Etheostoma spectabile (orangethroat darter): 116690845
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Entry
116690845 CDS
T08457
Symbol
cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
esp
Etheostoma spectabile (orangethroat darter)
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
esp03016
]
116690845 (cdkal1)
Enzymes [BR:
esp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
116690845 (cdkal1)
Transfer RNA biogenesis [BR:
esp03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
116690845 (cdkal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TraT
TRAM
Motif
Other DBs
NCBI-GeneID:
116690845
NCBI-ProteinID:
XP_032373934
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Position
6:complement(4094979..4369603)
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AA seq
564 aa
AA seq
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MPSACDSLVEDIEDMVSSTDPTPNERQSARKSIVPRSRKKNESLIHEELHADSLIPGTQK
IWMKTWGCSHNNSDGEYMAGQLAASGYKMTDDPTDADLWVLNSCTVKNPAEDHFRNSIKK
ALEQQKKVVVAGCVPQAQPRMDYLKGLSIIGVQQIDRVVEVVDEAVKGHSVRLLGQKKDG
GRRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGDLASYPIEELVERARQS
FQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWRLVEEIPEGAMLRLGMTNPPYILEHLEEM
AKILNHPRVYAFLHVPVQSASDSVLMDMKREYCIDDFKKVVDFLKERVPGVTIATDLICG
FPGETEEDFQETVDMVKLYRFPSLFINQFYPRPGTPAAKMEQVPAHVKKQRTKELSQLFH
SYNPYDHKVGERQHVLVTEESFDAQYYVSHNKFYEQVLVPKRAEFKGKMIEVDIYEAGKH
FLKGRPVEESMPFTPSIAAPLQKGEVSGLMQHQTPNGIQGPSSMPSSSVLLIGSYSLDRE
VLKKLGIGLTLAAAILAFIVEKLY
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgccatctgcctgtgactctctggttgaagacattgaggacatggtgtcctctactgac
ccaactcctaatgagagacagtccgctagaaagagtattgtaccaaggtccaggaagaaa
aacgagagtctgatccatgaggagctccatgctgacagtttaatccctggcacccaaaaa
atctggatgaaaacgtggggctgcagtcataacaactcagatggagagtacatggccgga
cagctagctgccagcggatacaagatgactgatgacccaacagacgcagacctgtgggtg
ctgaacagctgcactgtgaaaaaccctgcagaggaccacttcagaaactcaatcaaaaaa
gccctagaacagcagaagaaggtggtagtagctggttgtgtcccccaggctcagccacgg
atggactacctcaaaggactcagcatcattggggtccaacagattgatcgagtggtggaa
gtagtggacgaggctgttaaaggccactcagttcgtctgttgggtcagaagaaagatgga
ggccggaggctcggaggagccagactggacctgcccaagatcaggaagaaccctcttatt
gaaatcatctctatcaacactgggtgtctgaatgcatgtacgtactgtaaaactaagcat
gccagaggagacctggccagctatcccatcgaggagcttgttgagagagccaggcaatcg
ttccaggagggagtgtgtgagatctggttgaccagtgaagacacaggagcttatggtaga
gacatagggacagacctgcccacattgctgtggagattggtggaggagattcctgaagga
gccatgctgaggctgggtatgaccaacccaccatatattctggaacacctagaggagatg
gctaagatattgaatcatccacgcgtctatgccttccttcatgttcctgtgcagtcggcc
tctgacagcgtcctgatggacatgaagagagagtattgcattgatgacttcaaaaaagtg
gtggacttccttaaagagagggtcccaggtgttaccattgctacagatttaatctgcggt
tttcctggtgagacagaggaagacttccaagagacagtagacatggtgaaactgtaccga
ttccccagtctcttcatcaaccagttctaccccagacccggtacacctgctgccaagatg
gagcaagtaccagcacatgtgaagaagcagaggactaaagagctgtcccaactcttccac
tcttacaacccctacgaccataaggtaggggagaggcaacatgtgttggtaacagaggag
tcctttgatgcccaatactatgtgtctcacaacaagttctatgaacaggtgctggtacct
aaaagggctgagttcaaagggaagatgattgaggtggacatctacgaggcaggaaaacac
ttcttgaaaggccggccggtggaagagagtatgcccttcactccctccattgccgcaccg
cttcagaaaggagaggtgtccggcctgatgcagcatcagacgcccaatggcatccaaggt
ccttcttctatgccttcttcatctgttttgttgatcggctcttacagtcttgacagggaa
gtactgaagaagctggggatcgggctcactctggcagcagccatcttggccttcatcgta
gagaaactgtactga
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