Etheostoma spectabile (orangethroat darter): 116690780
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Entry
116690780 CDS
T08457
Symbol
nod1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04621
NOD-like receptor signaling pathway
esp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
116690780 (nod1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
116690780 (nod1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
esp04054
]
116690780 (nod1)
Pattern recognition receptors [BR:
esp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
116690780 (nod1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
LRR_4
WHD_NOD2
AAA_16
NPHP3_N
MRM3-like_sub_bind
AAA_22
AAA_18
RsgA_GTPase
Roc
PIF1
ABC_tran
Motif
Other DBs
NCBI-GeneID:
116690780
NCBI-ProteinID:
XP_032373833
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All DBs
Position
6:24662776..24674172
Genome browser
AA seq
939 aa
AA seq
DB search
MGQIEEARVSCLNTLTYHRELLVSRLRSVQCVLDNLLAAGFVCEEEVEIVQRTVTKPEQV
RKILELVQCKGEEACEYFIYILYKVCDAYIDLQPWLKEINYNPSRDVTLMTVVNTDPISR
YCEKLRHEMIRDTCFIMSYGQREESRLEDLYTDTLMELLNESNESLGFLESLDQLLGNHA
VFNPQGETIYVMGDAGVGKSILLQKLQNLWAKKELQTDAIFFFKFRCRMFNIIKDTEQIS
LRDLLFKYNCCPDQDPDHEVFDYILRFPEKVLFTFDGYDEIQMNDLMNVAEVVSPEAKAH
PLQLLVSLLCGKLLQGSHKVLTARTGTEIQSRVIRKKVALRGFSPAHLKTYIHLHFKAQE
HRELVSVQLDASPHLCSLCSTPLFCWIVFKSFRHLHTMHDSFHLPETGITLTDIFLLLSE
VFLSRSASPAPSLLKRSTRCASDTFKAGLRPLAAFAKLALQVLDRGSFICSQEEISACGL
TEEDLTLGFLRPVSEYDASEGPATFEVLHITLQSFLAAFALVLDEQATPSSILKYFTQCS
RKRDRSCLPFDFCIGGSSKSREKHPFATNDHLQFTNLFLCGLLSKAHSGLMEHLVSPVLL
KKKRALLKSYLSTSVKSHLHGLPHYNGEEGRKVHVLPNFLWMLRCIFETGSKDIAQMTAK
GITAGLIKLGYCNVFSGDCTALNFVLQHRQKLLGLDMDNNNISDYGVMQLRPSFSKMTIV
RLCVNQLSDSSMEVLAEELCKHKVVEVLGLYNNHITDVGAKLVAQIIEKCPKLRVLKFGK
NRITSVGGRFLASAIQRSTSIFDVGMWGNSIGDEGAEAFAEALRHHPSLNNLSLSANSIT
SKGGKCLAEALKENNVLRIFWLVQNELTDEAAPHFAQLVQANTGLSHLWLISNQFTVDGI
KLLAEALTHNTALKEICVKGNQLSEEEEKQFVEKRLRFH
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgggtcagatagaagaagcccgggtgtcgtgcctcaacaccctcacctaccaccgagag
ctgctggtgtccaggctgaggagcgttcagtgcgtcctggacaacctgttggccgctggc
ttcgtctgtgaagaagaagttgagatcgtacagcgaaccgtcaccaagccagagcaggtg
cgcaaaatcctggagttagtccaatgcaaaggggaggaggcctgtgaatactttatttac
atcctttataaagtatgtgacgcatacatagacctgcagccatggctgaaagagatcaac
tacaacccgagcagggatgtcacactgatgacggtggttaacacagatcccatcagcagg
tactgtgagaagctgaggcacgagatgatccgggacacgtgcttcatcatgtcgtacggc
cagcgagaggagagccgcctggaggacctctacactgacacactgatggaactgttgaac
gaaagcaatgagagtttgggcttcttagagagtctggaccagctcctaggaaaccatgca
gtcttcaacccccaaggggaaaccatctatgtgatgggggatgccggtgtgggcaaatcc
atcctcctgcagaagctccagaatctctgggccaagaaagagctgcagacagacgccatc
ttcttctttaagttccgctgtaggatgttcaacatcatcaaggacacagaacagatctcc
ctccgagaccttttgttcaaatacaactgctgtccagatcaagatccagaccatgaggtg
tttgactacatcctgcgcttcccggagaaggttctttttacattcgatggctacgatgag
attcagatgaatgacctgatgaatgttgctgaagtggtgtctccagaagccaaggcacac
cccctccagctgctcgtcagcttgctctgtgggaaactactccagggctcccataaggtg
ctgacggcccggacagggaccgagatccagagtagggtgatcaggaagaaggtggctctg
cgtggcttctccccagctcatctgaagacctacatccatctgcacttcaaggcgcaggag
caccgagagctggtgtcagtccagctggatgctagcccccacctgtgcagcctctgctcc
accccgctcttctgctggattgtgttcaagagttttaggcacctgcacaccatgcatgac
agcttccacctgcctgaaaccggcatcaccctcacggacatcttcctgctgctgtcggag
gtgttcctcagccgctccgcctcgcctgcaccgtccctgctgaagagaagcactcgctgt
gcctcggacaccttcaaagccgggctccggcctctcgcagcatttgccaaactagcactt
caggttttggatagaggtagcttcatttgcagccaagaggagatcagcgcgtgcggcctg
acggaggaggaccttaccctgggctttctccgacccgtcagtgagtacgatgccagtgaa
ggccctgctacatttgaagtccttcacatcaccctccagtctttcctggcggcatttgct
ctggtgttggatgagcaggctactcccagctccatcctcaagtacttcacccagtgcagc
aggaaaagagatcggtcctgtctgccttttgacttctgcatcggtggctcctcaaagtcc
agagaaaagcatccatttgcaactaatgaccaccttcagttcactaatctgttcctgtgt
ggactgctgtccaaggctcacagcggcctgatggagcatctggtgtctcctgtgttatta
aagaaaaaacgggccttactgaagtcctacctttccaccagtgtaaagtcccacctccat
ggcttaccccactacaacggcgaagagggccggaaagttcatgttctgcccaacttcctg
tggatgctgaggtgcatctttgagacagggagcaaagacattgctcagatgacagcgaaa
ggcatcaccgcgggcttaatcaagcttggctactgtaacgtgttctcaggggactgcacg
gccctgaattttgtgctgcagcatcggcagaagctgctgggcctcgacatggacaacaac
aacatcagcgactatggagtgatgcagctgaggccctccttcagtaagatgaccatagtg
agattgtgtgtcaaccagctgtctgacagcagcatggaggtcctggcagaggagctgtgt
aagcacaaagtggtggaggtcttggggctttacaacaaccacatcacagatgttggagcc
aagctggttgctcagatcattgagaaatgtccaaagctgcgagtcctcaagtttggtaaa
aacaggatcactagtgttggtgggaggtttttggccagcgccattcagaggagcacctct
atatttgatgtggggatgtgggggaacagcatcggcgatgagggagcagaagcatttgca
gaagctttgaggcaccaccccagtctgaacaacctcagtctctcagccaacagcatcaca
tctaaaggtgggaagtgcctggcagaagcgctgaaggagaacaacgtcctcaggatcttc
tggttggtgcagaatgagttgactgatgaagcagctccacactttgctcagttggtccag
gcaaacacaggtttatcccacctctggttaatcagcaaccagttcactgtggatgggatc
aaactcctcgccgaggccctgactcacaacacagcactcaaagaaatatgtgtgaaggga
aaccagctctctgaggaggaagagaaacagtttgtggagaagagactgcggttccactga
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