Etheostoma spectabile (orangethroat darter): 116690405
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Entry
116690405 CDS
T08457
Symbol
msi1
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116690405 (msi1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
esp03019
]
116690405 (msi1)
Messenger RNA biogenesis [BR:
esp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
116690405 (msi1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
NID
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
116690405
NCBI-ProteinID:
XP_032373261
LinkDB
All DBs
Position
5:22701910..22721936
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AA seq
349 aa
AA seq
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METEGSQSSLSTTDSPHDPCKMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRS
RGFGFVTFVDQAGVDKVLAQTRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVNT
TIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYTSRSYAGITPGYT
YQFPEFHLERTPLLTSPHPPELTAIPLTAYGPMAAAAAAAAVVRGSNQSRAAGFLGTSSP
GPMADLYGTAGQESAVSSYLSAASPAPSTGFSHSLGGPLIATAFTNGYH
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggagacggaagggagccagagcagtctgtccaccacggactcccctcacgatccctgc
aaaatgttcataggtggactcagctggcaaacaacacaagagggcttgaaggagtacttc
tgcaagtacggcgaggtgaaggagtgtatggtgatgcgagatccggttactaagcgctcg
agagggtttggattcgtcacctttgttgatcaggccggcgtggataaagttttggcccaa
accaggcacgaattggactcaaaaacaatcgacccaaaggttgcatttcctcgcagagct
cagcccaagttagtgacacgaaccaagaaaatctttgtgggaggcctgtcagtgaacaca
accatcgaggacgtgaaacagtacttcgaccagtttgggaaggtcgacgatgccatgctc
atgttcgacaagaccaccaacagacacagagggtttggctttgtgacgtttgagaatgag
gatgtggtggagaaagtctgcgagattcacttccacgagatcaacaacaaaatggtggag
tgtaagaaagctcagcccaaggaggtgatgtctcccacgggctcagccagggggcgctct
cgcgtgatgccctatgggatggacgctttcatgctgggcattggtatgctaggttaccca
ggcttccagacagccacctacaccagtcgaagctatgctggcatcactcctggatatacc
taccaattccccgagttccacttagagaggactccccttctgacttcaccccacccccct
gagctcacagccattcctctgacagcatatggaccaatggcagcagcagcagcggcagca
gcagtagttagaggctccaaccagtctcgcgcagctgggttcttaggtacgagcagcccg
ggcccgatggcggacctttatgggacagccggtcaagagtcggctgtcagcagttacctc
agcgctgcaagccccgccccaagcactggattcagccacagtctggggggccctttgatc
gccacggccttcactaacggctatcactga
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