Etheostoma spectabile (orangethroat darter): 116690374
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Entry
116690374 CDS
T08457
Symbol
lrrc49
Name
(RefSeq) leucine-rich repeat-containing protein 49 isoform X1
KO
K16606
leucine-rich repeat-containing protein 49
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
esp03037
]
116690374 (lrrc49)
04812 Cytoskeleton proteins [BR:
esp04812
]
116690374 (lrrc49)
Cilium and associated proteins [BR:
esp03037
]
Primary cilia and associated proteins
Tubulin polyglutamylase and associated proteins
116690374 (lrrc49)
Cytoskeleton proteins [BR:
esp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Tubulin modification proteins
Tubulin polyglutamylase complex components
116690374 (lrrc49)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_9
LRR_4
LRR_8
LRR_14
LRR_NXF1-5
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
116690374
NCBI-ProteinID:
XP_032373177
LinkDB
All DBs
Position
1:complement(27771888..27807703)
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AA seq
808 aa
AA seq
DB search
MELTESKTMRSQKHNSVNDRWVCLTPMVNSCKLHLTTDKSIERAQRMTDSQDIVNEKNTN
TGQTINHSNPENRLHACRRLAQTPLVPSFARYSTDSPVHYLVPLACGAQSGLDAVSHVTQ
DASNKSRRPTNGAGATYYRNALNIAKQSGGSGGYKYNAVPGIPFTRLPCDSFASTVQQID
LDRRCLEECPQLGPMDELQLLNLQHNLITRIHHLSHLQQLVFLNLYDNHISEMTGIEYLS
SLRILMLGKNRIHKICCLESLSNLTILDLHDNQICRIENVSHLIKLRVLNLAGNNISKVE
NMQGLNCLTELNLRNNCISIVTEVYRLPCLQRLFLSCNNITSFDQLACLGESHSLSELTL
DGNPVALETWYKQAVLRCVLHLRQLDMKRITDEDRRMAGVQARKEEEKKRESHKQTIHKK
RRLAIRNAAQQWEGVRSCLELPPANGAKEEVSPESSPAHSPAQTNGLAQEPSPDEPRRVS
PGSGPERPSGGTESRLRTNSRPNSPRDPKLVEAGSGSIQSLSLSDSHLAELDGDTLRLFG
TGALEALERGWGVQTAGAVTVITFRYINFDAIVPTLPRIRIKFPNLSHLIFLETNISRLP
QLAALTQVRRLDQLTIHPEGNPVVSLALWRSFLIYRLHHFNLQKINGQEVTMNDVIAAVR
VFGTLGHIAATETPRCRLLLLLEESRKRQLQFLLEGRGRRAGLSPEELRDNGKLLGEGLS
RALFNYPSRDCSAESPEEGTVESSERAAMIEQYLQELVQRASDTNLKGEALHKLWPSMFA
EMVRDCVLEMRDRAAFRQASLARISETK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggaactaactgagagcaaaacgatgcgatctcagaaacacaacagtgtcaacgataga
tgggtgtgtctcacccccatggtcaacagctgcaaattgcaccttacaactgacaagtca
atagagagagcccagaggatgactgactcgcaagatattgtaaacgaaaaaaatacgaat
accggccaaacaattaatcattctaacccagaaaacaggttgcatgcttgcagaagactt
gcccagacacctctggtgccatcatttgcccgttactcaacagattcccctgtgcattat
ctagttccactagcgtgtggtgcccaaagtggtttggatgcagtatcacatgtaacgcaa
gacgcaagtaacaaatctaggagaccaaccaacggggcaggggccacttactaccgcaat
gcgctaaacattgctaagcaatcaggtggttctggaggatataaatacaatgcagtccct
ggtattcccttcactcgattgccctgtgacagttttgcatccactgttcaacaaattgac
ttggacaggcgctgtctggaggaatgcccccagttgggtcctatggatgaactacagctt
ctcaacctccagcacaatctaatcacaaggatccatcatctgtcacatctgcaacagctt
gttttcctgaacctgtatgacaatcacatttctgaaatgactggtattgaatatctaagc
tctcttaggatccttatgctggggaagaacagaatccataaaatatgctgcttggaaagc
ctgtccaatctgactatcctggatctgcatgacaatcagatctgcaggatagaaaacgtg
tcccacctaatcaagctgcgagtgttgaacctggcaggaaacaacatatccaaagtggaa
aacatgcaaggcctcaactgtttgactgaactcaacctacgaaacaactgcatatctatt
gtgactgaggtgtaccgcctgccctgcttgcagcgcctctttctcagctgcaacaacatc
accagttttgatcagctagcctgccttggagagtcacactccctttctgagctcaccctg
gatgggaatcctgtagccctggagacatggtacaagcaggccgtcctgcgctgtgtgctt
catctgagacagctggacatgaagcgcatcacagacgaggatcggcgcatggctggtgta
caggctcgaaaagaggaggagaagaagagggagagtcacaagcagactattcataagaag
cggcgtctggcgatccgtaatgcagcgcagcagtgggagggcgtcagatcgtgcctggag
ctgccacccgcaaatggtgctaaagaagaagtcagtccagagagcagccctgcccacagc
cccgcccagaccaatggccttgcacaggaaccatctccagatgaacccaggcgggtaagt
ccaggttcaggaccagagagaccatcagggggaacggagagcagacttcgcactaatagc
cgtccaaacagcccacgagatcccaagcttgtggaggcagggagcggcagtattcagagc
ttgtccctctctgacagtcacctggcggagctggatggtgacacactgcggttatttgga
accggagccctggaggccctggagaggggctggggagttcagactgctggtgctgtcact
gtaataaccttccgctacatcaactttgacgccattgtaccaacactgccgcgaataagg
atcaagttccccaatctatcgcacctgatcttcttggaaaccaacatcagccgtctgccc
cagctggctgccttgactcaggtgaggcgtctggaccagctgaccatccacccagagggc
aacccagtggtcagtctggctctttggcgctccttcctcatctaccgcctccaccacttc
aacctgcagaagatcaacggccaagaggtcactatgaatgatgtgatcgctgcagtgcgt
gtgtttgggacactgggtcatatagcagccaccgaaactccacgttgccggctcctcctg
ctgctagaggaatccaggaagcgtcagctacaattcctgttagagggacgtggcaggcgg
gcaggactgagtccagaggagctgcgagataatgggaagctcctgggagaaggcctgagc
agggcgctgttcaactacccaagcagagactgcagtgcagagagccctgaggagggcact
gtggagtcatcggaacgtgctgctatgatagagcagtatctgcaggagttggtccaaagg
gcatcagacaccaatctgaagggtgaagcactacacaagctctggccctccatgtttgct
gagatggtgagggactgtgtattggagatgagggaccgagcggccttccgccaagccagc
cttgcgaggatctctgagaccaagtga
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