Etheostoma spectabile (orangethroat darter): 116690358
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Entry
116690358 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: 60 kDa heat shock protein, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
116690358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116690358
03110 Chaperones and folding catalysts [BR:
esp03110
]
116690358
03029 Mitochondrial biogenesis [BR:
esp03029
]
116690358
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
esp04147
]
116690358
Enzymes [BR:
esp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
116690358
Messenger RNA biogenesis [BR:
esp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
116690358
Chaperones and folding catalysts [BR:
esp03110
]
Heat shock proteins
HSP60 / Chaperonin
116690358
Mitochondrial biogenesis [BR:
esp03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
116690358
Exosome [BR:
esp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116690358
Exosomal proteins of other body fluids (saliva and urine)
116690358
Exosomal proteins of breast cancer cells
116690358
Exosomal proteins of colorectal cancer cells
116690358
Exosomal proteins of bladder cancer cells
116690358
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
116690358
NCBI-ProteinID:
XP_032373134
LinkDB
All DBs
Position
5:complement(35960506..35970861)
Genome browser
AA seq
574 aa
AA seq
DB search
MFRLPTIMKQVRPVCRALAPHLTRAYAKDVKFGADARALMLQGVDLLADAVAVTMGPKGR
NVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDTISKGANPVEIRRGVMMAVETVIXELKNLSKPVTTPEEMHRVATISANGDV
EIGTLIXHAMKKVGRKGVITVKDGKTLHDELEIIEGMKFDRGYISPYFINTAKGQKVEFQ
DAYLLLSEKKISSVQSIVPALELANQHRNRVHVAXDVDGEALSTLVLNRCVCGLQVVAVK
APGFGDNRKNQLRDMAIATGGTVFGDDAVGLALEDIQAHDFGKIGEVQITKDDTLLLRGG
GSPAEVDKRAAEIAELLESSTSDYEKEKLNERLAKLSDGVAVLKIGGTSDVEVNEKKDRV
TDALNATRAAVEEGIVPGGGCALLRCIPSLDAVKTVNADQKIGVEIIRRALRIPAMTIAK
NAGVEGSLVVETILRGSAELGYDAMLGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLST
AECVVTELPKEEKEMPAGGMGGMGGMGGMGGMGF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgtctacccaccatcatgaagcaggtgaggcccgtgtgcagggcgctggcgcct
cacctcacacgagcctacgccaaggatgtgaagtttggagcggacgctcgcgccctgatg
ctgcagggggtggacctcctggctgacgccgtggcggtcaccatgggcccaaagggtcgc
aacgtcatcatcgagcagagctggggcagccccaaggtcaccaaggacggcgtgacggtg
gccaagagcatcgacctgaaggacaagtacaagaacatcggcgccaagctggtgcaggac
gtggccaacaacaccaacgaggaggccggcgacggcaccaccaccgccacggtgctggcc
cgcgccatcgccaaggagggcttcgacaccatcagcaagggcgccaaccccgtggagatc
cgccggggggtcatgatggccgtggaaaccgtcatcnaggagctgaagaacctctccaag
ccggtcacgacccccgaggagatgcacagggtcgctaccatctcagccaatggagacgtg
gagattggtacgctaatannccacgccatgaagaaagtcggccgcaagggagtcatcact
gtcaaggatgggaagaccctgcacgatgagctggagatcatcgaggggatgaagttcgac
cgcggttacatctccccttacttcatcaacactgccaaaggtcagaaggtggagttccag
gacgcctacctgctgctgagcgagaagaagatctccagcgtccagagcatcgtgccggcc
ctggagctcgccaaccagcaccgaaaccgcgttcatgtggctnaggacgtggacggggag
gccctcagcaccctggtcctcaacaggtgtgtgtgtggtctccaggtggtggctgttaaa
gctccaggattcggagacaacaggaagaatcagctgagagacatggccatcgccaccggg
ggcactgtgttcggagacgacgcagtaggtctggctcttgaagacatccaggctcacgac
tttggtaagatcggtgaggtgcagattaccaaagatgacaccctgctgctgagggggggc
ggcagccccgccgaggtcgacaagcgtgcagcggagatcgccgagctgctggagagctcc
accagcgactacgagaaggagaaactcaacgagaggctggccaagctgtccgacggagtg
gcggtcctcaagatcggaggtaccagtgacgtggaggtgaacgagaagaaggaccgcgtg
acggacgctctgaacgccacgcgggccgcggtggaggagggcatcgtgccgggtggaggc
tgcgccctgctgcgctgcatccccagcctcgacgccgtcaaaacggtcaatgccgaccag
aagattggcgtggagatcatcagacgagcgctccgtatccccgccatgaccatcgctaaa
aatgcgggcgtggagggttcgctggtggtggagacgatcctgcgggggtcggctgagctg
ggctacgacgccatgctgggagagtacgtcaacatggtggagaagggcatcatcgacccc
accaaggtggtgaggacggcgctgatggacgctgcaggagtcgcctccctgctctccacg
gctgagtgcgtcgtcacggagctacccaaggaggagaaggagatgccggcgggaggcatg
ggcggcatgggggggatggggggcatgggaggcatgggtttctaa
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