Etheostoma spectabile (orangethroat darter): 116690779
Help
Entry
116690779 CDS
T08457
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116690779 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
esp01002
]
116690779 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
esp03021
]
116690779 (taf2)
03036 Chromosome and associated proteins [BR:
esp03036
]
116690779 (taf2)
Peptidases and inhibitors [BR:
esp01002
]
Metallo peptidases
Family M1
116690779 (taf2)
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116690779 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
116690779 (taf2)
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
116690779 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1
Peptidase_M1_N
IL2
SR-25
Motif
Other DBs
NCBI-GeneID:
116690779
NCBI-ProteinID:
XP_032373832
LinkDB
All DBs
Position
6:24557144..24585615
Genome browser
AA seq
1213 aa
AA seq
DB search
MNRKKDKGFESPRPFKLTHQVVCINNINFQRKSVIGYVELTIFPTVVNLNRIKLNSKQCR
IYRVRVNELEAPFIYNDPTLEVCHHESKQRNLNYFSSAYTAAVSAVDPDAGHGELVIKVP
PELWKQGDDLKVLKVYIEFSLDQPKGGLHFVVPDVEGSMAERGAHVFSFGYQNSTRFWFP
CVDSYSELCTWKLEFTVDASMVAVSCGDLVETIYTHDMRKKTYHYVLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHSMSYLHEIFEFYEEILTCRYPYSCFKTVFVDE
AYVQLSSYASMSIFSTNLLHSATIIDQTPLTRRCLAQALAQQFFGCFISRMSWADEWVLK
GISGYIYGLYLKKTFGVNEYRHWIKEELDKIVEYELKMGGVLLHPTFIGGKEKDNPTPHL
HFSIKHPHTLSWEYFKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQKYQSH
MWSQMLLSTHAFLKSISNVSGKDIGPLIKQWVDQSSVVKFFGSFAFNRKRNVLELEIRQD
YTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERDVVAQEEAISALEK
FPTPASRLALTDILEQEQCFYKVRMQACFCLAKIANSMVSTWQGPPAMKSLFTRMFCCKS
CPNIVKTNNFISFQSYFLQKTMPVAMALLRDVQNLCPKDVLNFILDLIKYNDNRKNKFSD
NYYRADLIEALTNSLTPAISISNEVRTVDNLNADVRLILEEITRFLNMEKLLPSFRNTIT
VRCLSAIRQLQRNGHIPSDASLFKSYAEYGHFVDVRVAALEALVDYTRVERSSVELQWLL
NMVQNDPAHYVRHKILGMLSKNPPFTKTTDSPLCNEALVDQLWKLMNSGTSHDWRLRCDA
VNLYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKPELDVGPVVDTPASIGIHGVG
MCYAAVDEEPDPISLGVCGVGQPPQGLKRKAETPLGSPPEPGQVLQQQDDDTRGGHFKIR
FNTMEDEDIDMETVHDSQAFIHQHLHLLERPSTPGKEPPSVEQSMLSMPATPVPSFTKET
SSLSSKHSGEHGHHHHHHHHEHKKKKKKHKHKHKHKHKHDSKDKEKDRERDNSHAYSNSP
ASGRSLRSPSLSD
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaagaaagataaaggattcgagagcccgcgcccctttaaattgacccaccag
gtggtgtgcatcaacaacatcaacttccagaggaagtccgtcattggctatgtcgagctg
accattttccccacagtggtcaacctgaacaggatcaagcttaacagtaaacagtgccgc
atctacagggtccgcgtcaatgaactggaagccccattcatttacaatgacccgacactg
gaggtgtgccaccatgagtccaagcagaggaacctcaactatttctccagcgcgtacacc
gcagcagtgagtgctgtggaccctgatgcaggacatggggagctggtcatcaaagttcct
cctgagctctggaaacaaggagacgatttaaaagttttgaaggtgtacatagagttttcc
ctggaccagccaaagggaggtctccactttgttgttcctgacgtggaaggcagcatggcg
gagcggggagctcatgtgttctcctttggataccagaactccaccaggttctggttcccc
tgcgtcgactcctactcggagctgtgcacctggaagctggagttcaccgtggatgcttcc
atggtggctgtgtcctgtggcgatctggtggagactatctacacccatgacatgagaaag
aagacttaccactatgtcctccccatccccaccgcagccccaaacatctccctggctgtg
gggccctttgaaatccttgtagacccctacatgcatgaggtgacccatttttgcctgcca
cagctgctgccactgctcaaacactccatgtcctacctacatgagatttttgagttctac
gaggagattctgacatgccgctacccttattcctgcttcaagactgtgtttgtggacgag
gcctatgtacagctgtcttcctatgcttcaatgagtattttcagtaccaacctgctccac
agcgctacgatcatcgaccagaccccgctgacacggcgctgcctggcccaggccttggct
cagcagttctttggctgtttcatctccaggatgtcatgggctgatgagtgggtgctgaag
ggaatctccggctacatctacggcctctacctaaagaagacatttggagtcaatgagtac
cggcactggatcaaagaggagttggacaagattgtggaatatgaactaaagatgggaggg
gttctgttgcacccaaccttcatcggaggcaaagagaaggacaatccaactccccacctt
cacttctccatcaagcacccccacaccttgtcctgggagtacttcaagatgttccagtgt
aaggcccatctggtgatgaggctgatagaaaacaggatcagcatggagttcatgttacag
gttttcaacaagcttctgagcctggctagcacagcctcatcccagaagtaccagagtcac
atgtggagccagatgcttctgtctactcacgcctttctcaaatccatctcaaacgtctcg
ggcaaagacataggccccctcatcaaacaatgggtagaccaaagttctgtggtgaaattc
tttggcagttttgcctttaacaggaagaggaacgttctcgagctggagatccgtcaggac
tacacatcatctggaactcagaaatatgtgggtccaatcaaagtgacagtgcaggagctg
gacggatccttcaaccacacgctgcagattgaggagaacagcctcaaacatgacattccc
tgtcattccaagagcagacgaaacaagaaaaagaagatccctctgatgaatggagaagaa
gttgacatggatttatcagccatggatgccgactctcctctcctctggatccggattgac
ccagacatgtccattctgaggaaggtggagtttgagcaggcggacttcatgtggcagtat
cagctgcgctatgagagggacgtcgttgcacaggaggaagccatctcagcattggagaag
ttcccaactcctgcctccagactggctctgacagacatcctagagcaagaacagtgtttc
tacaaagtccgcatgcaggcctgcttctgtttggccaagatagccaactccatggtgagc
acgtggcagggcccgccggctatgaagtccctgttcacccgaatgttctgctgtaagagt
tgccccaacattgtcaagaccaacaacttcatcagcttccagagttacttcctgcagaag
acgatgcccgttgccatggcgctacttagagatgtccagaacctctgtcccaaagatgtt
ctcaacttcatccttgacctcatcaagtacaatgacaaccgtaaaaacaaattttcagat
aactactaccgtgcagatctgatcgaagccctgaccaactctctgacccccgccatcagc
atcagcaacgaggtgcgcacagtggacaacctgaacgctgacgtccgtctcatcttggag
gagatcacacgatttctcaacatggagaagctgctgccgagcttcagaaacaccatcact
gtccgttgtctgagtgcgatccgtcagcttcagaggaacggccatattcccagtgacgcg
tccctcttcaagtcctacgctgagtatggacactttgtggatgtgcgcgtcgctgccctg
gaggctctggtggactatactagagttgaaagaagctcagtggagctgcagtggctgctc
aacatggtccagaatgatccagctcattatgtcagacataagatcctgggcatgctcagt
aagaatccacctttcaccaagacaacagactcacctctgtgtaacgaagcactggtcgac
cagctctggaaactaatgaactcaggaacctcccacgactggcggctgcgctgcgatgcc
gtgaacctctactacacgttgttcggtttgactcgaccctcctgccttccattgccagaa
ctgggcctcgtgctcaatctgaaggagaaaaaagctgtcctgaaccccaccatcaagcct
gagctggatgttggccccgttgtggacacccctgccagtatcggcatccatggtgtgggc
atgtgctacgcagctgtggatgaggaaccagatcctatttcattaggggtgtgtggggtg
ggccagccccctcagggcctgaagaggaaggctgagacccccctgggctcccccccagag
ccaggacaggttctgcagcaacaggacgatgatacaagaggaggccacttcaagatccgg
ttcaacacaatggaagatgaagacattgatatggagacggttcatgatagtcaggctttc
attcaccagcatctccatctgttagaaagaccctctacaccaggtaaagagccgccgtca
gtggaacagtccatgctctccatgccggccacacccgtgccgtccttcaccaaagagacg
tcctctttgtcctccaaacacagcggggaacacggccaccaccatcaccaccaccaccat
gagcacaagaagaagaagaagaagcacaaacacaagcacaagcataagcacaaacacgac
agcaaggacaaggagaaggacagagagagggacaactcgcatgcctacagcaacagcccg
gccagcggcaggtccctgcgctcgccctctctgtctgactaa
DBGET
integrated database retrieval system
