTFGFRHILSLTDKVDRFNEEVQK
QMVSRNRDAPEGGFDAILQAAVCKEEIGWRKEAYHLLVFATDVSPPRSGRQAGRPRPAAR
RSGKINWPCRDNGLQSAKDAAERLHGCCMQGHYFTCGATPQAIGESQASASSVDLSFHTM
LRLDSRTERKLRFLMSELTQRHPDVERQRIVDALMELKAEHQGVLSGLPLRTIREMTSEL
LTTPASDASQELRIETRIWFQSTDKHAEWHHVEPGDADVATALCCMLLETFVHTARAGSR
DEQAHQQLQVGFGSLWTKTCPPSPTRIQVQENPCNGYKLFPNCVPTFGFRHILSLTDKVD
RFNEEVQKQMVSRNRDAPEGGFDAILQAAVCKEEIGWRKEAYHLLVFATDDVPHLALDGR
LGGLVQPHDGQCHLNDKNEYSASEKMDYPSLALLGEKLAENNIFLIFAVTKRLYVIYKDF
TALIPGTTVEILDQDSKNVIQLIIAAYNNIRSKVELSVWDHPEDISLSFTATCQDGKPLP
GLRKCADLKIGDTVSFNVSVEARSCPPRGTDQSFTIKPVGFKERLEVSVDYQCDCGCSRT
AQTNSSICSSIGTYNCGTCHCEPGYLGARCECQEGDASSMYISACREAEGKQICSGRGEC
SCNQCLCYESEFGKIYGSYCECDDFSCARHKGVLCSGHGECHCGECKCHAGYVGDNCNCS
TETSSCIADDGQMCSGRGNCVCGRCQCTEPGAFGDTCEKCPTCPDACGTKRGGIECGFSL
GGLQTHNASAVQGMKSSTVEKLKTEEPGAVLCLYKTDNDCVMKFTYSEHASGQSVLTALK
EPECGGGPDALMVLLAVVGSILLVGVVLLAAWKLVITIHDRREFSRFQSARSRARYEMAS
NPLYKQPVSTHFVETDFNMYGKSFNGGVH
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgtggagcccggggacgcggatgtggcgagcggctctgtgctgcatgcttctggaaaca
tttgtgcacactgcgagaggtcttaacgtgtgtgtgagtggcagcgcgacctcctgtgaa
gaatgccttctgattcaccccagttgcgcctggtgcgcacaagaggagtttgggagggga
cggactctgacatcccgatgtgattatagtcaaaacctgcagaagaggggctgcgaggcg
cggttcgttgagtaccccaccagcagcatctctgtcctgcagaacgtccccctgagttct
aaagggtccgggttgacgcagtatggcgtcgtccagatcatgcctcagaagatctctctc
agcctgcggccaggagaccagacgtggtttgggctgcaagtgcggcaggtggaggactac
ccagtggacctctactacctgatggacctctctctttccatgaaagacgatctggacacc
atccgtaacttgggtaccaagctggctctagagatgagcaagctcaccagcaacttcagg
ctgggctttggctcctttgtggacaaaaacatgtcccccttctcctacaccgcatccaag
tatcaggagaatccatgcaatggatacaaactgttccccaactgtgtccccaccttcggt
ttccgccacatcctctcactgacggataaagtggaccgttttaacgaggaggtgcagaag
cagatggtatctcgcaaccgggacgcgccggagggcggatttgacgccatcctgcaggct
gctgtttgtaaggaggagatcggctggagaaaggaggcctaccacctgctggtgttcgcc
accgacgtgtccccccctcgctctggacggcaggctgggaggcctcgtccagccgcacga
cgttcaggaaagatcaattggccatgtcgtgataatggactccaatctgccaaggatgca
gcagagaggctgcatggctgctgcatgcaaggccattactttacatgtggagccacccca
caagccattggtgagagccaggcctcggcctcatcagtggatctgagttttcacaccatg
ctgagactggactcacgcactgaaagaaagcttcgattcctgatgtcggagctgacgcag
cgccacccggacgtggaaaggcagcggattgtggatgcgctgatggagctgaaggccgag
caccagggcgtcctcagcggcctgcccctcaggaccatccgggagatgacgtccgagctt
ctgaccacgccggcgagcgacgcatcacaggaactgcgaatagagactcgaatctggttc
cagagcactgataaacacgccgagtggcaccatgtggagcccggggacgcggatgtggcg
acggctctgtgctgcatgcttctggaaacatttgtgcacactgcgagagctggctctaga
gatgagcaagctcaccagcaacttcaggtgggctttggctccttgtggacaaaaacatgt
cccccttctcctacacgcatccaagtacaggagaatccatgcaatggatacaaactgttc
cccaactgtgtccccaccttcggtttccgccacatcctctcactgacggataaagtggac
cgttttaacgaggaggtgcagaagcagatggtatctcgcaaccgggacgcgccggagggc
ggatttgacgccatcctgcaggctgctgtttgtaaggaggagatcggctggagaaaggag
gcctaccacctgctggtgttcgccaccgacgatgtcccccacctcgctctggacggcagg
ctgggaggcctcgtccagccgcacgacggccagtgccacctcaacgataagaacgagtac
agcgcttctgaaaagatggactacccctctctggctctcctgggggagaaactggcagaa
aacaacatctttctcatctttgcagtgacaaaacggctgtacgttatttataaggatttc
actgcactcatacctggaactacagtcgaaatcctggaccaggactccaagaatgtaatc
cagctgatcatcgcagcgtacaataacatccgctccaaagtggagctgtccgtgtgggat
cacccagaggacatcagcctctccttcaccgccacctgccaggatggaaagccgctgcca
ggcctcaggaagtgtgccgacttgaagataggagacactgtgtcgttcaacgtgagtgtg
gaggcgaggagctgccccccccgcggcaccgaccagagcttcaccatcaagccggtgggc
ttcaaagagcgtttggaggtgtcggtggattaccagtgtgactgcggctgcagccggacc
gcacagaccaacagcagcatctgcagctccataggtacgtataactgtgggacttgtcac
tgtgagccgggctacctgggcgcccgctgcgagtgccaggagggcgacgccagcagcatg
tacatcagcgcctgcagggaagccgagggcaagcagatctgcagcgggcgaggagagtgc
agctgcaaccagtgtctctgctacgagtcggagttcggcaagatctacggcagctactgc
gagtgtgacgacttctcctgtgccagacacaaaggcgtcctctgctcaggtcacggagag
tgtcactgcggggagtgtaagtgccacgccggttacgttggcgacaactgcaactgctcc
acagagacgtcgtcctgcatcgcagacgacgggcagatgtgcagcgggcgagggaactgt
gtctgcggccgctgtcagtgcaccgagccgggagccttcggagacacctgtgagaagtgt
cccacctgccccgatgcctgtggcactaaaaggggaggtatcgagtgcggcttttcactc
ggcggcttgcagacacacaacgccagcgctgtgcaaggcatgaaatcatcaacagtggag
aaactcaaaacggaggagccaggcgctgtgctttgtctgtacaagaccgataacgattgt
gtcatgaagttcacgtactccgagcacgccagtggacaatccgtcctcacggctctaaaa
gaaccagagtgtggtggtgggcccgacgctctgatggtgctgctggcggtggtcggcagc
atcctgctggtgggcgtggtgctgctcgctgcctggaagttggtcatcaccattcatgac
cggagggagttttcgcgcttccagagtgcacgctcacgagcccgatacgagatggcctcc
aaccctctgtacaagcagcctgtctctacacatttcgtagaaaccgatttcaacatgtac
gggaagtccttcaacgggggggtccactga
DBGET
integrated database retrieval system
