Etheostoma spectabile (orangethroat darter): 116690589
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Entry
116690589 CDS
T08457
Name
(RefSeq) LOW QUALITY PROTEIN: thrombospondin type-1 domain-containing protein 4-like
KO
K23369
ADAMTS-like protein 4
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
esp04990
]
116690589
Domain-containing proteins not elsewhere classified [BR:
esp04990
]
Thrombospondin domain-containing proteins
ADAMTS-like proteins
116690589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
ADAMTS_spacer1
TSP1_spondin
TSP1_CCN
PLAC
ADAMTS_CR_3
Motif
Other DBs
NCBI-GeneID:
116690589
NCBI-ProteinID:
XP_032373545
LinkDB
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Position
6:10076245..10115586
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AA seq
1185 aa
AA seq
DB search
MRLGLLFRFYVLWGFVVVSTSVTKAAKKKVAGRQSRQVFEAEPVEGXWSVWEEWSDCSQT
CGVGVSQRTRKCLPPPPPPPQTPPLSHSPPNWAGYLPGGIGGPVISPVRPYYPPRHAGQH
QPYQQSPSISTNHNQGLSLYRNTNTGGEGGGGAPVPGQANPIPPFYQPGLSPNNQEHVSI
YRSPYSAPSHSYNQPARTIRRPTNPLAARAAGGGSRRSISPSREGLPARRSSAIRPGQFG
YGRVPFSLPLHRPNRQARHTVNGTDAETSPGLDEDEAENERKEEERTGSDGEDIEAGRRE
EKETTETPAAEEFPTTATATGNTPRHIARPPQTDTEHGRAREQVQSSHSFSRSSSQPNRH
RFDWHSLTAPSPPIHPLSRPNSPALTSPFSSPLHRSSPMHRDRELIPHAPPSSDIYPQQH
PTVPHLGVESGRDGGRGVPQVHRCSGPEKEYRRCFSQVCGGGALDSRAEQCAAFNTQEFM
GRLYNWEPFTEVGVEKQCELTCRPAGYRFYVRQAERVRDGTPCFNFSSNDVCVEGQCLTE
GCDGVLGSGSVIDKCGVCGGRENSCRKVTGSFQNITVPLGYHKILDIPPGATFINITERQ
ASPNYLAMRSGTGASVVNGRWAVDPPGEYKAGGTTFTYTRPRAQMEGEEEKGESLSAPGP
TTTQLQLYIIFHKENPGINYEFYVPVEREVEREKPTEREKETARERPRDREPGRSPLRSP
FTVSVEDPPPAPPPISVPSFPSSSSVFSPPSSDRRIPERSRPRGSAPNRNARIPPRTDLP
PDTQSPFVWSRGGFTECSASCGKGYQNRIILCINRYTDEKVPERKCDSAAKPGPEDEPCN
INPCPPFWEASSWSECSVSCGPGVQQRQLQCRQSFGNRSTMVHPQRCANLTPLESTQKCQ
LGLCSQWEVGSDWSTCSVDCGVGRRTRSVRCISDQGSVVNEKECNSRARPQGSEECNMGP
CVTNWYFTAWSNTCSAQCGPGVQRREVLCLTQGGVREGGGGGDCVGEKPAEMKACNGGPC
VPITMWYSSPWTQCNVPCGNGTQRRDIICVQKMGNDFTFAPASECARLDKPAAVQECEME
ECEPQWFTTEWSACSRSCGKGLQMREVRCLKADKKHNHECDFNTKPEQEQICNTIPCSQQ
VTDENCRDRRHNCVMVVQARLCVYSYYKTACCASCTQSAQRAKRH
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcggtttactattcaggttctatgtgctgtggggctttgtggtggtctcgacc
tccgtgaccaaggcagccaagaagaaggtggcaggcagacagtccagacaggtgtttgag
gcggagcctgtggaggggngttggtctgtctgggaggagtggtccgactgctctcagacc
tgcggcgtgggcgtctcacaaaggaccaggaagtgtttacctcctcctcctccacctccc
caaacccctcccctctcccactctccacctaactgggcaggttatttgcccgggggcatc
ggaggtcctgtcatctcacctgtacgcccctactaccctcctcgtcacgccgggcaacac
cagccttatcaacagtccccgtcgatttccaccaatcacaaccaaggtttgtctctgtat
cggaataccaacacagggggagaaggtggaggaggagctcctgtcccgggacaggcaaat
ccaatccctcctttttaccagccaggactctccccaaacaatcaagaacatgtgtccatt
taccgatcgccctacagcgctccttcacacagctacaaccagccagcacgcacgatcagg
aggccgaccaatccattagcagcaagggctgcaggaggcgggagcagaaggtcgatctcc
cccagtcgggagggtttgcctgcgaggaggtcttccgccattcgtccaggtcagtttggg
tatggcagggtcccgttctctctgcctctgcatcgtcccaaccggcaggctcggcacact
gttaacggcactgatgctgaaacatcacctggactcgatgaagacgaagcagagaatgaa
aggaaagaggaagagaggacgggaagtgatggagaagacatagaggcagggaggcgtgaa
gaaaaggagaccactgagacgcctgctgctgaggagtttcccacgacagccaccgcaact
ggcaatacaccccgccacattgctcgacccccacaaactgatactgagcacgggagggca
agagagcaagtccaatcctcacactccttctcacgctcctcatctcagcccaaccgccac
cggtttgactggcactccctcactgccccatctcctcccatccatcctctctcccgccca
aactcccctgccctcacttcacctttttcctcacctctccaccgctctagccccatgcac
agagacagggagctcatcccacacgccccaccatccagcgacatctacccacaacagcac
cccaccgtcccgcacctgggtgtggaatcaggcagggatggaggaagaggagttcctcag
gtccacagatgctctgggccggagaaggagtaccgtaggtgcttctcgcaggtttgtgga
ggaggtgcgttggactccagagcagagcagtgtgctgcctttaacacccaggagttcatg
ggtcgcctctacaactgggaacctttcactgaggttggtgtggagaaacagtgcgagctg
acctgcagacctgccggctatcgcttctatgtccgccaggccgaacgcgtcagagacggg
accccctgcttcaacttcagctcaaacgacgtgtgtgtagagggacaatgtctgaccgag
ggttgcgatggggtactgggctctggctctgtgattgacaagtgtggagtgtgtggtggg
cgggaaaactcctgtcgaaaggtgacgggaagcttccaaaatatcacggttccccttggt
taccacaagatcctggacatcccgccgggagctacattcattaacatcacagagagacaa
gcaagccctaattacctggccatgaggagtggcacaggggcgtcagtggtgaacgggcgt
tgggctgtggaccctcctggcgagtacaaggcaggagggacaaccttcacttacacccga
cctagagcacagatggagggggaagaagagaaaggcgagtccctcagtgctccaggaccc
accaccacacagttacagctatatatcattttccacaaggagaacccgggcatcaactat
gagttttacgtccccgtggagagggaggtagagagggagaaaccgacagagagagagaag
gagacagccagagagaggccaagggatcgagaaccagggaggtcacctctccgcagtcct
ttcacagtgtcagtagaagaccctcctcctgctcctcctcctatttcggtcccttctttc
ccctcctcctcttctgttttctctcccccctcctcggaccgacggatacctgaaaggtca
cgtcctcgaggctctgcacccaataggaatgctcggatcccccctcgcactgacctgcca
ccagacacacagtcaccatttgtgtggagcagaggaggattcacagagtgttctgcttcc
tgtggcaaaggttatcagaacagaataattctgtgtataaaccgctatacagacgaaaaa
gtcccagagaggaagtgtgactctgcagccaagccgggtcctgaggacgagccgtgtaac
ataaatccctgcccaccgttttgggaggccagttcatggtcagagtgcagtgtgtcctgt
ggccctggggtgcagcagaggcagctccagtgcaggcagagctttgggaaccgttccacc
atggttcacccgcagcgctgtgccaaccttacgccgctagaatccacacagaagtgtcag
ctcggcctctgctcccaatgggaagtcggctcagactggagcacgtgctcagtggactgt
ggagttgggaggaggacgaggagtgtgcgctgcatcagcgatcaaggcagcgtggtgaac
gaaaaggagtgcaactccagggctcgcccacaaggaagtgaggagtgcaacatgggtccc
tgtgtaaccaactggtacttcactgcctggtccaacacttgttcggcacagtgtggcccc
ggggtgcagaggagggaggtgttgtgtctgactcaaggaggggtcagagagggtggagga
ggaggagactgtgttggggaaaaaccggcagagatgaaggcctgcaacgggggtccctgt
gtgccaataaccatgtggtacagcagcccctggacacagtgtaatgtcccctgtgggaat
ggaactcagcgacgagacataatttgtgtccagaagatggggaatgattttactttcgca
ccagccagtgagtgcgctcgtctggacaaacctgccgcggttcaagagtgtgagatggaa
gagtgtgagccacagtggttcacaacagagtggagcgcgtgctcacgttcttgtggaaaa
ggtttacaaatgcgggaggtacgctgtctaaaagcagacaaaaaacacaaccatgaatgt
gatttcaacaccaaacctgaacaggagcaaatctgcaacacaataccctgcagtcaacaa
gtcacagatgaaaactgtcgggacagacgtcacaactgtgtgatggtggttcaggccagg
ctgtgcgtctactcctactacaagactgcctgttgtgcctcgtgtacccaaagtgctcag
cgtgccaagaggcactga
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