Etheostoma spectabile (orangethroat darter): 116690717
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Entry
116690717 CDS
T08457
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
esp04131
]
116690717
Membrane trafficking [BR:
esp04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
116690717
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
LRR_1
I-set
Ig_3
ig
Ig_2
LRR_9
V-set
LRRNT
LRR_Zer-1
Ig_5
C2-set_2
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
116690717
NCBI-ProteinID:
XP_032373770
LinkDB
All DBs
Position
6:19795476..19815810
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AA seq
603 aa
AA seq
DB search
MFVESVVRWGAWSILLQFGLGVSAGSCPPRCVCRPEAKEVICSGKHLNSVPEGFSGDARR
LDLSHNKIKTVGRRQFSGLLQLQELDLSDNIISMIEVEAFQGLQNLRTLRIKNNRLKIIP
VGVFSGLSSLRCLDLSQNEILVFLDYTFKELLNLQMLDAEENDLVFISQRAFFGLQNLQE
LNLDRSNLTSVPTEALSQLQSLTRLRMLRLTISTLPNNAFRRLHRLRSLLIANWPSLDTV
ASNSLISLNLTSLVISSCNLSAVPYSAFRHLVYLRYLDLSYNPITVIQGNLLSDLLRLQE
FHLAGGSLLRIEPGAFRGLAYFRMLNVTSNQLTTLEESVFHSVGNLQVLRLDGNPLACDC
RLLWVVRRRLRLNFDGHQPSCLSPDAVRQREFRDFSEKELPRLFTCRPARIMDRRPQEAR
VEEGTTVTFSCKADGDPFPSITWISSHKNVVSPTGRIRVLLNGTLEVRFAQVQDSGTYQC
LAGNAAGNDSLTVGLYVKGLPRNRTIPFFSEEGWVEPSNSQAANSSAQTAKPYPFDAKTL
IIATTMGFLSFLSSVAICFVFMFFWSQSKGQIKHTATIDFVPRSSMGGGGDTGDGGRFTM
KLI
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtggagtcagtcgtccgatggggggcttggagcattctgcttcaatttggactg
ggtgtatctgcaggaagctgtcctccacgctgtgtgtgtcgacctgaggcgaaagaagtg
atctgctccggcaaacatttgaactcagtgccagaaggcttttctggtgatgccaggcgt
ttggatttatcccacaataagattaagactgttgggcgccgccagttctctggtctcctg
caacttcaagagttggatctcagtgataacataatctccatgattgaggtggaggctttc
cagggcctgcagaatctcaggacacttcggattaagaataatcgactcaagattatccca
gttggggtgttttctggcctatctagtctgcgctgtctggatttaagccagaatgagata
ctggtcttcctggactacaccttcaaagaattattgaacctgcaaatgctggacgccgaa
gagaatgacttggtcttcatctcccagcgggctttctttggtctgcagaatctgcaggag
ctcaatttagatcgcagcaacctgacctcggttcctaccgaggcattgtctcaactccag
agcctgacccgtcttcgcatgctacgcctcaccatttctacactccccaacaacgctttc
cgacggctacaccgtcttcgtagcctcctgattgcaaactggccatcattggacactgtg
gctagcaacagcctgatcagtcttaatctgacctcacttgtcatcagtagctgcaaccta
agtgctgttccttactcagcatttcgtcatctggtgtatcttcgctacctggacctgtcc
tataaccccataactgtcatccaaggtaatctgctaagtgacctcctgagactccaagag
ttccacctagcaggggggagcctgctaagaatagagccaggggcctttaggggactggcc
tacttccgcatgctcaatgtgacctccaatcagctcactactttggaggagagcgttttc
cactctgtggggaaccttcaggttttgcggttggatgggaatcccctagcatgtgactgc
cggcttctctgggtggtccgtcgtcgattgcgcttgaactttgatggacatcagccctct
tgtttgtctcctgatgcagtgagacagcgtgaattcagagacttctccgagaaggagctc
ccgagactctttacctgccgccctgcccgcataatggaccgcaggccacaggaggcgaga
gtagaggagggcacgacagttactttctcctgtaaggctgatggggatcctttcccatct
atcacctggatctcatcccataagaatgtggtttcgccaacaggacgaatcagagttttg
ctcaatgggactctagaagtgcgttttgcccaagttcaggacagtggcacatatcagtgc
ctggcgggcaatgcagccggcaatgacagcctgactgttggtctgtacgtgaaggggctc
cctcgtaaccgaaccatacccttcttctcagaggagggctgggtcgagccttcaaactcc
caagctgccaactcctcagctcaaacggccaaaccatacccgtttgacgcaaagaccctg
atcatcgccaccaccatgggcttcctgtctttcctcagctcagtggccatctgctttgtc
ttcatgttcttctggagccagagcaaaggtcagatcaagcacacagcaacaattgacttt
gttccgcggtcttcaatgggtggtggaggggacacaggtgacggtggcaggttcaccatg
aaacttatttaa
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