Etheostoma spectabile (orangethroat darter): 116690403
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Entry
116690403 CDS
T08457
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha isoform X1
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116690403 (hnf1a)
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
116690403 (hnf1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
Motif
Other DBs
NCBI-GeneID:
116690403
NCBI-ProteinID:
XP_032373259
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Position
5:complement(22689412..22697217)
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AA seq
575 aa
AA seq
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MEERIEERPGAAMAKPSRLTALQEQLIWALLGSGLSRDILVQAMGELERDRASAGAERGE
RGDGESSEEGEMDFPPPIFRELEKLHPEEAAKLRAEVDHLLQEDPWHVAKMVKSYMQQHN
LPQREVVESTGLNQSHLSQHLNKGTPMKNQKRASLYTWYVKKRGEISQQFTNAKHGLGSA
EEQGEESKKGRRNRFKWGPASLQILFHAYERQKNPSKEEREGLVEDCNRAECHQRGVSPS
QLAGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTPFTNQSASSSHPNLPPSPEHVYWG
LTSCFPGVKYSQQILCESVSSARGSTGERVGRLVVSPIQLEPSHTLLETHNHKLVSGGGP
LPPVSTLTSLHSLSASPASSQGLIMASLPSVMSLGESSLLIGLASTQSQTVPVINNVGGG
FTTLQPISFQQQLHGSPQQPLSHHLQSHMAASPFMATMAQLPCHMYNNKLDSPQYHSSSL
LSQAMFIADSGGLGTLTSLTAVRQNLTADPEEETDRPLQEDTLHLQPHTPVPASSESLQL
YPAPQTTESHQSHLLSPSPTDISTYIPTQMVSTAQ
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaggatagaggagaggcctggggcagccatggcgaagccgagccgtttgact
gcccttcaggagcagctgatctgggccttgctgggatctggactgtcccgggacatcctg
gtccaagccatgggggaactggagcgagacagggcaagtgctggcgccgagaggggagag
agaggggacggagagagctctgaggagggagaaatggatttcccaccgcctatattccga
gagctggagaagcttcacccagaggaggcggccaaactgagggctgaagttgaccatcta
ctgcaggaggacccctggcacgttgctaaaatggttaaaagctacatgcagcagcacaac
ctccctcagagagaggtggtggagtccaccggactcaaccagtcccatctctcccagcac
ctcaacaaaggcacacccatgaagaaccaaaagagagcgtctctgtacacttggtacgtc
aagaagcgaggcgagatcagccagcaatttaccaacgccaaacatggccttggttctgcg
gaagagcaaggagaggagtctaagaaaggacggaggaacaggttcaaatggggtccagca
tccctgcagatcctcttccacgcctacgaacgacagaagaaccctagcaaggaggagaga
gaggggttagtggaggattgtaacagggcagagtgtcatcagaggggggtgtctccctcc
cagcttgctggcctgggctccaacctggttaccgaggtccgcgtgtacaactggttcgcc
aaccgtcgcaaagaggaggccttccgtcacaaactggctctcgacacaccttttaccaac
caatctgcctcctcatctcaccccaaccttccaccgagccctgagcatgtgtattggggc
ctgacatcttgttttccaggggtgaaatacagccagcagatcctttgcgaaagcgtgagc
tcagccagaggaagcacaggagagagagtgggacgtctggtggtcagccccattcaactg
gagcccagccacacacttctcgagacacataaccataagctggtgtccggcggtggccca
ctgcccccagtaagcactctgacctcgctgcacagtctgtctgcgtcccctgcctcctca
cagggcctcatcatggcctccctgcccagcgtcatgagcctgggggagtcctcgcttctc
attggtttagcctccacgcagtctcagaccgtgcctgttatcaacaatgtggggggcggt
ttcaccactctccagccaatctcattccagcagcagctgcacggctctccccagcagcca
ttatcacaccatctccagagtcatatggcagccagtcccttcatggcaaccatggcgcag
ctgccatgtcacatgtacaacaacaagttggattcaccccagtaccattcgtctagtctg
ctgtctcaagccatgttcatcgctgacagtgggggcctggggacgctgaccagcctcact
gctgtcagacagaatctaacagcagatcctgaggaagagacggatcgacctctgcaagaa
gacactctccacctgcagccgcacacacctgtgccagcttcctccgagagcctccagctg
tatcctgctcctcagaccacagaaagtcatcagtctcatctgctctccccttcaccaaca
gacatcagcacttacatccctacacaaatggtctctacggcacagtag
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