Etheostoma spectabile (orangethroat darter): 116691005
Help
Entry
116691005 CDS
T08457
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
esp
Etheostoma spectabile (orangethroat darter)
Pathway
esp04510
Focal adhesion
esp04512
ECM-receptor interaction
esp04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
esp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
116691005
04518 Integrin signaling
116691005
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
116691005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
esp00536
]
116691005
Glycosaminoglycan binding proteins [BR:
esp00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
116691005
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
EGF_Teneurin
EGF_TEN
Fn3_Dep-1_3rd
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_Dep-1_2nd
EGF_2
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
116691005
NCBI-ProteinID:
XP_032374195
LinkDB
All DBs
Position
6:complement(6877936..6885023)
Genome browser
AA seq
1205 aa
AA seq
DB search
MLFILGLLLLLTPLPSFQSPTNERRNSTGSDATKPNPVFTLLKPKTTAALAKQTIRPTLK
PNTVNQTVLSTPAVKASTVSEVKATKDKPAITVVQNVQSTSPKSAPTSGAKTTKNKPTAS
VNQTVVAKSPSTKDKTAPTVVQTALSTPAKAASAGGSAADKDKVMSSSNHSTVIKAPIAT
TTKEKPALAQPIKVVISDGCDSSKANEQELKLKPGVPLVMTHKISLLPGGCTGGCEAEMS
ALKGRVARLEREMSSIKEKCPCSANCPNDCSGNGECEKGKCICQQGFMGPDCSKCAQGAE
CNTKATKGKVKVAVETVSLQVNKDKENMQEKSTRVEHTLFQKKEQKKGSEAKETNTKPKV
VTNAKAGLVKTQAKQEASVKKIMIKDTSSSTKTSRPTVGQVLLKHEGRKQEEARKGKTTV
LTSKKVLQKTDLKLVEEGTVSKTQPKSDQLKDEPQTNVTHSNVKKSNGTAKIETILTKVV
GTNKTRTGKETLEQSTLTEKNGTQSSRHKRIKKVKVDTIDVQSVDNKNTEAGKIGKEKIA
QKSQYLVNSTVAATSGETQALQNKTTIHSSGSAKRIGGSGLGSVKVVNVSSYSFTVIWSA
PQGMFKNFTVIRREPRTEGDEDDHEEFEEEALEGDKATTAKNATEVQVQRESTNTTATSS
KAVVSRGKSETRRISMVVPGSVRSVEFSNLRANTGYVLHVYGTAAERRSKIHRATAVTGP
EPATEMVFSNVTESSLTVSWSKPKTTFSGFRVTYTNIITGESRFVAVASKQSHVVLSKLS
AGSSYIITLTTTQGRAQSDTLTSLITTVPAPPTHLQVVNVTDTRAVLQWTPSLGKVDRFI
ISYESSKTPNVTVTVMLSGNSVEHQLRGLQRGTLYTVKVLSQKDSLQSMAISTTFATANV
VKASEVGPRSAVIAWRTTTVVYNSYRLIYHVAGEKTKEVILDQSITEYKLTGLLPMSRYF
VLVQGEKDGQYTSVVTTEFLTGQLRFPFPTECSQELLNGALQSGEVDIYPQGKEGGAVRV
YCDMETDGGGWTVFQRRMNGKTDFYRTWSEYSVGFGNLSEDFWLGNELLHNLTSAGPVSL
RVDMRSGNNTAYAHYANFSIDSVEKYYTLTVSGFTGTAGDSMRYHNGRPFSTWDKDSDPL
GIHCAKAYMGGWWYKNCYKTNLNGLYGINSNNQGIVWIDWKGKDSSIPFAEMKFRPSRFS
PATHG
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgctgtttattctaggacttctcctccttctcaccccattaccctcctttcaatccccg
actaatgaaaggagaaactccacaggaagcgacgccaccaaacccaatcctgtttttacc
ctgttaaaaccaaaaaccactgctgctctagccaaacagaccattcgcccgaccctgaag
ccaaacacagtcaatcagactgttttatccactccagcagtaaaggcttccacagttagt
gaagtcaaagctaccaaagacaagcctgccatcactgtagttcaaaatgttcagtcaaca
tccccaaagtctgctcccaccagtggcgctaaaaccaccaaaaacaagcccacagcctct
gtcaatcagactgttgtagctaaatccccctccaccaaagacaagactgcccccacagta
gttcaaactgctctgtcaacaccagcaaaggccgcttcagctggtggctctgcagccgac
aaagataaggtcatgtcctcttccaatcatagtactgtaatcaaagctcccattgccacc
actacaaaagaaaagccagcccttgcacaaccaatcaaggtggttatcagcgatggctgt
gactcaagcaaagccaatgagcaggagctgaaactgaagcctggcgttcctctggtgatg
acgcataagatcagcttgttgcctggtggctgcaccgggggatgtgaagctgagatgtct
gcactgaaaggacgtgtggcccgactagaaagagagatgtcctccattaaagaaaaatgt
ccatgttctgcaaattgtccaaatgactgtagtggcaatggggaatgtgagaagggaaaa
tgtatctgccaacagggattcatgggtccagactgcagtaagtgtgcacaaggagctgag
tgtaatacaaaagccaccaaaggaaaagtcaaagtagctgttgaaacagtgagcctgcag
gtgaacaaagacaaggaaaatatgcaagagaaatccaccagagtagagcacacactcttc
cagaagaaagagcagaagaaggggtctgaagccaaagagaccaacactaaacccaaagtg
gttactaatgctaaagcaggtcttgttaaaacacaagcaaaacaagaagcctcagtcaaa
aaaattatgattaaagacacttcaagttccacaaagaccagtcgcccaactgttggtcaa
gttctcttgaaacatgagggaagaaagcaggaagaggcccgcaaaggcaaaacaacagtc
ctcacctcaaaaaaggtcctccaaaaaacagacctcaagcttgttgaggaaggaactgtc
agtaaaacacaacctaaatctgaccaacttaaagatgaacctcaaaccaatgtaacccat
agtaatgtgaagaaatccaatggtaccgctaaaattgagaccattctgaccaaggttgtg
ggaacaaacaaaaccagaacagggaaggagacattagagcagtccacactgactgagaag
aatggtactcaatcatctagacataaacgcatcaagaaggtcaaagtagacactatagat
gtgcaatccgttgacaacaaaaacactgaagctggcaaaattggaaaagagaaaattgca
cagaagagtcagtatctagttaattcaaccgttgcagcaacatcgggcgagactcaagcc
ctgcagaataaaacaactatccatagctctgggagcgcaaagaggataggaggatctgga
ttaggttctgtaaaggttgtgaatgtctcctcctacagcttcactgtcatatggtcagca
ccgcaagggatgtttaagaacttcacagttatccgaagagaaccccggacagagggtgac
gaagacgaccatgaagagtttgaagaggaagctcttgaaggagacaaggccaccacagct
aagaatgcaactgaggtccaggtacagcgcgagagcacaaacaccactgccacctccagt
aaagctgtcgtatcgcgtggcaaatctgaaacaaggaggatctctatggtggtccctggc
agcgtacgctctgtggagttcagtaaccttcgggcaaacacaggctatgtcctgcatgtg
tatggcactgcagctgagaggagatcaaagattcatagagcaactgcagttacaggtcct
gagccagccacagagatggttttcagcaatgtaacagagtcatctctcactgtttcttgg
tccaaaccaaagaccacattctcaggctttagggtcacgtacaccaacataatcacaggg
gagagccgttttgtagccgtggcgtctaaacaatcccacgtggttctgtccaagctctct
gctggatcctcctacattatcaccctaactactacccaaggcagagcccaaagtgacact
ctcacatctcttatcaccacagtgcccgcccctccaacacatctgcaagttgtcaatgtg
accgataccagagctgtgctgcaatggacacccagtctggggaaagtggaccgcttcatc
atcagctatgagtcctccaagactcctaatgtaacagtgacagtgatgctgtctggaaac
tcagtagagcaccagctgagaggcctgcagaggggcaccctgtacacagtcaaagtcctg
agccagaaggacagtctgcagagcatggccatctcaactacatttgctactgccaatgtg
gttaaagccagtgaggtaggtcctcgctctgcagtcatagcatggagaactaccactgtt
gtttataacagctacagactgatctatcatgtggcaggagaaaagacaaaggaggtgatc
ctggaccaatctatcacagagtataagctgacagggctgttgccaatgtcacgttatttt
gttctggttcaaggcgagaaagacgggcagtacacatctgttgtcaccacagaattcctc
acaggccaactgcgtttccctttccctaccgagtgctctcaggagctgctgaacggagct
ctgcagtcaggagaggtggatatctacccgcagggaaaagagggaggagcagtcagagtc
tactgtgacatggagactgatggaggtggctggacggtgttccagaggaggatgaacgga
aagacagatttctacagaacctggagtgaatacagcgttggctttggaaacctcagcgaa
gatttctggctcggaaatgagcttcttcataacctgactagtgccggccctgtgagtctg
agagtagatatgcgatctggaaacaacaccgcttacgctcactacgccaacttctccatt
gattcagtggagaagtactatactctcacagtgtctggcttcacaggaactgcaggcgac
tctatgagataccataatggacgcccattctcaacctgggacaaggactctgatcctcta
gggatccattgtgccaaggcctacatgggaggctggtggtacaagaactgctacaagacc
aacctcaatggtctttatggcatcaacagtaataatcagggaatagtctggatcgactgg
aaaggtaaagactcttccattccctttgctgagatgaagttcagaccgtccaggttctct
cctgcaactcatggctaa
DBGET
integrated database retrieval system
