Etheostoma spectabile (orangethroat darter): 116690650
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Entry
116690650 CDS
T08457
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116690650 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
esp03041
]
116690650 (prpf3)
Spliceosome [BR:
esp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
116690650 (prpf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
TPX2
DUF4011
Motif
Other DBs
NCBI-GeneID:
116690650
NCBI-ProteinID:
XP_032373628
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All DBs
Position
6:10017634..10029228
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AA seq
702 aa
AA seq
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MSLPKREVEELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTIDQLRPFLDDSAG
GFVERLFEALEESRNARGNKGGGEKHRKRDLKDVFGDEPATGAVREIQESDVTAPKRKRV
PRFEEVEVEEPEVIPGPPSESPGMLTKMQIKQMMEAATKQIEERKKQLSFSSSVPTAPLE
SPPVSRLLGTSTAAAAGGGSSIAPSQAASFMNDAIEKARKAAELQARIQSQLAMKPGILG
ALGNTGPHNLVALANLHAMGIAPPKVEIKEVNKPTPLILDDKGRTVDASGKEVELTHRMP
TLKANIRAVKREQFRQQLKEKPGEDLESTSYFDQRVMITPAQRARRGFKFHDQGRFEKIA
QRIRTKAQLERLQNEIAQAAKKTGIQASTKLALIAPRKEIGEGEVPNIEWWDSYILPYNI
DISPDTKFEELELFGVTNLVEHPAQISPPVDADKPVTLGVYLTKKEQKKLRRQTRREGQK
EVQEKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAAR
KLTAEQRKEKKVKKLKEDLSNGVHIAVYRIRNLQNPAKKFKVEANANQLYLTGTVVLHRD
VNLVVVEGGPKSQKKFKRMMLHRIKWEEHNSKRDDPDGDDDTKRNNKCWLIWEGTAKERS
FGEMKFKQCPTENMAREHFKKHGTEHYWDLALSQSVLDGTDD
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcctaaacgggaggtggaggaactaaggccatgggtggagcggactgtgaag
aaggtgctgggtttctcagagcccacagtggttactgctgctttgcactgtgttggtaaa
ggactggacaaaaggaagacaatagaccagctgcgtcccttccttgatgactctgcggga
ggttttgtggagcgtctttttgaagctttggaggaaagccgcaatgcacgtggcaacaaa
ggaggaggagaaaagcaccgcaagagagacctcaaggatgtgtttggtgatgagcctgca
acaggtgcagtgcgagaaattcaggagtcagatgtgacagcaccaaagaggaaacgggtc
cctcgcttcgaggaggtggaggtggaggagcctgaggtcatacccggacctccatctgag
agccctggcatgctgaccaaaatgcagataaaacagatgatggaagcagccacgaaacaa
attgaagagaggaagaaacaactgagcttttcctcttcagtccctactgcaccactggaa
agccctccagtctcacggcttcttggcacatccactgctgcagctgcaggtggtggctca
tctatcgccccctcccaggctgccagcttcatgaatgatgctatcgagaaggcccgcaag
gccgctgagctacaggcccgcatccagtcccagttagccatgaaacctggtatcctcgga
gccttgggaaacactgggcctcacaacctagtggcactagctaatcttcacgctatggga
attgccccaccaaaagtagaaatcaaggaggtgaacaagccaacacctcttattctagat
gacaaaggaagaactgtggatgccagtggcaaagaggttgaactcacacaccgcatgcca
acactgaaagcaaacatccgagcagtaaagagggagcagtttcgccagcagctgaaggaa
aagcctggagaggacttagagtccacgtcctacttcgaccaacgtgtgatgattacaccg
gctcagcgcgctcgcaggggcttcaagttccatgaccaagggcgctttgagaagattgct
cagagaattagaactaaggcccagttggaaaggttgcagaatgagattgcccaggcagcg
aagaagacgggaatccaagcatccaccaaactggcactgattgcccctaggaaagagatt
ggagaaggggaggtgcccaacattgagtggtgggactcctacattctgccctacaacata
gacatatcacccgacacaaaatttgaagagttggagctctttggtgtgaccaacctggta
gaacaccctgcccaaattagccctccagttgacgcagataagccagtaacgctgggtgta
tacttgacaaagaaagaacagaagaagctgagaagacaaacacgaagggaggggcaaaaa
gaagttcaagagaaggttcgactgggactgatgcctccaccagaacccaaagtacgcatc
tctaacctgatgagagtgctggggacagaggcagttcaagaccccacgaaggtggaagcc
cacgtcagagcccagatggccaagagacagaaggctcatgaggaggcaaatgcagcacgc
aagctcacagcggagcagaggaaagagaagaaagtcaagaagttaaaagaagacctcagt
aatggtgttcacattgcagtgtacaggatccgtaacctgcaaaatcctgcaaagaagttt
aaagtggaggccaatgccaaccagctgtatctgaccggcacagtagttctgcacagagat
gtcaaccttgttgtggtggagggaggtcctaagtcccagaaaaagttcaagaggatgatg
ttgcacagaatcaaatgggaggaacacaacagtaaaagagatgatccagatggtgatgat
gatacaaagaggaacaacaagtgttggctgatttgggaaggcacagctaaagagcgtagt
tttggagagatgaagttcaagcagtgccccacagagaacatggccagagaacacttcaag
aaacacggcacagaacactactgggatctagctctcagccagagtgtgttggacggcaca
gatgactga
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