Etheostoma spectabile (orangethroat darter): 116690821
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Entry
116690821 CDS
T08457
Name
(RefSeq) AT-rich interactive domain-containing protein 1A-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116690821
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
esp03000
]
116690821
03021 Transcription machinery [BR:
esp03021
]
116690821
03036 Chromosome and associated proteins [BR:
esp03036
]
116690821
Transcription factors [BR:
esp03000
]
Eukaryotic type
Helix-turn-helix
ARID
116690821
Transcription machinery [BR:
esp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116690821
Chromosome and associated proteins [BR:
esp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116690821
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
116690821
NCBI-ProteinID:
XP_032373882
LinkDB
All DBs
Position
6:5389470..5409168
Genome browser
AA seq
2306 aa
AA seq
DB search
MAAQVASAATLNTSPPSELKKPDRDNKEESVPGEKQSDKKLPGLDSGSPGRGDLQDGADG
RNAGGGGEPEMKNGNGNPPRANNNNQNDSVGPEGNNHPGLVHHHGTAFSPPSYGYSQHYG
RAPFHQHGGQQSPGMAAAAGPVVQSSNMMDPYQPNSHEHGFSNHQFNNYNPFPNRTPYPG
QAYAMNSPRSTQAPTAGGQPANVKQQPPAGGPTAMAGSYSNQRYNIGNPQPTSTPTLNKL
LTSPSATRGYPNYPSNDYSSQEGANKGPADMGSSGLYGGSNPGWQQRSHHPSPMSPGSAG
QPLVRNQPPGPIDPMAKMRGQPYGAGSPYNQQAPQGPPTGPQQGPGYPGQGYGPPGPQRF
PVGMQGRTPGSMGSMSYGPQMGSYGQQGPGGYGSQSQAPYYGQPGQAPHPSQQQTPYSQP
PSVQPGGQTPYPGQTHPPPTSAPHNQGAQPYQQPHMPPQSQGQLPGPSQGPPQSQPPYSQ
TSAPQSGQSLYAQQQGPPNQAPQPPSSQEPAGPQGQSNYPGSTQGPQPPPSQQQQAQSQP
PQQPSGHSQHPQGQPAAYPPNPQQPQQQQAQQSPYQRFPPPQQQEVSQDSFQSSAPPSTQ
PKTGPEDSQGRPSSLPVSFAFRPRDLSGSIDDLPTGAEGALSPGVSTSGVSSSQGEQSNQ
AQSPFSPHTSPHLPGIRGPSPSPAGSPASASTPRTGPLSPANMPVTQMPPRPSSVQSDGS
LHPAMSQSPMAQDRGFMQRNPQMTYGSPQSASALSPRQSSGGQMHPGMGPYQQNNSMGGY
GQQGGQYGPQGYPRQPGYSNMPNANYTGPGIGPMNSMAGQGAGPPYSGMPPGRMPPNQMG
ARPYGPNMGPNMGPNMGPNIPPNMGNMPPQVGSGMCPPPGMNRKPQDPAAMQHPATNSMH
NRMPGYPNMSPGMIGSGPPYGPPMNNMPGMMNTQGGSPYPMGPNMANNSSGMAPSPEVNN
KMNNKVDGSGTPKPEPKSKKSNSSTTTNEKITRLYELGPEPDRKMWVDRYLAFIEEKAMG
MTNLPAVGRKPLDLFRLYMSVKEIGSMAQVSKNKKWRDLATSLNVGTSSSAASSLKKQYI
QCLYAFECKIERGEDPPPEIFTDNKKNQAAKVQPPSPASLCSTAGSGSLQGPQTPQSTSS
SMAEGGDLKPPTPASTPHTQMPPMPPGPRSSVNLQDPFSEGSDPAFPRKNMTPNSAYQAG
MNTPDMQGRMGTYEPNKDPFGNMRKVGEHFLPANQGPNSGVGDQQQQQPPQQQQQQPPFN
RGPPGSIGTMPMGPRQQFPYGPGYDRRSEQGMGPEGNMGSGAPQPNPMIPANADTGMYSP
NRFPPQQPRHDSYGNQYPGQGTPPTGSYPNQQPGMYPQQQQSYKRPVEGGYPPPKRHETE
YSGPFHGGQQPPPQQQPGGTSAPSSGQQEYNQYSGNGPYPGSDRRPPGPGNQFPFPFGRE
RMPVATGPNAQPNMPPQMMQSGPEGPQGGIWQGPRDMNYQSYPSRQGGPGGPPQGPGYPG
MNRSEEMMSSEQRMNHDGQWGGQMGPRQPPYGPAGPGQPMPRSVQPNYQPLQGVQNHIPQ
VSSPASMPRPMDSRTSPSKSPYIHGVMKMQKAGPPVPASHIVPPPVQSPLIRRDMPFPPG
SIEASHPVLKPRRRLTVKDIGTPEAWRVMMSLKSGLLAESTWALDTINILLYDDNSISTF
DLNTLPGLLELVVEYFRRCLIEIFGILREYEVGDPGQRTLLDPDALKQDWDSAEEEQRAE
DMEQEEVDDEEEEERETEGPARVKEEEEEEQDQCTESRGRDEKTEDEERKSKGSSSEQTG
SSQSLAASERPKQASKFDKFPLKVVRKKDPFATSKLNNHGKLQEFDSGLLHWSAGGGDST
DHIQTHFEPRKDFLEPRERVSVPSNLLKQRVPEEMSLENCLPSEEEKRKNQDEEERPKET
ASPEKASSSHSTEEERKTDLETMTVEKVAKIHQENNRPIPFPGSVLTQQAQQTGTILEDE
PHSKDEGPLVALANWQDSLARRCICVSNIIRSLSFVPGNDHEMSKHPGLLLLLGRLILLH
HRHPERKQAPLTYEKDEDSDEGMGQRDEWWWDCLELLRENTLVTLANISGQLDLSIYPES
ICLPLLDGLLHWAVCPSAEAQDPFPTLGPHSALSPQRLVLETLSKLSIQDNNVDLILATP
PFSRLEKLYGNLVRLIGDRKVAVCREMAVVLLANLAQGDTVAARAIAVQKGSVGNLLGFL
EDSLAATQLQQSQSSLLHLQGMHFEPTSPDMMRRAARALHALAKVEENHSEFTLQESRLL
DLSVSPIMNSLVSHVICDVLFLIGQS
NT seq
6921 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgccgcaactcttaacactagcccgccttcggaactcaaa
aaaccggatcgagacaacaaggaggagtcggtaccgggggagaagcagtcagacaaaaag
ctgccgggcttggacagcggatcgccgggccggggagatctgcaggacggggccgacggt
agaaatgcagggggaggaggggaacctgagatgaagaacgggaatgggaacccgcccagg
gctaacaataataaccagaatgactctgtcggaccggagggaaataaccaccccgggttg
gtgcatcaccacggcacggcgttttctccaccttcgtacggatatagtcagcactacggt
cgggccccttttcatcaacatggcggacaacaaagccctggcatggcagctgctgcgggt
ccggtcgttcagtcgagcaacatgatggacccatatcaacctaattcacacgagcatggc
ttttcaaaccaccagtttaacaattacaacccattccctaacaggactccatatcccggc
caagcgtacgccatgaactctcctcgcagtacccaggcgccgacagctggggggcagcca
gctaacgttaagcagcagccaccagcgggaggacccacggcgatggctggatcttacagt
aaccagagatataatattggaaacccacaacctacatccacaccgacactcaacaagctc
ctaacctcccccagcgcaacgcggggatatccaaactatccgtctaacgactacagtagc
caagaaggagctaataagggaccagcagacatgggcagtagcggtctgtatggagggagc
aatccgggttggcaacaaagaagccatcacccgtcgcctatgagcccgggaagtgccggg
cagccactagttagaaaccagccacctggtcctattgacccaatggcaaaaatgagaggt
caaccatacggagcaggcagtccatacaatcagcaggcgccgcaggggcctcccacaggt
ccacaacaggggcccggttaccctggccagggttatggccctccaggtcctcagcgattc
ccagtgggaatgcaaggacgtacccctggaagcatgggtagcatgtcatatggtccacag
atgggatcttatggacagcagggaccagggggctatggttctcagagccaggcaccatat
tacggccagcctggccaggctcctcacccaagccagcagcaaaccccctactcccagccc
ccatcggtgcaaccgggtggccagacaccttacccagggcaaacccaccctccaccgacg
tctgctccacacaaccagggagcacagccctatcagcagcctcacatgcccccacagtcc
caggggcaattgccaggcccatcccaagggcctccacagtctcagcccccttattcccaa
acctcagccccacaatctggccagtctctctacgcccagcaacagggtcctcccaatcag
gccccacagccgccaagttcccaggaacccgctggaccacagggccagtccaactatcca
ggatccacacaggggcctcagccgcccccctcgcagcaacagcaggcacagtctcagcct
ccacagcagccatcgggacacagccaacacccacagggccagcctgcagcatacccgccg
aaccctcagcagccgcaacagcagcaagcacaacagtcaccttatcagcgctttcctcct
ccacaacagcaggaggtatcccaggactcatttcaatccagcgcccctccatccacccag
cccaaaactggcccagaggacagtcaaggccgcccctccagccttccggtcagttttgct
tttcgtcctcgtgacctgtcagggtccatcgatgacctgcctacaggtgctgagggtgcc
ctgagtcctggtgtgagcacgtcaggtgtttcgagcagccagggtgagcagagtaaccag
gctcagtcgcccttctctcctcacacgtctccccacctgccaggcatccgagggccttca
ccttcgccagctggctcccctgccagcgctagcacaccccgcacaggaccgctgtcaccc
gccaacatgccagtgacccagatgcctcccaggccatcaagtgtgcagtcagatgggagt
ctacaccctgcaatgagccagtctcctatggcccaggacagagggttcatgcagagaaac
cctcagatgacttatggctccccccagtcagcctctgcactgtctccacgccagtcttca
gggggacagatgcatcctgggatgggcccatatcagcagaacaactccatgggtggctat
ggacagcagggaggacaatatggcccccaaggttatccccgtcaaccgggctatagcaac
atgcccaacgcaaactacactgggccaggcataggcccaatgaactccatggcaggacag
ggtgcggggccgccatattctggcatgcccccaggaaggatgcctcctaatcaaatgggg
gcacgtccttacggccccaatatgggtccaaatatggggcccaacatgggtccaaacatc
cctcctaacatgggcaacatgccaccccaggtaggctcaggaatgtgtcctcctccaggc
atgaacagaaagccccaggaccccgcagccatgcagcaccctgccaccaactccatgcac
aacaggatgcctggttacccaaacatgtctccaggtatgataggctccggcccaccctat
ggccctcccatgaacaacatgcctgggatgatgaacactcaaggtggatcaccttatcct
atggggccaaacatggccaataactcaagtggtatggcccccagtccagaagtgaacaat
aagatgaataacaaagtagatggtagtggaactcccaagccagagcccaaatctaagaag
tccaactcttcgaccacaaccaatgaaaagataacccgtctgtatgagttaggaccagag
ccagacagaaagatgtgggtggaccgttatttggccttcattgaagagaaagccatgggc
atgaccaacctgcccgctgtaggacgcaaacctctcgacctttttcgtctttatatgtca
gtcaaagagatcggcagcatggcacaggtgagtaagaataagaaatggcgtgatctggcc
acttccctgaatgtgggcacatccagcagtgctgctagttctttgaagaaacagtacatc
cagtgtctgtacgcctttgagtgcaaaattgagcgtggtgaggaccctcctcctgagatt
ttcacagacaacaaaaagaaccaagctgctaaggtccagccaccctctccagcgtccctc
tgctccacagctgggtcaggctctctgcagggtcctcagacaccccagtccaccagcagc
tccatggctgaagggggggacctgaaacctcccactccagcctccactcctcatacccag
atgccccccatgccaccagggcccaggagcagcgttaacctgcaggaccccttctctgaa
ggaagtgaccctgcttttcccaggaagaacatgacgcccaactctgcctatcaggctggc
atgaacacaccagacatgcaaggacgcatgggcacctacgaacccaacaaggaccccttt
ggtaacatgcggaaagtcggggagcactttctacctgccaaccagggcccgaacagcggg
gtgggtgaccaacagcagcagcaaccgccacagcagcagcagcagcagcctccgtttaac
agaggaccgcctgggtccattggcacaatgccaatggggcccagacagcagtttccctat
ggaccaggctacgacaggagatcagagcaaggaatgggcccagagggcaacatgggatcc
ggtgctcctcagccaaaccctatgatacctgccaatgccgacactgggatgtattcgcca
aatcgcttcccaccacagcagccacggcatgattcctatggtaatcagtatcctggacag
ggaacgccccctacaggctcctatcccaatcagcagcctggaatgtacccacagcaacaa
cagagttacaagcgtcctgtggaagggggttatcctccacccaaacgccatgagacggag
tacagtggtcccttccatggtggacaacaaccaccaccgcagcaacagccaggaggtacc
tctgcaccctcttcaggacagcaggagtacaatcagtacagcggcaatggaccctacccc
ggctcggatcgccgtccacctggcccaggcaatcagtttccatttccctttggtcgtgaa
cgtatgccggtagcgacggggcccaacgctcagcccaacatgccccctcagatgatgcag
tcaggccctgagggacctcagggaggtatttggcagggaccgcgagacatgaactatcag
agctaccccagccgacagggtggccctgggggcccaccccagggacccggctaccctggc
atgaaccgctctgaggagatgatgtcatcagaacagcgcatgaatcatgatggacagtgg
gggggtcagatgggcccgcggcagcctccttatggtccagcagggcctggccaacctatg
cctcgttcagtacagcccaactaccagccccttcagggtgtgcagaaccacattccacag
gtgtccagcccggcctccatgccccggcccatggatagcaggacatcacctagtaaatct
ccctatatacacggagtaatgaagatgcagaaggctggccctccagtgcctgcgtctcac
atagtgccccctccggtgcagtcgcctctaataagacgagacatgccttttcccccaggc
tctatagaagcgtcacatcctgtccttaaaccacgtcggagactcacagtgaaagatatt
ggtacccctgaggcctggagagttatgatgtcattaaagtctggtttattggctgagagt
acgtgggccttagataccatcaacattctcctgtatgatgacaacagtatttccaccttt
gatctcaacacgttgcctggcctactagagttggtggttgagtatttcagacgctgtctc
attgaaatctttggtattcttcgggagtatgaggtgggagaccctggccagaggacactg
cttgatcctgatgccttgaaacaagactgggacagtgcagaagaagaacagcgggctgag
gacatggaacaagaagaagtagatgacgaagaagaggaggaaagggaaacggaggggcca
gctcgtgtgaaggaggaggaggaggaggagcaggatcagtgcactgagtctcggggtcga
gatgagaaaacggaagatgaggagaggaagagcaaggggtcttcatctgaacagacgggc
tcatcgcaatccttagctgccagtgagagacccaaacaggccagcaagtttgacaagttt
cctctaaaggtggtacgaaagaaagatccatttgcgactagcaagttaaataatcacggc
aaactgcaagagtttgacagtgggctacttcattggagcgctggaggcggagactcaaca
gaccacatccagactcactttgaaccacgcaaagacttcttggaaccccgagaacgagta
tctgtgccctcaaatttgctgaagcaacgagtcccagaagaaatgtcactggaaaattgt
ttgccatctgaggaggagaaaaggaagaatcaagatgaagaagagaggccaaaagagacg
gcttccccagagaaggccagctcctcacacagcactgaggaggagaggaaaacagatttg
gagacaatgacagttgagaaagttgccaaaattcaccaggagaataatagacctattcct
ttccccggcagtgttttaacccagcaggcacagcagactggcaccatcctggaggatgag
cctcacagtaaagatgaggggccactcgttgcactggctaactggcaggattctttagcc
cgtcgctgcatttgtgtctccaatataatccgcagcctctcctttgtgccaggcaatgac
cacgagatgtccaaacatccagggctactgctgttactgggacgcctgatcctactccac
cacaggcaccctgagcgcaaacaagctccgctcacctacgagaaagatgaggactcggat
gagggaatgggccaaagggatgaatggtggtgggattgcttggagctcctgagggagaac
acactggtcactttggcgaacatctcaggccaactggacctctccatttacccagagagc
atctgcttgcctctgttggatggtcttctccactgggctgtctgcccgtcagcagaggcc
caggaccccttccccaccctcggcccccacagtgctttgtcacctcagagactggttctg
gagacactaagcaagctaagcattcaagataacaatgtggacctcatcttggccactccg
ccattcagtcggttggagaagctatatgggaaccttgtgcggctaatcggagacaggaag
gttgcggtctgcagggagatggccgtggtcctactggccaacctggcccagggtgatact
gtggcagccagagcaatcgctgttcagaaaggcagtgtgggcaacctgctgggcttccta
gaagatagtctggctgccacacagctccagcagagccagagctctctactacacctacag
gggatgcacttcgagcccacaagcccggacatgatgcggcgagctgctcgggctctgcac
gccttagccaaggtggaggagaaccactcagagttcacactacaagagtcccgactcctc
gacctttcagtgtctcccataatgaactcactggtttctcatgttatctgtgatgtactc
tttttgattggccagtcatga
DBGET
integrated database retrieval system
