Etheostoma spectabile (orangethroat darter): 116690257
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Entry
116690257 CDS
T08457
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116690257
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116690257
03036 Chromosome and associated proteins [BR:
esp03036
]
116690257
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116690257
Coactivators
SAGA/TFTC/STAGA complex
116690257
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116690257
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Motif
Other DBs
NCBI-GeneID:
116690257
NCBI-ProteinID:
XP_032372964
LinkDB
All DBs
Position
1:27318350..27404982
Genome browser
AA seq
1083 aa
AA seq
DB search
MAGASDPLEDMLFSEVDEKAVSDLVGSLESQLADQSNPAGKTDENGGAGSVAPANHHLGK
TLPAPVGTTTLEQQQQGRRYKPEMRQEIKSKDVSLDKSVTSPSLGCTPSFGEPPTTSAAC
VNATSSGSQSHGASITTLTASGVSTLAPTPASISTTSSRGCKVSPGTGETSTEANPPRKR
ITTPRRSASARIKSLNGAAVTTRRNSNTAVADNVNVSSVDTTATDVTPNSTSPGTSSINT
STFTLSNANLPVGQSAIALDRGTPTIALHRLPSHIVASIAQNGNGTNVSALVQQVARIGP
ITSSTSQGDHSKTVTETGASKTDDCQSKIVMSSQSGNVNSVISTVPSSPSVVTPTTTTAS
ATTTTTVTQPLSTTTAAVSVTGVTASSVCGTGQTTSVTTTISMVRPTAPSPTPAVTTSAQ
SQPRPGLTAPQRIVAPQLIVRPPQQQTTIQLPPGFTIPPGMVLVRTELGQLVMVPQQALA
QAQAQAQAQAQAQNQNNISPRPATPTTGASFRVTTPQSPVTSQTTRQCALTPAKMVPSPS
PTPSSPALQTSSSASSSSSSSSCPALRPKGPVAPAVAVTAPQQTPVVMAPQAPAQAASQP
AQPPQTGITANPGGPVVSQEMQENVKKCKNFLATLIKLASHNSPSPETSKNVKSLVQDLL
DAKIEPEEFTSRLQTELKSSPQPYLVPFLKKSLPALRLSLLNSQQSPTPLPQQGVKPAPG
GPPPAIVAGPAVRIRHPNSVSITTGASALPAGTLGHAAGMGIKTAGAVSGQVRMPVVITQ
SVRAQGTMGKGGIIQAGKCPVGFSVHYSGNQKNKLNDPGGGSFRDDDDINDVASMAGVNL
NEESARILATNSELVGTHIRSCKDEAFLHPGLLHRRILETAKKFGVTEVPMEAVTFISHA
TQSRLRTVVEKVSTIAQHRLDSCKDDECYEQSADVRSQLRFFEQLERMEKQRKDEQEREI
LLKAAKSRSRQEDPEQARLKQKAKEMQQQELAQMRQRDANLTALAAIGPRKKRKMDSPGN
TPSGTEVSGSTAGSPASSSTPSTSSRQYTRQRITRVNLRDLIFYMEQERETAHSLLLYRA
LLK
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcctccgaccccctggaagatatgctcttttcagaggtggatgaaaaagct
gtgagcgacctagtgggctcgttggagtcacagcttgctgaccaaagcaaccccgcaggt
aaaacagacgaaaacggaggcgctggctcagtggcccccgctaaccatcacttaggaaaa
acgctgccagctccagtgggcaccacaacactagaacaacaacaacaaggacggcgttat
aaacctgaaatgcgccaggagataaagtctaaagacgttagcctggataaaagtgtcaca
tctccttctctgggctgtaccccttcttttggcgagcctcccaccacttcggctgcttgt
gtgaacgccaccagcagcggttcgcaatcacatggagcatccatcacaacactgactgca
tctggtgtgtcaactttggctccaacgccagccagcatcagcaccacatccagccggggg
tgtaaggttagccccgggacaggtgagacgtcgacagaagctaacccaccgagaaaacgc
ataaccacgccaaggaggagcgcttcggctcggataaagagtttgaacggcgcagctgta
acgactagaaggaacagcaacacagcggtggctgacaacgttaacgttagttctgtagat
actactgcaactgacgttacaccaaactctacttccccaggcacatcttctattaacact
tcgactttcaccctatcaaacgctaacctccccgtagggcagtcggctattgctctggac
cgggggactcctaccattgctttacatagacttccgagtcatattgtagcgagtatagcc
caaaacggaaacgggaccaatgtttcggccttggtccagcaggtggctcgcatcggaccc
atcacctcctcaacttcacagggggaccacagcaaaacggtcacagaaactggggcttcc
aaaacagacgattgtcagtccaaaattgtaatgtcaagccagtctggtaatgttaactct
gtaataagcactgttccctcttcgccttctgttgtcacaccaacaacaactacagcatca
gctacaacaaccacaacagtaacccagcctttgagcactactacagctgctgttagtgtt
acaggggtgacagcgagttctgtatgtggaactggtcaaactacatcagtgactaccact
attagcatggtcaggcccacagccccctccccaacacctgctgtgaccacctccgcacag
tctcagccccgtcctggacttacagcgcctcaaaggatcgtagccccccagctgattgtc
agaccacctcagcagcagacgaccatacagctgccccctgggtttaccatcccaccgggg
atggtgttggtacgcacggagttgggccagctagtgatggttccccagcaggctttggct
caggctcaggctcaagctcaggctcaggctcaggctcagaaccagaacaacatctctcca
cgaccagccacccccacaacaggagcatctttcagagtaacaactccgcagtctcctgtg
acctctcagaccaccaggcagtgtgctttgaccccggccaagatggtaccgtctccctct
cctactccttccagccctgccctccagacttcctcttctgcttcctcctcctcctcctct
tcctcctgtcctgcactccgcccaaagggccccgtggcaccggccgtggctgtgacggct
ccgcagcagacccctgtggttatggccccccaggccccggcccaggctgcctcccagcca
gcgcagcctccgcagacgggcatcaccgcgaaccccggaggtcctgtcgtgtcccaggaa
atgcaagagaatgtcaagaagtgtaagaatttcctggccacacttatcaagctggcgtct
cacaactctccgtcacctgagacttccaagaacgtcaaatctctggttcaggacctgctg
gatgcaaagattgaaccggaggagttcaccagccggctgcagactgagctcaaatcgtct
ccacagccttacctggtgccttttctcaagaagagcctcccggccctgaggctatctttg
ctgaatagtcagcaatccccaaccccgctcccgcagcagggagtcaaaccagcacccggc
ggcccccctcctgccattgtggctgggccagctgtccgcatacgccaccctaacagtgtc
agcatcactacgggtgctagtgctctgcccgctgggacgctcggacatgcagctggcatg
ggtatcaagacagcaggcgctgtcagtggccaggtccggatgcccgtggtgatcacacag
tctgtcagagcgcaaggcacaatggggaaaggaggcatcatccaagcaggcaaatgtccc
gtgggcttttctgttcactactctgggaatcagaaaaacaagctcaacgaccccggagga
ggttctttcagggatgatgatgacatcaatgacgtagcctccatggccggggtgaacctt
aatgaggagagcgcaagaatactcgccaccaactctgaactagtgggaacgcacatccgc
tcatgtaaagacgaggcctttctccatccgggacttctccatcgacgaattctggaaaca
gctaagaagtttggcgttacagaggtccctatggaggcggttacgttcatctcacatgcc
acccagtcacgacttcgaactgttgtagaaaaggtttctaccattgcacagcaccgactg
gactcttgtaaggatgacgagtgctacgagcagtcggcagacgttcgctctcagcttcga
ttttttgagcagctggagagaatggagaagcagaggaaggacgagcaagagagagagatc
ctgttgaaagccgctaaaagtcgctccaggcaagaggacccagagcaagctcgactgaaa
cagaaagctaaggagatgcaacaacaggaactggcacagatgaggcagcgagatgccaac
cttacagcactagccgccatcggaccccgcaaaaaacgtaaaatggattcaccagggaac
accccatcagggacagaggtttcaggcagtacggcgggctccccggccagctcctccacc
ccgtccacctcatcacgccagtacacacggcaacgcatcactcgcgtcaacctcagggac
ttaattttctacatggagcaggagagagagaccgcccactccctcctcctttaccgcgcc
ctgctcaagtag
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integrated database retrieval system
