Etheostoma spectabile (orangethroat darter): 116690905
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Entry
116690905 CDS
T08457
Symbol
sntb1
Name
(RefSeq) beta-1-syntrophin
KO
K24064
beta-syntrophin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116690905 (sntb1)
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Gene cluster
GFIT
Motif
Pfam:
Syntrophin_4th
PH_17
PDZ
PH
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
116690905
NCBI-ProteinID:
XP_032374017
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Position
6:4748439..4802784
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AA seq
546 aa
AA seq
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MAVVIATGVSGASGVQKSGFVEVLVREQWHKVLVILNEEALTLSCEESCVNDNVIDNVNS
NGVTNGSYFDNNNTNSNNGPQTVRTAFTDLPERVPEAIANRKRCVKVTKQEIGGLGISIK
GGKENKMPILISKIFQGLAADQTQALYVGDAILSVNGVNLRDATHDEAVQALKRAGKEVT
LEVKYMREATPYVKKGSPVSEIGWETPPPDSPRLCSSPITSSSEPPSSPAQPSLSLQGDR
RCIPLKMCCVTRAMTTPDPENRQLELHSPDARHTVVLRCSDQPSALSWFTAMHTVTSTLA
QRALAEVIQNTARTGVAGSKEIRHLGWLAGKTESEKQCWKPVLVVLTEKDLLLYETLPRG
KEAWQSPAHTYPLLATRLVHSGPDRGSPHSGTELFFATRTGTRLGIETHLFRAETTKDLS
LWTRHIVNGCHASAEMIKEVTTSCLYQSQECRLVIHYEQGFSVLADPKLGDGEERGAHTP
TRPRVLLSYPYEKLKLSSDDGVRMLFLDFGGKEGEIQLDLHSCPKPIVFILHSFLSAKIS
RLGLVA
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggtaatagcgactggagtttcaggtgcctccggagtgcaaaaaagtggattt
gttgaggttttggtgcgggagcaatggcacaaagttttggtcatcttaaacgaggaagcg
cttacgttaagttgcgaggaaagctgcgttaacgacaacgtgatcgacaatgtcaactcc
aacggcgttaccaacggatcttactttgacaacaataacaccaactccaacaacggcccc
caaactgtgcgcaccgcgttcacggacctcccggagcgagtgcccgaggcgatcgccaac
agaaagcggtgcgttaaggtgaccaagcaggagatcggggggcttgggatcagcatcaaa
ggtgggaaggagaataaaatgcctatcctcatcagtaagatattccaggggctcgcagcg
gaccagacccaggctctgtatgtcggggacgccatcctgtcagtgaacggcgtgaacctg
cgggacgcgacccacgacgaggctgtgcaggcgctaaaacgggccgggaaagaggtgaca
ctggaagtgaagtacatgcgcgaggccacaccgtacgtgaaaaagggctcccctgtgtct
gagatcggctgggaaacaccccctcctgattctccccgtctctgcagctctcccatcacc
tcctcatctgaacctccgagctctcctgcccagccctccctgtctctgcagggcgacagg
aggtgcataccactcaagatgtgttgtgtaacccgagccatgaccacaccagaccctgag
aacagacaactggagttgcactcccctgatgctaggcacaccgtggtgctgcgttgctca
gaccaaccatctgccctgtcctggttcactgccatgcacactgtcacatccacactggca
cagcgggcgctggcagaggttatccagaacacagccaggactggagtagctggcagcaaa
gaaatacgacacctgggatggctggctgggaagacagagagtgagaagcagtgctggaag
ccggtgctggtggttttgacggagaaagaccttcttctgtatgagactttaccacgaggc
aaggaggcctggcagagccctgcacatacctatccactcttagcaacgcgtctggtacac
tctggccctgaccgggggtcgcctcattctggtacagagctgttctttgccactcggact
ggcacacgactcggcatcgagactcacctgttccgtgctgagaccaccaaggatctgtcc
ctctggactagacacatagtcaacggatgtcatgcctcagctgagatgatcaaagaagtc
acgacgagttgtctttaccagagtcaagagtgccggctggtgattcactacgaacagggc
ttctctgtgctggctgaccccaaactgggagacggggaggagaggggcgctcacacaccc
accaggccccgagtgctcctctcctacccctacgaaaaactaaagttgtcctcagatgac
ggagtccgcatgctattccttgacttcggcgggaaggagggggagattcaactggacctc
cactcttgtcctaagccgatcgtctttatcctccactccttcctctctgctaagatctcc
cgcctgggtctggtggcctga
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