Etheostoma spectabile (orangethroat darter): 116690503
Help
Entry
116690503 CDS
T08457
Name
(RefSeq) leucine-rich repeat-containing protein 4C-like
KO
K07523
netrin-G1 ligand
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116690503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
V-set
ig
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
116690503
NCBI-ProteinID:
XP_032373403
LinkDB
All DBs
Position
1:complement(11568997..11614598)
Genome browser
AA seq
631 aa
AA seq
DB search
MLNTMISSLQRQTMRGRRLKGALSNPLFVLLLALQILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLASLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQLSVVKPSSF
LGLVNLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRLERVHLH
HNPWNCNCDILWLSWWLKEAVPANTSCCARCHSPAVFKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTSSLTSISWLTPNGSLVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETIETPGDDSQTPLPPFGWVS
SSTTKGTPVSTRTTERTYTIPVLDLDGEGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDSDGPASSMEVITVEEELAGVAAMERHLTLPPLEHYNHYNTYKNTYHH
APMLSTIHSSTTQEPLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacacaatgatttcttccctccagcgccagacaatgagaggtcgtaggctgaag
ggggcgctgtccaaccccctctttgtgctgcttttggccctccagatcctggtggtggct
gggctggttcgcgctcagacctgtccttctgtctgctcatgcagcaaccagttcagcaaa
gtgatatgcacccgacgcagtctgcgggacgtcccagatggcatttccaccaacactcgc
tacctgaacctccaggacaacctcatccaggtcatcaaggtggacagtttcaaacatctg
cgccatctggagatcctgcagctgagcaagaaccacatccgcagcattgaaattggcgcc
tttaatggactggccagtctcaacaccttggagctctttgataatcggctcacaacaatc
cccaatggagcatttgagtacttgtctaagctgaaggaattgtggctaaggaacaacccc
atcgaaagtataccatcttatgccttcaaccgggtcccctcgcttcgaaggctggatcta
ggtgagctcaaacgtctctcctacatttctgacggagccttcaaggacttgagcaacctg
cgctacctgaacctgggaatgtgcaacctcaaggagatccccaatatcttacctttggtc
agacttgaagagctagaaatgtcaggaaaccagctctcggttgtcaagcccagctccttt
ttaggtttagtgaacctccaaaagctgtggatgatgcatgcccagatccaaacaatcgag
aggaattcctttgatgatcttcagtcactggtcgagctcaacctagctcacaacaacctt
acctttctaccacatgacctcttcacaccattgcatcgcctggagcgggtccacctccat
cacaacccttggaactgcaactgtgatatcttgtggctcagctggtggctgaaggaggca
gtacctgccaatactagctgctgcgcccgttgccattctcctgcagtctttaaaggtcgc
tacattggggaattggaccacagctatttccagtgtgatgttcctgtcattgtggagcca
cccagtgacttgaatgttacagaaggcatgggtgcagagcttaaatgtcgtaccagctcg
ctgacatccatcagctggcttacaccaaatggctctttggtgacacatggggcttataag
gtgcgtttgtctgtacttaatgatgggacactgaacttcactagcgtcacaatgcaggac
actgggacttacacctgtatggtaagcaacacagcaggcaacatttctgcctccgctgtg
cttaatgtcacttctgtggaaaacagcggagtgacctattttaccacagtcaccgtggag
accattgagactccgggggatgatagccaaacgccacttcccccatttggctgggtctca
tcctctacaacaaaagggactcctgtttcaacacggaccacagagcggacttatacaatt
ccagttcttgatctggatggagagggagccctcaatggtctagatgaggtgatgaaaacc
accaagattatcataggctgcttcgtggccatcacacttatggctgcagttctgctggtt
attttctacaagatgaggaagcaacataaccagcaggattctgatggccctgcctcctcc
atggaggtcattacagttgaagaagagcttgcaggtgtcgctgccatggagagacaccta
accctgccccctctggagcactacaaccactacaacacctacaagaacacttaccaccat
gctcctatgctcagtaccatacacagctcaaccacacaggaacctttactgattcaagcc
tgctcaaaagacaatgtacaagagacccaaatctga
DBGET
integrated database retrieval system
